RNA–Protein interactions for RNA: YMR030W

RSF1, Transcript of Protein required for respiratory growth, yeastyeast

Gene RSF1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSF1YMR030W MTC1P47018 478 aaKnown RBP18.19■□□□□ 0.5
RSF1YMR030W DRS1P32892 752 aaKnown RBP17.43■□□□□ 0.38
RSF1YMR030W FAP1P53971 965 aa15.9■□□□□ 0.14
RSF1YMR030W DIP2Q12220 943 aaPredicted RBP15.13■□□□□ 0.01
RSF1YMR030W PRI1P10363 409 aa15.1■□□□□ 0.01
RSF1YMR030W ISW2Q08773 1120 aa14.96□□□□□ -0.01
RSF1YMR030W AAD16Q02895 342 aa14.94□□□□□ -0.02
RSF1YMR030W PRY3P47033 881 aa14.93□□□□□ -0.02
RSF1YMR030W RPG1P38249 964 aaKnown RBP14.84□□□□□ -0.03
RSF1YMR030W AVT3P36062 692 aa14.7□□□□□ -0.06
RSF1YMR030W BFR2Q06631 534 aaKnown RBP14.69□□□□□ -0.06
RSF1YMR030W RSE1Q04693 1361 aaKnown RBP14.48□□□□□ -0.09
RSF1YMR030W TSR3Q12094 313 aaKnown RBP14.33□□□□□ -0.12
RSF1YMR030W YCK3P39962 524 aa14.15□□□□□ -0.14
RSF1YMR030W RPL17AP05740 184 aaKnown RBP14.03□□□□□ -0.16
RSF1YMR030W RPL17BP46990 184 aaKnown RBP14.03□□□□□ -0.16
RSF1YMR030W HAA1Q12753 694 aaKnown RBP13.99□□□□□ -0.17
RSF1YMR030W REB1P21538 810 aa13.91□□□□□ -0.18
RSF1YMR030W MRPL32P25348 183 aa13.72□□□□□ -0.21
RSF1YMR030W SPT21P35209 758 aa13.44□□□□□ -0.26
RSF1YMR030W TFA1P36100 482 aa13.22□□□□□ -0.29
RSF1YMR030W YKR023WP36119 530 aaKnown RBP13.22□□□□□ -0.29
RSF1YMR030W CDC27P38042 758 aa13.16□□□□□ -0.3
RSF1YMR030W RIM101P33400 625 aa13.07□□□□□ -0.32
RSF1YMR030W YGL015CP33199 130 aa13.03□□□□□ -0.32
RSF1YMR030W HOP09932 586 aa12.96□□□□□ -0.33
RSF1YMR030W TFC8Q12308 588 aa12.93□□□□□ -0.34
RSF1YMR030W DCD1P06773 312 aa12.9□□□□□ -0.34
RSF1YMR030W MAP2P38174 421 aaKnown RBP12.68□□□□□ -0.38
RSF1YMR030W OXP1P28273 1286 aa12.67□□□□□ -0.38
RSF1YMR030W UBP10P53874 792 aaPredicted RBP12.66□□□□□ -0.38
RSF1YMR030W BCH2P36122 765 aa12.53□□□□□ -0.4
RSF1YMR030W SCY1P53009 804 aa12.5□□□□□ -0.41
RSF1YMR030W YIL055CP40523 627 aaKnown RBP12.45□□□□□ -0.42
RSF1YMR030W PTP3P40048 928 aa12.42□□□□□ -0.42
RSF1YMR030W YAH1Q12184 172 aaKnown RBP12.36□□□□□ -0.43
RSF1YMR030W SLX5P32828 619 aaKnown RBP12.29□□□□□ -0.44
RSF1YMR030W RSM7P47150 247 aa12.27□□□□□ -0.45
RSF1YMR030W EPS1P40557 701 aa12.25□□□□□ -0.45
RSF1YMR030W BDF1P35817 686 aa12.19□□□□□ -0.46
RSF1YMR030W YLR271WQ06152 274 aa12.16□□□□□ -0.46
RSF1YMR030W AI2P03876 854 aa12.13□□□□□ -0.47
RSF1YMR030W TIF4632P39936 914 aaKnown RBP12.13□□□□□ -0.47
RSF1YMR030W SSP1P38871 571 aa12.1□□□□□ -0.47
RSF1YMR030W TGL3P40308 642 aa12.08□□□□□ -0.48
RSF1YMR030W BBC1P47068 1157 aa12.08□□□□□ -0.48
RSF1YMR030W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.95□□□□□ -0.5not detected
RSF1YMR030W PSD2P53037 1138 aaKnown RBP11.91□□□□□ -0.5
RSF1YMR030W CST9Q06032 482 aa11.76□□□□□ -0.53
RSF1YMR030W BUD31P25337 157 aaPredicted RBP11.75□□□□□ -0.53
RSF1YMR030W MGA2P40578 1113 aa11.75□□□□□ -0.53
RSF1YMR030W MRM1P25270 412 aa11.72□□□□□ -0.53
RSF1YMR030W NSR1P27476 414 aaKnown RBP RIP-Chip data11.66□□□□□ -0.54not detected
RSF1YMR030W MST1P07236 462 aa11.63□□□□□ -0.55
RSF1YMR030W YOR238WQ08634 303 aa11.63□□□□□ -0.55
RSF1YMR030W YAP5P40574 245 aa11.6□□□□□ -0.55
RSF1YMR030W UBP9P39967 754 aa11.56□□□□□ -0.56
RSF1YMR030W RTG3P38165 486 aa11.48□□□□□ -0.57
RSF1YMR030W VPS29P38759 282 aa11.46□□□□□ -0.57
RSF1YMR030W PIB1Q06651 286 aa11.45□□□□□ -0.58
RSF1YMR030W RCR1P38212 213 aa11.44□□□□□ -0.58
RSF1YMR030W YBL029C-AQ3E756 94 aa11.4□□□□□ -0.58
RSF1YMR030W YMR1P47147 688 aaKnown RBP RIP-Chip data11.38□□□□□ -0.59not detected
RSF1YMR030W DBP1P24784 617 aaKnown RBP11.34□□□□□ -0.59
RSF1YMR030W GTT3P39996 337 aa11.34□□□□□ -0.59
RSF1YMR030W YFR006WP43590 535 aa11.34□□□□□ -0.59
RSF1YMR030W STS1P38637 319 aa11.32□□□□□ -0.6
RSF1YMR030W WSC3Q12215 556 aa11.32□□□□□ -0.6
RSF1YMR030W VNX1P42839 908 aa11.3□□□□□ -0.6
RSF1YMR030W SIS1P25294 352 aaKnown RBP11.24□□□□□ -0.61
RSF1YMR030W RAM2P29703 316 aa11.21□□□□□ -0.61
RSF1YMR030W SPP1Q03012 353 aa11.18□□□□□ -0.62
RSF1YMR030W VMA1P17255 1071 aaKnown RBP11.17□□□□□ -0.62
RSF1YMR030W TIF11P38912 153 aaKnown RBP11.12□□□□□ -0.63
RSF1YMR030W YOL036WQ08206 761 aa11.1□□□□□ -0.63
RSF1YMR030W MAK11P20484 414 aaKnown RBP11.08□□□□□ -0.64
RSF1YMR030W SET4P42948 560 aa11.08□□□□□ -0.64
RSF1YMR030W SAM3Q08986 587 aa11.08□□□□□ -0.64
RSF1YMR030W MSB4Q12317 492 aa11.06□□□□□ -0.64
RSF1YMR030W ULI1P43604 169 aa11.04□□□□□ -0.64
RSF1YMR030W IOC2Q12072 812 aa11□□□□□ -0.65
RSF1YMR030W MIF2P35201 549 aa10.99□□□□□ -0.65
RSF1YMR030W EAP1P36041 632 aaKnown RBP10.97□□□□□ -0.65
RSF1YMR030W EDS1P38073 919 aa10.97□□□□□ -0.65
RSF1YMR030W GYP5Q12344 894 aa10.96□□□□□ -0.65
RSF1YMR030W LDB19Q12502 818 aa10.96□□□□□ -0.65
RSF1YMR030W TRP5P00931 707 aaKnown RBP10.95□□□□□ -0.66
RSF1YMR030W COQ8P27697 501 aa10.95□□□□□ -0.66
RSF1YMR030W PTC3P34221 468 aaKnown RBP10.89□□□□□ -0.67
RSF1YMR030W FKH1P40466 484 aa10.89□□□□□ -0.67
RSF1YMR030W DCW1P36091 449 aa10.88□□□□□ -0.67
RSF1YMR030W AIR2Q12476 344 aaKnown RBP10.87□□□□□ -0.67
RSF1YMR030W ABP1P15891 592 aaKnown RBP10.85□□□□□ -0.67
RSF1YMR030W GRE2Q12068 342 aaKnown RBP10.85□□□□□ -0.67
RSF1YMR030W HTA1P04911 132 aaKnown RBP10.83□□□□□ -0.68
RSF1YMR030W HTA2P04912 132 aa10.83□□□□□ -0.68
RSF1YMR030W RTG1P32607 177 aa10.82□□□□□ -0.68
RSF1YMR030W ATH1P48016 1211 aa10.8□□□□□ -0.68
RSF1YMR030W YNL035CP53962 389 aaKnown RBP10.79□□□□□ -0.68
RSF1YMR030W GUT1P32190 709 aa10.77□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms