RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeastyeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSH1YLR277C MTC1P47018 478 aaKnown RBP8.51□□□□□ -1.05
YSH1YLR277C DRS1P32892 752 aaKnown RBP8.03□□□□□ -1.12
YSH1YLR277C FAP1P53971 965 aa7.62□□□□□ -1.19
YSH1YLR277C PRY3P47033 881 aa7.15□□□□□ -1.26
YSH1YLR277C PRI1P10363 409 aa7.12□□□□□ -1.27
YSH1YLR277C RQC2Q12532 1038 aaKnown RBP7.11□□□□□ -1.27
YSH1YLR277C AAD16Q02895 342 aa7.09□□□□□ -1.27
YSH1YLR277C ISW2Q08773 1120 aa7.06□□□□□ -1.28
YSH1YLR277C DIP2Q12220 943 aaPredicted RBP7□□□□□ -1.29
YSH1YLR277C RPG1P38249 964 aaKnown RBP6.97□□□□□ -1.29
YSH1YLR277C BFR2Q06631 534 aaKnown RBP6.8□□□□□ -1.32
YSH1YLR277C AVT3P36062 692 aa6.78□□□□□ -1.32
YSH1YLR277C RSE1Q04693 1361 aaKnown RBP6.77□□□□□ -1.33
YSH1YLR277C TSR3Q12094 313 aaKnown RBP6.75□□□□□ -1.33
YSH1YLR277C HAA1Q12753 694 aaKnown RBP6.7□□□□□ -1.34
YSH1YLR277C YCK3P39962 524 aa6.67□□□□□ -1.34
YSH1YLR277C TFA1P36100 482 aa6.64□□□□□ -1.35
YSH1YLR277C RPL17AP05740 184 aaKnown RBP6.55□□□□□ -1.36
YSH1YLR277C RPL17BP46990 184 aaKnown RBP6.55□□□□□ -1.36
YSH1YLR277C REB1P21538 810 aa6.53□□□□□ -1.36
YSH1YLR277C MRPL32P25348 183 aa6.51□□□□□ -1.37
YSH1YLR277C TAF7Q05021 590 aa6.45□□□□□ -1.38
YSH1YLR277C URN1Q06525 465 aaKnown RBP6.26□□□□□ -1.41
YSH1YLR277C SPT21P35209 758 aa6.23□□□□□ -1.41
YSH1YLR277C YGL015CP33199 130 aa6.2□□□□□ -1.42
YSH1YLR277C CDC27P38042 758 aa6.16□□□□□ -1.42
YSH1YLR277C YKR023WP36119 530 aaKnown RBP6.14□□□□□ -1.43
YSH1YLR277C HOP09932 586 aa6.05□□□□□ -1.44
YSH1YLR277C RIM101P33400 625 aa6.03□□□□□ -1.44
YSH1YLR277C TFC8Q12308 588 aa6.03□□□□□ -1.44
YSH1YLR277C DCD1P06773 312 aa6.01□□□□□ -1.45
YSH1YLR277C UBP10P53874 792 aaPredicted RBP5.99□□□□□ -1.45
YSH1YLR277C MAP2P38174 421 aaKnown RBP5.97□□□□□ -1.45
YSH1YLR277C SIS2P36024 562 aa5.96□□□□□ -1.46
YSH1YLR277C EBP2P36049 427 aaKnown RBP5.92□□□□□ -1.46
YSH1YLR277C SCY1P53009 804 aa5.88□□□□□ -1.47
YSH1YLR277C CAB3P36076 571 aa5.87□□□□□ -1.47
YSH1YLR277C YFR016CP43597 1233 aaKnown RBP5.85□□□□□ -1.47
YSH1YLR277C BCH2P36122 765 aa5.83□□□□□ -1.48
YSH1YLR277C OXP1P28273 1286 aa5.82□□□□□ -1.48
YSH1YLR277C SLX5P32828 619 aaKnown RBP5.8□□□□□ -1.48
YSH1YLR277C YIL055CP40523 627 aaKnown RBP5.8□□□□□ -1.48
YSH1YLR277C PTP3P40048 928 aa5.79□□□□□ -1.48
YSH1YLR277C NOP2P40991 618 aaKnown RBP5.77□□□□□ -1.49
YSH1YLR277C TIF4632P39936 914 aaKnown RBP5.76□□□□□ -1.49
YSH1YLR277C IOC4Q04213 475 aa5.73□□□□□ -1.49
YSH1YLR277C NAP1P25293 417 aaKnown RBP5.72□□□□□ -1.49
YSH1YLR277C YAH1Q12184 172 aaKnown RBP5.72□□□□□ -1.49
YSH1YLR277C EPS1P40557 701 aa5.71□□□□□ -1.49
YSH1YLR277C YRB30P53107 440 aaPredicted RBP5.71□□□□□ -1.5
YSH1YLR277C TGL3P40308 642 aa5.7□□□□□ -1.5
YSH1YLR277C KRI1P42846 591 aaKnown RBP5.69□□□□□ -1.5
YSH1YLR277C RSM7P47150 247 aa5.68□□□□□ -1.5
YSH1YLR277C RPS0BP46654 252 aaKnown RBP5.68□□□□□ -1.5
YSH1YLR277C BDF1P35817 686 aa5.67□□□□□ -1.5
YSH1YLR277C BBC1P47068 1157 aa5.65□□□□□ -1.51
YSH1YLR277C BUD31P25337 157 aaPredicted RBP5.64□□□□□ -1.51
YSH1YLR277C AI2P03876 854 aa5.63□□□□□ -1.51
YSH1YLR277C LEO1P38439 464 aa5.59□□□□□ -1.51
YSH1YLR277C YLR271WQ06152 274 aa5.59□□□□□ -1.51
YSH1YLR277C DMA1P38823 416 aa5.57□□□□□ -1.52
YSH1YLR277C SSP1P38871 571 aa5.57□□□□□ -1.52
YSH1YLR277C CWC22P53333 577 aaKnown RBP5.57□□□□□ -1.52
YSH1YLR277C UBP9P39967 754 aa5.54□□□□□ -1.52
YSH1YLR277C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
YSH1YLR277C YPR148CQ06523 435 aa5.52□□□□□ -1.53
YSH1YLR277C IFH1P39520 1085 aa5.49□□□□□ -1.53
YSH1YLR277C PSD2P53037 1138 aaKnown RBP5.49□□□□□ -1.53
YSH1YLR277C YOR238WQ08634 303 aa5.48□□□□□ -1.53
YSH1YLR277C NSR1P27476 414 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
YSH1YLR277C YAP5P40574 245 aa5.46□□□□□ -1.54
YSH1YLR277C MST1P07236 462 aa5.45□□□□□ -1.54
YSH1YLR277C MNN4P36044 1178 aa5.45□□□□□ -1.54
YSH1YLR277C SNU71P53207 620 aaKnown RBP5.45□□□□□ -1.54
YSH1YLR277C ORC1P54784 914 aaPredicted RBP5.45□□□□□ -1.54
YSH1YLR277C PSH1Q12161 406 aa5.45□□□□□ -1.54
YSH1YLR277C AIM44Q99299 758 aa5.45□□□□□ -1.54
YSH1YLR277C MRM1P25270 412 aa5.43□□□□□ -1.54
YSH1YLR277C CST9Q06032 482 aa5.43□□□□□ -1.54
YSH1YLR277C SIS1P25294 352 aaKnown RBP5.42□□□□□ -1.54
YSH1YLR277C DEF1P35732 738 aaKnown RBP5.42□□□□□ -1.54
YSH1YLR277C RLP24Q07915 199 aaKnown RBP5.42□□□□□ -1.54
YSH1YLR277C TOP1P04786 769 aa5.41□□□□□ -1.54
YSH1YLR277C MGA2P40578 1113 aa5.4□□□□□ -1.54
YSH1YLR277C YBL029C-AQ3E756 94 aa5.39□□□□□ -1.55
YSH1YLR277C ENV11P53246 860 aa5.38□□□□□ -1.55
YSH1YLR277C GTT3P39996 337 aa5.37□□□□□ -1.55
YSH1YLR277C MDG1P53885 366 aa5.36□□□□□ -1.55
YSH1YLR277C WSC3Q12215 556 aa5.35□□□□□ -1.55
YSH1YLR277C PIB1Q06651 286 aa5.35□□□□□ -1.55
YSH1YLR277C VNX1P42839 908 aa5.32□□□□□ -1.56
YSH1YLR277C RTG3P38165 486 aa5.31□□□□□ -1.56
YSH1YLR277C SPP1Q03012 353 aa5.3□□□□□ -1.56
YSH1YLR277C NUG1P40010 520 aaKnown RBP5.29□□□□□ -1.56
YSH1YLR277C YMR1P47147 688 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
YSH1YLR277C RCR1P38212 213 aa5.28□□□□□ -1.56
YSH1YLR277C VPS29P38759 282 aa5.28□□□□□ -1.56
YSH1YLR277C DBP1P24784 617 aaKnown RBP5.26□□□□□ -1.57
YSH1YLR277C SPT2P06843 333 aaPredicted RBP5.26□□□□□ -1.57
YSH1YLR277C YFR006WP43590 535 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms