RNA–Protein interactions for RNA: YLR212C

TUB4, Transcript of Gamma-tubulin, yeastyeast

Gene TUB4, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUB4YLR212C INO80P53115 1489 aa17.73■□□□□ 0.43
TUB4YLR212C MON2P48563 1636 aaPredicted RBP17.73■□□□□ 0.43
TUB4YLR212C TCB3Q03640 1545 aaKnown RBP16.96■□□□□ 0.31
TUB4YLR212C SWR1Q05471 1514 aa16.96■□□□□ 0.31
TUB4YLR212C DNA2P38859 1522 aa16.91■□□□□ 0.3
TUB4YLR212C TY1B-DR4Q07793 1604 aa16.86■□□□□ 0.29
TUB4YLR212C SGS1P35187 1447 aa16.86■□□□□ 0.29
TUB4YLR212C KOG1P38873 1557 aa16.65■□□□□ 0.26
TUB4YLR212C HSL1P34244 1518 aa16.34■□□□□ 0.21
TUB4YLR212C SPT6P23615 1451 aaKnown RBP16.33■□□□□ 0.2
TUB4YLR212C RSE1Q04693 1361 aaKnown RBP16.19■□□□□ 0.18
TUB4YLR212C SPA2P23201 1466 aaKnown RBP16.17■□□□□ 0.18
TUB4YLR212C HIR3P47171 1648 aa15.99■□□□□ 0.15
TUB4YLR212C ECM5Q03214 1411 aa15.93■□□□□ 0.14
TUB4YLR212C BUD4P47136 1447 aa15.81■□□□□ 0.12
TUB4YLR212C THO2P53552 1597 aaKnown RBP15.78■□□□□ 0.12
TUB4YLR212C XRN1P22147 1528 aaKnown RBP15.74■□□□□ 0.11
TUB4YLR212C MDS3P53094 1487 aa15.63■□□□□ 0.09
TUB4YLR212C SSN2P38931 1420 aa15.59■□□□□ 0.09
TUB4YLR212C PEP1P32319 1579 aa15.49■□□□□ 0.07
TUB4YLR212C MTC1P47018 478 aaKnown RBP15.48■□□□□ 0.07
TUB4YLR212C REV3P14284 1504 aa15.44■□□□□ 0.06
TUB4YLR212C ATG2P53855 1592 aa15.41■□□□□ 0.06
TUB4YLR212C TAF2P23255 1407 aa15.3■□□□□ 0.04
TUB4YLR212C SIN3P22579 1536 aa15.25■□□□□ 0.03
TUB4YLR212C SKI3P17883 1432 aaKnown RBP15.23■□□□□ 0.03
TUB4YLR212C BPT1P14772 1559 aa15.2■□□□□ 0.02
TUB4YLR212C SSK2P53599 1579 aa15.12■□□□□ 0.01
TUB4YLR212C DRS1P32892 752 aaKnown RBP15.09■□□□□ 0.01
TUB4YLR212C ESP1Q03018 1630 aa15.04■□□□□ -0
TUB4YLR212C YCF1P39109 1515 aaKnown RBP14.95□□□□□ -0.02
TUB4YLR212C UFD4P33202 1483 aa14.94□□□□□ -0.02
TUB4YLR212C YPK9Q12697 1472 aa14.89□□□□□ -0.03
TUB4YLR212C SCC2Q04002 1493 aa14.87□□□□□ -0.03
TUB4YLR212C MYO2P19524 1574 aaKnown RBP14.83□□□□□ -0.03
TUB4YLR212C RPO31P04051 1460 aa14.78□□□□□ -0.04
TUB4YLR212C CHD1P32657 1468 aa14.68□□□□□ -0.06
TUB4YLR212C CDC25P04821 1589 aa14.65□□□□□ -0.06
TUB4YLR212C TY2B-LR1P0C2J3 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-FP0CX63 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-GR2P0CX64 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-CP25384 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-DR2Q03494 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY1B-DR1Q03855 1755 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-DR3Q07791 1770 aaKnown RBP14.62□□□□□ -0.07
TUB4YLR212C TY2B-OR1Q12113 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-DR1Q12472 1770 aa14.62□□□□□ -0.07
TUB4YLR212C TY2B-OR2Q12501 1770 aa14.62□□□□□ -0.07
TUB4YLR212C RQC2Q12532 1038 aaKnown RBP14.61□□□□□ -0.07
TUB4YLR212C DNF1P32660 1571 aa14.59□□□□□ -0.07
TUB4YLR212C TOP2P06786 1428 aaKnown RBP14.56□□□□□ -0.08
TUB4YLR212C TY1B-BRQ12193 1756 aa14.54□□□□□ -0.08
TUB4YLR212C TY1B-GR3Q12316 1755 aa14.54□□□□□ -0.08
TUB4YLR212C TY1B-ORQ92393 1755 aa14.54□□□□□ -0.08
TUB4YLR212C PAN1P32521 1480 aa14.52□□□□□ -0.08
TUB4YLR212C MET5P47169 1442 aa14.52□□□□□ -0.08
TUB4YLR212C ESC1Q03661 1658 aaKnown RBP14.52□□□□□ -0.08
TUB4YLR212C RKR1Q04781 1562 aa14.48□□□□□ -0.09
TUB4YLR212C POL1P13382 1468 aa14.46□□□□□ -0.09
TUB4YLR212C TY2B-BQ12491 1770 aa14.44□□□□□ -0.1
TUB4YLR212C TY1B-DR3Q99231 1755 aa14.42□□□□□ -0.1
TUB4YLR212C MMS22Q06164 1454 aa14.42□□□□□ -0.1
TUB4YLR212C TY1B-HO13535 1793 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-DR5P0C2I2 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-DR6P0C2I3 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-LR2P0C2I5 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-LR3P0C2I6 1755 aaKnown RBP14.41□□□□□ -0.1
TUB4YLR212C TY1B-PR1P0C2I9 1755 aaKnown RBP14.41□□□□□ -0.1
TUB4YLR212C TY1B-PR2P0C2J0 1756 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-PR3P0C2J1 1755 aaKnown RBP14.41□□□□□ -0.1
TUB4YLR212C TY1B-JR1P47098 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-ML2Q03434 1755 aaKnown RBP14.41□□□□□ -0.1
TUB4YLR212C TY1B-ER1Q03612 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-ML1Q04711 1755 aaKnown RBP14.41□□□□□ -0.1
TUB4YLR212C TY1B-GR2Q12269 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-OLQ12273 1755 aa14.41□□□□□ -0.1
TUB4YLR212C TY1B-PLQ12414 1755 aaKnown RBP14.41□□□□□ -0.1
TUB4YLR212C RPA190P10964 1664 aaKnown RBP14.4□□□□□ -0.1
TUB4YLR212C STU1P38198 1513 aa14.36□□□□□ -0.11
TUB4YLR212C LTE1P07866 1435 aa14.35□□□□□ -0.11
TUB4YLR212C YOR1P53049 1477 aa14.34□□□□□ -0.11
TUB4YLR212C SMC4Q12267 1418 aa14.34□□□□□ -0.11
TUB4YLR212C TRM732Q03496 1420 aa14.32□□□□□ -0.12
TUB4YLR212C SPP41P38904 1435 aa14.27□□□□□ -0.12
TUB4YLR212C GEA2P39993 1459 aaKnown RBP14.18□□□□□ -0.14
TUB4YLR212C NUP159P40477 1460 aa14.18□□□□□ -0.14
TUB4YLR212C BNI1P41832 1953 aa14.17□□□□□ -0.14
TUB4YLR212C TSC11P40061 1430 aa14.17□□□□□ -0.14
TUB4YLR212C ITT1Q04638 464 aa14.15□□□□□ -0.14
TUB4YLR212C VTH1P40438 1549 aa14.13□□□□□ -0.15
TUB4YLR212C VTH2P40890 1549 aa14.13□□□□□ -0.15
TUB4YLR212C TY1B-JR2P47100 1755 aaKnown RBP14.13□□□□□ -0.15
TUB4YLR212C TY1B-ER2Q03619 1755 aa14.13□□□□□ -0.15
TUB4YLR212C TY1B-MR1Q04214 1755 aa14.13□□□□□ -0.15
TUB4YLR212C TY1B-MR2Q04670 1755 aaKnown RBP14.13□□□□□ -0.15
TUB4YLR212C TY1B-LR1Q12088 1755 aaKnown RBP14.13□□□□□ -0.15
TUB4YLR212C TY1B-NL1Q12112 1755 aa14.13□□□□□ -0.15
TUB4YLR212C TY1B-GR1Q12141 1755 aa14.13□□□□□ -0.15
TUB4YLR212C TY1B-BLQ12490 1755 aa14.13□□□□□ -0.15
TUB4YLR212C YRF1-1P0CX20 1796 aa14.12□□□□□ -0.15
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms