RNA–Protein interactions for RNA: YLR121C

YPS3, Transcript of Aspartic protease, yeastyeast

Gene YPS3, Length 1,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPS3YLR121C SGS1P35187 1447 aa16.26■□□□□ 0.19
YPS3YLR121C INO80P53115 1489 aa15.93■□□□□ 0.14
YPS3YLR121C TCB3Q03640 1545 aaKnown RBP15.73■□□□□ 0.11
YPS3YLR121C TY1B-DR4Q07793 1604 aa15.59■□□□□ 0.09
YPS3YLR121C SPA2P23201 1466 aaKnown RBP15.59■□□□□ 0.09
YPS3YLR121C SSN2P38931 1420 aa15.55■□□□□ 0.08
YPS3YLR121C MON2P48563 1636 aaPredicted RBP15.49■□□□□ 0.07
YPS3YLR121C HSL1P34244 1518 aa15.29■□□□□ 0.04
YPS3YLR121C SPT6P23615 1451 aaKnown RBP15.23■□□□□ 0.03
YPS3YLR121C SWR1Q05471 1514 aa15.21■□□□□ 0.03
YPS3YLR121C DRS1P32892 752 aaKnown RBP15.06■□□□□ 0
YPS3YLR121C HIR3P47171 1648 aa15.02■□□□□ -0
YPS3YLR121C XRN1P22147 1528 aaKnown RBP14.91□□□□□ -0.02
YPS3YLR121C DNA2P38859 1522 aa14.74□□□□□ -0.05
YPS3YLR121C REV3P14284 1504 aa14.71□□□□□ -0.05
YPS3YLR121C KOG1P38873 1557 aa14.69□□□□□ -0.06
YPS3YLR121C THO2P53552 1597 aaKnown RBP14.61□□□□□ -0.07
YPS3YLR121C SIN3P22579 1536 aa14.61□□□□□ -0.07
YPS3YLR121C SSK2P53599 1579 aa14.54□□□□□ -0.08
YPS3YLR121C TAF2P23255 1407 aa14.52□□□□□ -0.09
YPS3YLR121C BUD4P47136 1447 aa14.45□□□□□ -0.1
YPS3YLR121C ESP1Q03018 1630 aa14.44□□□□□ -0.1
YPS3YLR121C ECM5Q03214 1411 aa14.41□□□□□ -0.1
YPS3YLR121C ATG2P53855 1592 aa14.38□□□□□ -0.11
YPS3YLR121C MYO2P19524 1574 aaKnown RBP14.35□□□□□ -0.11
YPS3YLR121C SKI3P17883 1432 aaKnown RBP14.27□□□□□ -0.12
YPS3YLR121C PEP1P32319 1579 aa14.23□□□□□ -0.13
YPS3YLR121C MDS3P53094 1487 aa14.21□□□□□ -0.13
YPS3YLR121C YPK9Q12697 1472 aa14.16□□□□□ -0.14
YPS3YLR121C POL1P13382 1468 aa14.11□□□□□ -0.15
YPS3YLR121C STU1P38198 1513 aa14.06□□□□□ -0.16
YPS3YLR121C SCC2Q04002 1493 aa14.05□□□□□ -0.16
YPS3YLR121C CHD1P32657 1468 aa14□□□□□ -0.17
YPS3YLR121C RKR1Q04781 1562 aa13.99□□□□□ -0.17
YPS3YLR121C RPO31P04051 1460 aa13.96□□□□□ -0.17
YPS3YLR121C MMS22Q06164 1454 aa13.96□□□□□ -0.17
YPS3YLR121C BPT1P14772 1559 aa13.93□□□□□ -0.18
YPS3YLR121C UFD4P33202 1483 aa13.93□□□□□ -0.18
YPS3YLR121C YOR1P53049 1477 aa13.91□□□□□ -0.18
YPS3YLR121C YTA7P40340 1379 aa13.91□□□□□ -0.18
YPS3YLR121C TY2B-LR1P0C2J3 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-FP0CX63 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-GR2P0CX64 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-CP25384 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-DR2Q03494 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY1B-DR1Q03855 1755 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-DR3Q07791 1770 aaKnown RBP13.9□□□□□ -0.18
YPS3YLR121C TY2B-OR1Q12113 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-DR1Q12472 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TY2B-OR2Q12501 1770 aa13.9□□□□□ -0.18
YPS3YLR121C TOP2P06786 1428 aaKnown RBP13.87□□□□□ -0.19
YPS3YLR121C YCF1P39109 1515 aaKnown RBP13.87□□□□□ -0.19
YPS3YLR121C TY1B-DR3Q99231 1755 aa13.84□□□□□ -0.19
YPS3YLR121C SMC4Q12267 1418 aa13.79□□□□□ -0.2
YPS3YLR121C TY2B-BQ12491 1770 aa13.79□□□□□ -0.2
YPS3YLR121C MYO4P32492 1471 aa13.78□□□□□ -0.2
YPS3YLR121C SAS10Q12136 610 aaPredicted RBP13.74□□□□□ -0.21
YPS3YLR121C TY1B-BRQ12193 1756 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-GR3Q12316 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-ORQ92393 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-HO13535 1793 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-DR5P0C2I2 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-DR6P0C2I3 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-LR2P0C2I5 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-LR3P0C2I6 1755 aaKnown RBP13.69□□□□□ -0.22
YPS3YLR121C TY1B-PR1P0C2I9 1755 aaKnown RBP13.69□□□□□ -0.22
YPS3YLR121C TY1B-PR2P0C2J0 1756 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-PR3P0C2J1 1755 aaKnown RBP13.69□□□□□ -0.22
YPS3YLR121C TY1B-JR1P47098 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-ML2Q03434 1755 aaKnown RBP13.69□□□□□ -0.22
YPS3YLR121C TY1B-ER1Q03612 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-ML1Q04711 1755 aaKnown RBP13.69□□□□□ -0.22
YPS3YLR121C TY1B-GR2Q12269 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-OLQ12273 1755 aa13.69□□□□□ -0.22
YPS3YLR121C TY1B-PLQ12414 1755 aaKnown RBP13.69□□□□□ -0.22
YPS3YLR121C SNQ2P32568 1501 aaKnown RBP13.61□□□□□ -0.23
YPS3YLR121C MLP2P40457 1679 aa13.58□□□□□ -0.24
YPS3YLR121C RQC2Q12532 1038 aaKnown RBP13.58□□□□□ -0.24
YPS3YLR121C CDC25P04821 1589 aa13.58□□□□□ -0.24
YPS3YLR121C SPP41P38904 1435 aa13.56□□□□□ -0.24
YPS3YLR121C STH1P32597 1359 aa13.55□□□□□ -0.24
YPS3YLR121C RSE1Q04693 1361 aaKnown RBP13.55□□□□□ -0.24
YPS3YLR121C TAF7Q05021 590 aa13.5□□□□□ -0.25
YPS3YLR121C PAN1P32521 1480 aa13.48□□□□□ -0.25
YPS3YLR121C VTH1P40438 1549 aa13.48□□□□□ -0.25
YPS3YLR121C VTH2P40890 1549 aa13.48□□□□□ -0.25
YPS3YLR121C PDR15Q04182 1529 aaKnown RBP13.48□□□□□ -0.25
YPS3YLR121C TRM732Q03496 1420 aa13.47□□□□□ -0.25
YPS3YLR121C ESC1Q03661 1658 aaKnown RBP13.46□□□□□ -0.25
YPS3YLR121C TY1B-JR2P47100 1755 aaKnown RBP13.46□□□□□ -0.25
YPS3YLR121C TY1B-ER2Q03619 1755 aa13.46□□□□□ -0.25
YPS3YLR121C TY1B-MR1Q04214 1755 aa13.46□□□□□ -0.25
YPS3YLR121C TY1B-MR2Q04670 1755 aaKnown RBP13.46□□□□□ -0.25
YPS3YLR121C TY1B-LR1Q12088 1755 aaKnown RBP13.46□□□□□ -0.25
YPS3YLR121C TY1B-NL1Q12112 1755 aa13.46□□□□□ -0.25
YPS3YLR121C TY1B-GR1Q12141 1755 aa13.46□□□□□ -0.25
YPS3YLR121C TY1B-BLQ12490 1755 aa13.46□□□□□ -0.25
YPS3YLR121C ULS1Q08562 1619 aa13.45□□□□□ -0.26
YPS3YLR121C TSC11P40061 1430 aa13.45□□□□□ -0.26
YPS3YLR121C IFH1P39520 1085 aa13.38□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms