RNA–Protein interactions for RNA: YLR306W

UBC12, Transcript of Enzyme that mediates the conjugation of Rub1p, yeastyeast

Gene UBC12, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC12YLR306W MTC1P47018 478 aaKnown RBP19.78■□□□□ 0.76
UBC12YLR306W DRS1P32892 752 aaKnown RBP18.65■□□□□ 0.58
UBC12YLR306W FAP1P53971 965 aa17.42■□□□□ 0.38
UBC12YLR306W PRI1P10363 409 aa16.53■□□□□ 0.24
UBC12YLR306W AAD16Q02895 342 aa16.39■□□□□ 0.21
UBC12YLR306W PRY3P47033 881 aa16.36■□□□□ 0.21
UBC12YLR306W ISW2Q08773 1120 aa16.32■□□□□ 0.2
UBC12YLR306W DIP2Q12220 943 aaPredicted RBP16.28■□□□□ 0.2
UBC12YLR306W RPG1P38249 964 aaKnown RBP16.11■□□□□ 0.17
UBC12YLR306W AVT3P36062 692 aa15.81■□□□□ 0.12
UBC12YLR306W RSE1Q04693 1361 aaKnown RBP15.69■□□□□ 0.1
UBC12YLR306W BFR2Q06631 534 aaKnown RBP15.62■□□□□ 0.09
UBC12YLR306W TSR3Q12094 313 aaKnown RBP15.58■□□□□ 0.08
UBC12YLR306W YCK3P39962 524 aa15.53■□□□□ 0.08
UBC12YLR306W HAA1Q12753 694 aaKnown RBP15.45■□□□□ 0.06
UBC12YLR306W RPL17AP05740 184 aaKnown RBP15.15■□□□□ 0.02
UBC12YLR306W RPL17BP46990 184 aaKnown RBP15.15■□□□□ 0.02
UBC12YLR306W REB1P21538 810 aa15.05■□□□□ -0
UBC12YLR306W MRPL32P25348 183 aa15□□□□□ -0.01
UBC12YLR306W SPT21P35209 758 aa14.58□□□□□ -0.08
UBC12YLR306W YGL015CP33199 130 aa14.34□□□□□ -0.11
UBC12YLR306W YKR023WP36119 530 aaKnown RBP14.34□□□□□ -0.11
UBC12YLR306W CDC27P38042 758 aa14.3□□□□□ -0.12
UBC12YLR306W RIM101P33400 625 aa14.14□□□□□ -0.15
UBC12YLR306W TFC8Q12308 588 aa14.05□□□□□ -0.16
UBC12YLR306W TFA1P36100 482 aa13.99□□□□□ -0.17
UBC12YLR306W HOP09932 586 aa13.98□□□□□ -0.17
UBC12YLR306W UBP10P53874 792 aaPredicted RBP13.94□□□□□ -0.18
UBC12YLR306W DCD1P06773 312 aa13.89□□□□□ -0.19
UBC12YLR306W MAP2P38174 421 aaKnown RBP13.81□□□□□ -0.2
UBC12YLR306W OXP1P28273 1286 aa13.63□□□□□ -0.23
UBC12YLR306W BCH2P36122 765 aa13.58□□□□□ -0.24
UBC12YLR306W SCY1P53009 804 aa13.57□□□□□ -0.24
UBC12YLR306W SLX5P32828 619 aaKnown RBP13.42□□□□□ -0.26
UBC12YLR306W YIL055CP40523 627 aaKnown RBP13.39□□□□□ -0.27
UBC12YLR306W PTP3P40048 928 aa13.35□□□□□ -0.27
UBC12YLR306W TIF4632P39936 914 aaKnown RBP13.32□□□□□ -0.28
UBC12YLR306W TGL3P40308 642 aa13.28□□□□□ -0.28
UBC12YLR306W EPS1P40557 701 aa13.26□□□□□ -0.29
UBC12YLR306W RSM7P47150 247 aa13.24□□□□□ -0.29
UBC12YLR306W BDF1P35817 686 aa13.2□□□□□ -0.3
UBC12YLR306W YAH1Q12184 172 aaKnown RBP13.18□□□□□ -0.3
UBC12YLR306W AI2P03876 854 aa13.08□□□□□ -0.32
UBC12YLR306W BBC1P47068 1157 aa13.08□□□□□ -0.32
UBC12YLR306W BUD31P25337 157 aaPredicted RBP13.05□□□□□ -0.32
UBC12YLR306W YLR271WQ06152 274 aa13.05□□□□□ -0.32
UBC12YLR306W SSP1P38871 571 aa12.96□□□□□ -0.33
UBC12YLR306W PSD2P53037 1138 aaKnown RBP12.86□□□□□ -0.35
UBC12YLR306W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.86□□□□□ -0.35not detected
UBC12YLR306W NSR1P27476 414 aaKnown RBP RIP-Chip data12.85□□□□□ -0.35not detected
UBC12YLR306W MST1P07236 462 aa12.79□□□□□ -0.36
UBC12YLR306W UBP9P39967 754 aa12.78□□□□□ -0.36
UBC12YLR306W YOR238WQ08634 303 aa12.71□□□□□ -0.37
UBC12YLR306W YAP5P40574 245 aa12.67□□□□□ -0.38
UBC12YLR306W MGA2P40578 1113 aa12.64□□□□□ -0.39
UBC12YLR306W MRM1P25270 412 aa12.6□□□□□ -0.39
UBC12YLR306W CST9Q06032 482 aa12.58□□□□□ -0.4
UBC12YLR306W YBL029C-AQ3E756 94 aa12.44□□□□□ -0.42
UBC12YLR306W SIS1P25294 352 aaKnown RBP12.39□□□□□ -0.43
UBC12YLR306W RTG3P38165 486 aa12.39□□□□□ -0.43
UBC12YLR306W VPS29P38759 282 aa12.37□□□□□ -0.43
UBC12YLR306W VNX1P42839 908 aa12.37□□□□□ -0.43
UBC12YLR306W GTT3P39996 337 aa12.35□□□□□ -0.43
UBC12YLR306W YMR1P47147 688 aaKnown RBP RIP-Chip data12.34□□□□□ -0.43not detected
UBC12YLR306W PIB1Q06651 286 aa12.3□□□□□ -0.44
UBC12YLR306W WSC3Q12215 556 aa12.27□□□□□ -0.45
UBC12YLR306W DBP1P24784 617 aaKnown RBP12.25□□□□□ -0.45
UBC12YLR306W RCR1P38212 213 aa12.25□□□□□ -0.45
UBC12YLR306W SPP1Q03012 353 aa12.24□□□□□ -0.45
UBC12YLR306W STS1P38637 319 aa12.21□□□□□ -0.45
UBC12YLR306W TIF11P38912 153 aaKnown RBP12.19□□□□□ -0.46
UBC12YLR306W YFR006WP43590 535 aa12.16□□□□□ -0.46
UBC12YLR306W MSB4Q12317 492 aa12.14□□□□□ -0.47
UBC12YLR306W VMA1P17255 1071 aaKnown RBP12.12□□□□□ -0.47
UBC12YLR306W SAM3Q08986 587 aa12.09□□□□□ -0.47
UBC12YLR306W YOL036WQ08206 761 aa12.08□□□□□ -0.48
UBC12YLR306W EAP1P36041 632 aaKnown RBP12.04□□□□□ -0.48
UBC12YLR306W ULI1P43604 169 aa12.04□□□□□ -0.48
UBC12YLR306W IOC2Q12072 812 aa12.04□□□□□ -0.48
UBC12YLR306W SET4P42948 560 aa12.01□□□□□ -0.49
UBC12YLR306W RAM2P29703 316 aa12□□□□□ -0.49
UBC12YLR306W FKH1P40466 484 aa11.99□□□□□ -0.49
UBC12YLR306W LDB19Q12502 818 aa11.97□□□□□ -0.49
UBC12YLR306W MAK11P20484 414 aaKnown RBP11.96□□□□□ -0.49
UBC12YLR306W AIR2Q12476 344 aaKnown RBP11.95□□□□□ -0.5
UBC12YLR306W TRP5P00931 707 aaKnown RBP11.92□□□□□ -0.5
UBC12YLR306W ABP1P15891 592 aaKnown RBP11.9□□□□□ -0.5
UBC12YLR306W GYP5Q12344 894 aa11.87□□□□□ -0.51
UBC12YLR306W YNL035CP53962 389 aaKnown RBP11.81□□□□□ -0.52
UBC12YLR306W RTG1P32607 177 aa11.8□□□□□ -0.52
UBC12YLR306W EDS1P38073 919 aa11.79□□□□□ -0.52
UBC12YLR306W MIF2P35201 549 aa11.78□□□□□ -0.52
UBC12YLR306W HTA1P04911 132 aaKnown RBP11.77□□□□□ -0.53
UBC12YLR306W HTA2P04912 132 aa11.77□□□□□ -0.53
UBC12YLR306W YJL171CP46992 396 aa11.77□□□□□ -0.53
UBC12YLR306W COQ8P27697 501 aa11.76□□□□□ -0.53
UBC12YLR306W SEC61P32915 480 aa11.76□□□□□ -0.53
UBC12YLR306W JIP4Q03361 876 aa11.75□□□□□ -0.53
UBC12YLR306W PTC3P34221 468 aaKnown RBP11.74□□□□□ -0.53
UBC12YLR306W DCW1P36091 449 aa11.74□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms