RNA–Protein interactions for RNA: YLR234W

TOP3, Transcript of DNA Topoisomerase III, yeastyeast

Gene TOP3, Length 1,971 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP3YLR234W SGS1P35187 1447 aa12.92□□□□□ -0.34
TOP3YLR234W INO80P53115 1489 aa12.72□□□□□ -0.37
TOP3YLR234W TCB3Q03640 1545 aaKnown RBP12.6□□□□□ -0.39
TOP3YLR234W MON2P48563 1636 aaPredicted RBP12.54□□□□□ -0.4
TOP3YLR234W TY1B-DR4Q07793 1604 aa12.5□□□□□ -0.41
TOP3YLR234W SPA2P23201 1466 aaKnown RBP12.3□□□□□ -0.44
TOP3YLR234W SSN2P38931 1420 aa12.29□□□□□ -0.44
TOP3YLR234W SWR1Q05471 1514 aa12.25□□□□□ -0.45
TOP3YLR234W HSL1P34244 1518 aa12.23□□□□□ -0.45
TOP3YLR234W SPT6P23615 1451 aaKnown RBP12.18□□□□□ -0.46
TOP3YLR234W HIR3P47171 1648 aa11.99□□□□□ -0.49
TOP3YLR234W DNA2P38859 1522 aa11.92□□□□□ -0.5
TOP3YLR234W XRN1P22147 1528 aaKnown RBP11.88□□□□□ -0.51
TOP3YLR234W KOG1P38873 1557 aa11.87□□□□□ -0.51
TOP3YLR234W DRS1P32892 752 aaKnown RBP11.86□□□□□ -0.51
TOP3YLR234W REV3P14284 1504 aa11.72□□□□□ -0.53
TOP3YLR234W SIN3P22579 1536 aa11.65□□□□□ -0.54
TOP3YLR234W THO2P53552 1597 aaKnown RBP11.63□□□□□ -0.55
TOP3YLR234W BUD4P47136 1447 aa11.6□□□□□ -0.55
TOP3YLR234W SSK2P53599 1579 aa11.58□□□□□ -0.56
TOP3YLR234W ECM5Q03214 1411 aa11.56□□□□□ -0.56
TOP3YLR234W TAF2P23255 1407 aa11.54□□□□□ -0.56
TOP3YLR234W ATG2P53855 1592 aa11.5□□□□□ -0.57
TOP3YLR234W ESP1Q03018 1630 aa11.48□□□□□ -0.57
TOP3YLR234W MDS3P53094 1487 aa11.42□□□□□ -0.58
TOP3YLR234W PEP1P32319 1579 aa11.42□□□□□ -0.58
TOP3YLR234W MYO2P19524 1574 aaKnown RBP11.41□□□□□ -0.58
TOP3YLR234W BFR2Q06631 534 aaKnown RBP11.37□□□□□ -0.59
TOP3YLR234W SKI3P17883 1432 aaKnown RBP11.37□□□□□ -0.59
TOP3YLR234W YPK9Q12697 1472 aa11.31□□□□□ -0.6
TOP3YLR234W SCC2Q04002 1493 aa11.22□□□□□ -0.61
TOP3YLR234W POL1P13382 1468 aa11.21□□□□□ -0.62
TOP3YLR234W RPO31P04051 1460 aa11.15□□□□□ -0.62
TOP3YLR234W STU1P38198 1513 aa11.14□□□□□ -0.63
TOP3YLR234W UFD4P33202 1483 aa11.12□□□□□ -0.63
TOP3YLR234W RKR1Q04781 1562 aa11.11□□□□□ -0.63
TOP3YLR234W YCF1P39109 1515 aaKnown RBP11.07□□□□□ -0.64
TOP3YLR234W TY2B-LR1P0C2J3 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-FP0CX63 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-GR2P0CX64 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-CP25384 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-DR2Q03494 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY1B-DR1Q03855 1755 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-DR3Q07791 1770 aaKnown RBP11.06□□□□□ -0.64
TOP3YLR234W TY2B-OR1Q12113 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-DR1Q12472 1770 aa11.06□□□□□ -0.64
TOP3YLR234W TY2B-OR2Q12501 1770 aa11.06□□□□□ -0.64
TOP3YLR234W BPT1P14772 1559 aa11.06□□□□□ -0.64
TOP3YLR234W TOP2P06786 1428 aaKnown RBP11.05□□□□□ -0.64
TOP3YLR234W YOR1P53049 1477 aa11.05□□□□□ -0.64
TOP3YLR234W NOP2P40991 618 aaKnown RBP11.05□□□□□ -0.64
TOP3YLR234W RSE1Q04693 1361 aaKnown RBP11.02□□□□□ -0.65
TOP3YLR234W CHD1P32657 1468 aa11.02□□□□□ -0.65
TOP3YLR234W YTA7P40340 1379 aa11□□□□□ -0.65
TOP3YLR234W TY1B-DR3Q99231 1755 aa10.99□□□□□ -0.65
TOP3YLR234W SMC4Q12267 1418 aa10.98□□□□□ -0.65
TOP3YLR234W RQC2Q12532 1038 aaKnown RBP10.97□□□□□ -0.65
TOP3YLR234W MMS22Q06164 1454 aa10.97□□□□□ -0.65
TOP3YLR234W TY2B-BQ12491 1770 aa10.95□□□□□ -0.66
TOP3YLR234W MYO4P32492 1471 aa10.94□□□□□ -0.66
TOP3YLR234W TY1B-BRQ12193 1756 aa10.91□□□□□ -0.66
TOP3YLR234W TY1B-GR3Q12316 1755 aa10.91□□□□□ -0.66
TOP3YLR234W TY1B-ORQ92393 1755 aa10.91□□□□□ -0.66
TOP3YLR234W TY1B-HO13535 1793 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-DR5P0C2I2 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-DR6P0C2I3 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-LR2P0C2I5 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-LR3P0C2I6 1755 aaKnown RBP10.89□□□□□ -0.67
TOP3YLR234W TY1B-PR1P0C2I9 1755 aaKnown RBP10.89□□□□□ -0.67
TOP3YLR234W TY1B-PR2P0C2J0 1756 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-PR3P0C2J1 1755 aaKnown RBP10.89□□□□□ -0.67
TOP3YLR234W TY1B-JR1P47098 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-ML2Q03434 1755 aaKnown RBP10.89□□□□□ -0.67
TOP3YLR234W TY1B-ER1Q03612 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-ML1Q04711 1755 aaKnown RBP10.89□□□□□ -0.67
TOP3YLR234W TY1B-GR2Q12269 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-OLQ12273 1755 aa10.89□□□□□ -0.67
TOP3YLR234W TY1B-PLQ12414 1755 aaKnown RBP10.89□□□□□ -0.67
TOP3YLR234W MTC1P47018 478 aaKnown RBP10.88□□□□□ -0.67
TOP3YLR234W CDC25P04821 1589 aa10.86□□□□□ -0.67
TOP3YLR234W SPP41P38904 1435 aa10.81□□□□□ -0.68
TOP3YLR234W SAS10Q12136 610 aaPredicted RBP10.79□□□□□ -0.68
TOP3YLR234W PAN1P32521 1480 aa10.79□□□□□ -0.68
TOP3YLR234W SNQ2P32568 1501 aaKnown RBP10.77□□□□□ -0.68
TOP3YLR234W ESC1Q03661 1658 aaKnown RBP10.75□□□□□ -0.69
TOP3YLR234W VTH1P40438 1549 aa10.74□□□□□ -0.69
TOP3YLR234W VTH2P40890 1549 aa10.74□□□□□ -0.69
TOP3YLR234W TSC11P40061 1430 aa10.73□□□□□ -0.69
TOP3YLR234W MLP2P40457 1679 aa10.72□□□□□ -0.69
TOP3YLR234W STH1P32597 1359 aa10.72□□□□□ -0.69
TOP3YLR234W NSR1P27476 414 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69not detected
TOP3YLR234W DNF1P32660 1571 aa10.71□□□□□ -0.7
TOP3YLR234W TY1B-JR2P47100 1755 aaKnown RBP10.7□□□□□ -0.7
TOP3YLR234W TY1B-ER2Q03619 1755 aa10.7□□□□□ -0.7
TOP3YLR234W TY1B-MR1Q04214 1755 aa10.7□□□□□ -0.7
TOP3YLR234W TY1B-MR2Q04670 1755 aaKnown RBP10.7□□□□□ -0.7
TOP3YLR234W TY1B-LR1Q12088 1755 aaKnown RBP10.7□□□□□ -0.7
TOP3YLR234W TY1B-NL1Q12112 1755 aa10.7□□□□□ -0.7
TOP3YLR234W TY1B-GR1Q12141 1755 aa10.7□□□□□ -0.7
TOP3YLR234W TY1B-BLQ12490 1755 aa10.7□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms