RNA–Protein interactions for RNA: YLR325C

RPL38, Transcript of Ribosomal 60S subunit protein L38, yeastyeast

Gene RPL38, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL38YLR325C MTC1P47018 478 aaKnown RBP8.19□□□□□ -1.1
RPL38YLR325C DRS1P32892 752 aaKnown RBP7.91□□□□□ -1.14
RPL38YLR325C FAP1P53971 965 aa7.31□□□□□ -1.24
RPL38YLR325C DIP2Q12220 943 aaPredicted RBP6.86□□□□□ -1.31
RPL38YLR325C PRY3P47033 881 aa6.83□□□□□ -1.32
RPL38YLR325C PRI1P10363 409 aa6.81□□□□□ -1.32
RPL38YLR325C ISW2Q08773 1120 aa6.78□□□□□ -1.32
RPL38YLR325C AAD16Q02895 342 aa6.77□□□□□ -1.33
RPL38YLR325C RPG1P38249 964 aaKnown RBP6.75□□□□□ -1.33
RPL38YLR325C BFR2Q06631 534 aaKnown RBP6.66□□□□□ -1.34
RPL38YLR325C AVT3P36062 692 aa6.6□□□□□ -1.35
RPL38YLR325C RSE1Q04693 1361 aaKnown RBP6.56□□□□□ -1.36
RPL38YLR325C TSR3Q12094 313 aaKnown RBP6.53□□□□□ -1.36
RPL38YLR325C RPL17AP05740 184 aaKnown RBP6.36□□□□□ -1.39
RPL38YLR325C YCK3P39962 524 aa6.36□□□□□ -1.39
RPL38YLR325C RPL17BP46990 184 aaKnown RBP6.36□□□□□ -1.39
RPL38YLR325C HAA1Q12753 694 aaKnown RBP6.35□□□□□ -1.39
RPL38YLR325C REB1P21538 810 aa6.34□□□□□ -1.39
RPL38YLR325C MRPL32P25348 183 aa6.24□□□□□ -1.41
RPL38YLR325C SPT21P35209 758 aa6.01□□□□□ -1.45
RPL38YLR325C YKR023WP36119 530 aaKnown RBP5.96□□□□□ -1.46
RPL38YLR325C CDC27P38042 758 aa5.94□□□□□ -1.46
RPL38YLR325C YGL015CP33199 130 aa5.92□□□□□ -1.46
RPL38YLR325C HOP09932 586 aa5.91□□□□□ -1.46
RPL38YLR325C TFA1P36100 482 aa5.91□□□□□ -1.46
RPL38YLR325C DCD1P06773 312 aa5.89□□□□□ -1.47
RPL38YLR325C RIM101P33400 625 aa5.87□□□□□ -1.47
RPL38YLR325C TFC8Q12308 588 aa5.83□□□□□ -1.48
RPL38YLR325C MAP2P38174 421 aaKnown RBP5.75□□□□□ -1.49
RPL38YLR325C OXP1P28273 1286 aa5.7□□□□□ -1.5
RPL38YLR325C YIL055CP40523 627 aaKnown RBP5.69□□□□□ -1.5
RPL38YLR325C PTP3P40048 928 aa5.68□□□□□ -1.5
RPL38YLR325C SCY1P53009 804 aa5.68□□□□□ -1.5
RPL38YLR325C BCH2P36122 765 aa5.67□□□□□ -1.5
RPL38YLR325C UBP10P53874 792 aaPredicted RBP5.67□□□□□ -1.5
RPL38YLR325C YAH1Q12184 172 aaKnown RBP5.66□□□□□ -1.5
RPL38YLR325C SLX5P32828 619 aaKnown RBP5.56□□□□□ -1.52
RPL38YLR325C RSM7P47150 247 aa5.55□□□□□ -1.52
RPL38YLR325C EPS1P40557 701 aa5.53□□□□□ -1.52
RPL38YLR325C BDF1P35817 686 aa5.51□□□□□ -1.53
RPL38YLR325C TIF4632P39936 914 aaKnown RBP5.51□□□□□ -1.53
RPL38YLR325C AI2P03876 854 aa5.49□□□□□ -1.53
RPL38YLR325C YLR271WQ06152 274 aa5.49□□□□□ -1.53
RPL38YLR325C BBC1P47068 1157 aa5.48□□□□□ -1.53
RPL38YLR325C SSP1P38871 571 aa5.46□□□□□ -1.54
RPL38YLR325C TGL3P40308 642 aa5.45□□□□□ -1.54
RPL38YLR325C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
RPL38YLR325C PSD2P53037 1138 aaKnown RBP5.34□□□□□ -1.55
RPL38YLR325C MRM1P25270 412 aa5.32□□□□□ -1.56
RPL38YLR325C CST9Q06032 482 aa5.32□□□□□ -1.56
RPL38YLR325C BUD31P25337 157 aaPredicted RBP5.29□□□□□ -1.56
RPL38YLR325C MGA2P40578 1113 aa5.29□□□□□ -1.56
RPL38YLR325C UBP9P39967 754 aa5.26□□□□□ -1.57
RPL38YLR325C YOR238WQ08634 303 aa5.26□□□□□ -1.57
RPL38YLR325C PIB1Q06651 286 aa5.25□□□□□ -1.57
RPL38YLR325C YAP5P40574 245 aa5.24□□□□□ -1.57
RPL38YLR325C RTG3P38165 486 aa5.2□□□□□ -1.58
RPL38YLR325C MST1P07236 462 aa5.19□□□□□ -1.58
RPL38YLR325C RCR1P38212 213 aa5.18□□□□□ -1.58
RPL38YLR325C WSC3Q12215 556 aa5.18□□□□□ -1.58
RPL38YLR325C YBL029C-AQ3E756 94 aa5.18□□□□□ -1.58
RPL38YLR325C YFR006WP43590 535 aa5.17□□□□□ -1.58
RPL38YLR325C NSR1P27476 414 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
RPL38YLR325C GTT3P39996 337 aa5.16□□□□□ -1.58
RPL38YLR325C VPS29P38759 282 aa5.15□□□□□ -1.59
RPL38YLR325C DBP1P24784 617 aaKnown RBP5.14□□□□□ -1.59
RPL38YLR325C SIS1P25294 352 aaKnown RBP5.14□□□□□ -1.59
RPL38YLR325C YMR1P47147 688 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
RPL38YLR325C VNX1P42839 908 aa5.1□□□□□ -1.59
RPL38YLR325C SPP1Q03012 353 aa5.1□□□□□ -1.59
RPL38YLR325C STS1P38637 319 aa5.09□□□□□ -1.59
RPL38YLR325C SET4P42948 560 aa5.04□□□□□ -1.6
RPL38YLR325C VMA1P17255 1071 aaKnown RBP5.03□□□□□ -1.6
RPL38YLR325C RAM2P29703 316 aa5.03□□□□□ -1.6
RPL38YLR325C MIF2P35201 549 aa5.02□□□□□ -1.61
RPL38YLR325C TIF11P38912 153 aaKnown RBP5.02□□□□□ -1.61
RPL38YLR325C ULI1P43604 169 aa5.01□□□□□ -1.61
RPL38YLR325C YOL036WQ08206 761 aa4.99□□□□□ -1.61
RPL38YLR325C MAK11P20484 414 aaKnown RBP4.97□□□□□ -1.61
RPL38YLR325C LDB19Q12502 818 aa4.97□□□□□ -1.61
RPL38YLR325C GYP5Q12344 894 aa4.96□□□□□ -1.62
RPL38YLR325C TRP5P00931 707 aaKnown RBP4.95□□□□□ -1.62
RPL38YLR325C DCW1P36091 449 aa4.95□□□□□ -1.62
RPL38YLR325C COQ8P27697 501 aa4.94□□□□□ -1.62
RPL38YLR325C EAP1P36041 632 aaKnown RBP4.94□□□□□ -1.62
RPL38YLR325C SAM3Q08986 587 aa4.94□□□□□ -1.62
RPL38YLR325C IOC2Q12072 812 aa4.94□□□□□ -1.62
RPL38YLR325C MSB4Q12317 492 aa4.94□□□□□ -1.62
RPL38YLR325C EDS1P38073 919 aa4.92□□□□□ -1.62
RPL38YLR325C PTC3P34221 468 aaKnown RBP4.91□□□□□ -1.62
RPL38YLR325C GRE2Q12068 342 aaKnown RBP4.91□□□□□ -1.62
RPL38YLR325C YJL171CP46992 396 aa4.9□□□□□ -1.63
RPL38YLR325C ATH1P48016 1211 aa4.9□□□□□ -1.63
RPL38YLR325C HTA1P04911 132 aaKnown RBP4.89□□□□□ -1.63
RPL38YLR325C HTA2P04912 132 aa4.89□□□□□ -1.63
RPL38YLR325C RTG1P32607 177 aa4.89□□□□□ -1.63
RPL38YLR325C AIR2Q12476 344 aaKnown RBP4.88□□□□□ -1.63
RPL38YLR325C NCR1Q12200 1170 aa4.87□□□□□ -1.63
RPL38YLR325C SET1P38827 1080 aaKnown RBP4.86□□□□□ -1.63
RPL38YLR325C YEL023CP39992 682 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms