RNA–Protein interactions for RNA: YML061C

PIF1, Transcript of DNA helicase, potent G-quadruplex DNA binder/unwinder, yeastyeast

Gene PIF1, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PIF1YML061C SGS1P35187 1447 aa9.42□□□□□ -0.9
PIF1YML061C RQC2Q12532 1038 aaKnown RBP9.36□□□□□ -0.91
PIF1YML061C SSN2P38931 1420 aa9.02□□□□□ -0.96
PIF1YML061C INO80P53115 1489 aa8.97□□□□□ -0.97
PIF1YML061C SPA2P23201 1466 aaKnown RBP8.92□□□□□ -0.98
PIF1YML061C TCB3Q03640 1545 aaKnown RBP8.88□□□□□ -0.99
PIF1YML061C DRS1P32892 752 aaKnown RBP8.85□□□□□ -0.99
PIF1YML061C TFA1P36100 482 aa8.82□□□□□ -1
PIF1YML061C TY1B-DR4Q07793 1604 aa8.78□□□□□ -1
PIF1YML061C TAF7Q05021 590 aa8.74□□□□□ -1.01
PIF1YML061C HSL1P34244 1518 aa8.73□□□□□ -1.01
PIF1YML061C SPT6P23615 1451 aaKnown RBP8.72□□□□□ -1.01
PIF1YML061C MON2P48563 1636 aaPredicted RBP8.67□□□□□ -1.02
PIF1YML061C XRN1P22147 1528 aaKnown RBP8.63□□□□□ -1.03
PIF1YML061C SWR1Q05471 1514 aa8.62□□□□□ -1.03
PIF1YML061C HIR3P47171 1648 aa8.59□□□□□ -1.03
PIF1YML061C TAF2P23255 1407 aa8.58□□□□□ -1.04
PIF1YML061C REV3P14284 1504 aa8.43□□□□□ -1.06
PIF1YML061C DNA2P38859 1522 aa8.41□□□□□ -1.06
PIF1YML061C BFR2Q06631 534 aaKnown RBP8.32□□□□□ -1.08
PIF1YML061C SKI3P17883 1432 aaKnown RBP8.31□□□□□ -1.08
PIF1YML061C ECM5Q03214 1411 aa8.31□□□□□ -1.08
PIF1YML061C SSK2P53599 1579 aa8.28□□□□□ -1.08
PIF1YML061C THO2P53552 1597 aaKnown RBP8.27□□□□□ -1.09
PIF1YML061C SAS10Q12136 610 aaPredicted RBP8.27□□□□□ -1.09
PIF1YML061C RSE1Q04693 1361 aaKnown RBP8.26□□□□□ -1.09
PIF1YML061C KOG1P38873 1557 aa8.24□□□□□ -1.09
PIF1YML061C SIN3P22579 1536 aa8.23□□□□□ -1.09
PIF1YML061C BUD4P47136 1447 aa8.23□□□□□ -1.09
PIF1YML061C ESP1Q03018 1630 aa8.22□□□□□ -1.09
PIF1YML061C STU1P38198 1513 aa8.18□□□□□ -1.1
PIF1YML061C ATG2P53855 1592 aa8.17□□□□□ -1.1
PIF1YML061C BPT1P14772 1559 aa8.14□□□□□ -1.11
PIF1YML061C MMS22Q06164 1454 aa8.13□□□□□ -1.11
PIF1YML061C MYO2P19524 1574 aaKnown RBP8.13□□□□□ -1.11
PIF1YML061C MDS3P53094 1487 aa8.09□□□□□ -1.11
PIF1YML061C POL1P13382 1468 aa8.08□□□□□ -1.12
PIF1YML061C YPK9Q12697 1472 aa8.07□□□□□ -1.12
PIF1YML061C PEP1P32319 1579 aa8.06□□□□□ -1.12
PIF1YML061C SCC2Q04002 1493 aa8.04□□□□□ -1.12
PIF1YML061C UFD4P33202 1483 aa8.03□□□□□ -1.12
PIF1YML061C RKR1Q04781 1562 aa8.03□□□□□ -1.12
PIF1YML061C YTA7P40340 1379 aa8.01□□□□□ -1.13
PIF1YML061C URN1Q06525 465 aaKnown RBP8□□□□□ -1.13
PIF1YML061C IFH1P39520 1085 aa8□□□□□ -1.13
PIF1YML061C CHD1P32657 1468 aa7.97□□□□□ -1.13
PIF1YML061C YOR1P53049 1477 aa7.96□□□□□ -1.14
PIF1YML061C RPO31P04051 1460 aa7.95□□□□□ -1.14
PIF1YML061C STH1P32597 1359 aa7.94□□□□□ -1.14
PIF1YML061C TOP2P06786 1428 aaKnown RBP7.93□□□□□ -1.14
PIF1YML061C TRM732Q03496 1420 aa7.92□□□□□ -1.14
PIF1YML061C YCF1P39109 1515 aaKnown RBP7.92□□□□□ -1.14
PIF1YML061C TY2B-LR1P0C2J3 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-FP0CX63 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-GR2P0CX64 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-CP25384 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-DR2Q03494 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY1B-DR1Q03855 1755 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-DR3Q07791 1770 aaKnown RBP7.9□□□□□ -1.14
PIF1YML061C TY2B-OR1Q12113 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-DR1Q12472 1770 aa7.9□□□□□ -1.14
PIF1YML061C TY2B-OR2Q12501 1770 aa7.9□□□□□ -1.14
PIF1YML061C MTC1P47018 478 aaKnown RBP7.88□□□□□ -1.15
PIF1YML061C TY1B-DR3Q99231 1755 aa7.87□□□□□ -1.15
PIF1YML061C SNQ2P32568 1501 aaKnown RBP7.87□□□□□ -1.15
PIF1YML061C SMC4Q12267 1418 aa7.86□□□□□ -1.15
PIF1YML061C MYO4P32492 1471 aa7.84□□□□□ -1.15
PIF1YML061C SSM4P40318 1319 aa7.84□□□□□ -1.15
PIF1YML061C TY2B-BQ12491 1770 aa7.83□□□□□ -1.16
PIF1YML061C IKI3Q06706 1349 aaKnown RBP7.82□□□□□ -1.16
PIF1YML061C PDR15Q04182 1529 aaKnown RBP7.81□□□□□ -1.16
PIF1YML061C SPP41P38904 1435 aa7.8□□□□□ -1.16
PIF1YML061C GEA1P47102 1408 aaPredicted RBP7.78□□□□□ -1.16
PIF1YML061C MLP2P40457 1679 aa7.77□□□□□ -1.17
PIF1YML061C LEO1P38439 464 aa7.76□□□□□ -1.17
PIF1YML061C DMA1P38823 416 aa7.75□□□□□ -1.17
PIF1YML061C TY1B-HO13535 1793 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-DR5P0C2I2 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-DR6P0C2I3 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-LR2P0C2I5 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-LR3P0C2I6 1755 aaKnown RBP7.74□□□□□ -1.17
PIF1YML061C TY1B-PR1P0C2I9 1755 aaKnown RBP7.74□□□□□ -1.17
PIF1YML061C TY1B-PR2P0C2J0 1756 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-PR3P0C2J1 1755 aaKnown RBP7.74□□□□□ -1.17
PIF1YML061C TY1B-JR1P47098 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-ML2Q03434 1755 aaKnown RBP7.74□□□□□ -1.17
PIF1YML061C TY1B-ER1Q03612 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-ML1Q04711 1755 aaKnown RBP7.74□□□□□ -1.17
PIF1YML061C TY1B-GR2Q12269 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-OLQ12273 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-PLQ12414 1755 aaKnown RBP7.74□□□□□ -1.17
PIF1YML061C TY1B-BRQ12193 1756 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-GR3Q12316 1755 aa7.74□□□□□ -1.17
PIF1YML061C TY1B-ORQ92393 1755 aa7.74□□□□□ -1.17
PIF1YML061C IOC4Q04213 475 aa7.74□□□□□ -1.17
PIF1YML061C TSC11P40061 1430 aa7.74□□□□□ -1.17
PIF1YML061C RTT106P40161 455 aa7.72□□□□□ -1.17
PIF1YML061C ULS1Q08562 1619 aa7.72□□□□□ -1.17
PIF1YML061C VTH1P40438 1549 aa7.71□□□□□ -1.17
PIF1YML061C VTH2P40890 1549 aa7.71□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms