RNA–Protein interactions for RNA: YLR110C

CCW12, Transcript of Cell wall mannoprotein, yeastyeast

Gene CCW12, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCW12YLR110C SGS1P35187 1447 aa13.26□□□□□ -0.29
CCW12YLR110C INO80P53115 1489 aa13.09□□□□□ -0.31
CCW12YLR110C MON2P48563 1636 aaPredicted RBP13.05□□□□□ -0.32
CCW12YLR110C TCB3Q03640 1545 aaKnown RBP13.01□□□□□ -0.33
CCW12YLR110C TY1B-DR4Q07793 1604 aa12.87□□□□□ -0.35
CCW12YLR110C SWR1Q05471 1514 aa12.7□□□□□ -0.38
CCW12YLR110C HSL1P34244 1518 aa12.57□□□□□ -0.4
CCW12YLR110C SPT6P23615 1451 aaKnown RBP12.55□□□□□ -0.4
CCW12YLR110C SSN2P38931 1420 aa12.54□□□□□ -0.4
CCW12YLR110C SPA2P23201 1466 aaKnown RBP12.52□□□□□ -0.41
CCW12YLR110C DNA2P38859 1522 aa12.42□□□□□ -0.42
CCW12YLR110C KOG1P38873 1557 aa12.35□□□□□ -0.43
CCW12YLR110C HIR3P47171 1648 aa12.34□□□□□ -0.43
CCW12YLR110C XRN1P22147 1528 aaKnown RBP12.21□□□□□ -0.45
CCW12YLR110C DRS1P32892 752 aaKnown RBP12.15□□□□□ -0.46
CCW12YLR110C REV3P14284 1504 aa12.04□□□□□ -0.48
CCW12YLR110C THO2P53552 1597 aaKnown RBP12.01□□□□□ -0.49
CCW12YLR110C BUD4P47136 1447 aa12.01□□□□□ -0.49
CCW12YLR110C ECM5Q03214 1411 aa12.01□□□□□ -0.49
CCW12YLR110C SIN3P22579 1536 aa11.94□□□□□ -0.5
CCW12YLR110C TAF2P23255 1407 aa11.87□□□□□ -0.51
CCW12YLR110C SSK2P53599 1579 aa11.85□□□□□ -0.51
CCW12YLR110C ATG2P53855 1592 aa11.83□□□□□ -0.52
CCW12YLR110C MDS3P53094 1487 aa11.82□□□□□ -0.52
CCW12YLR110C PEP1P32319 1579 aa11.78□□□□□ -0.52
CCW12YLR110C ESP1Q03018 1630 aa11.75□□□□□ -0.53
CCW12YLR110C SKI3P17883 1432 aaKnown RBP11.75□□□□□ -0.53
CCW12YLR110C MYO2P19524 1574 aaKnown RBP11.69□□□□□ -0.54
CCW12YLR110C RSE1Q04693 1361 aaKnown RBP11.61□□□□□ -0.55
CCW12YLR110C YPK9Q12697 1472 aa11.61□□□□□ -0.55
CCW12YLR110C SCC2Q04002 1493 aa11.53□□□□□ -0.56
CCW12YLR110C UFD4P33202 1483 aa11.48□□□□□ -0.57
CCW12YLR110C RPO31P04051 1460 aa11.47□□□□□ -0.57
CCW12YLR110C POL1P13382 1468 aa11.47□□□□□ -0.57
CCW12YLR110C BPT1P14772 1559 aa11.46□□□□□ -0.57
CCW12YLR110C STU1P38198 1513 aa11.4□□□□□ -0.59
CCW12YLR110C RKR1Q04781 1562 aa11.38□□□□□ -0.59
CCW12YLR110C YCF1P39109 1515 aaKnown RBP11.37□□□□□ -0.59
CCW12YLR110C TOP2P06786 1428 aaKnown RBP11.36□□□□□ -0.59
CCW12YLR110C TY2B-LR1P0C2J3 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-FP0CX63 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-GR2P0CX64 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-CP25384 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-DR2Q03494 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY1B-DR1Q03855 1755 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-DR3Q07791 1770 aaKnown RBP11.33□□□□□ -0.59
CCW12YLR110C TY2B-OR1Q12113 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-DR1Q12472 1770 aa11.33□□□□□ -0.59
CCW12YLR110C TY2B-OR2Q12501 1770 aa11.33□□□□□ -0.59
CCW12YLR110C YOR1P53049 1477 aa11.32□□□□□ -0.6
CCW12YLR110C MTC1P47018 478 aaKnown RBP11.32□□□□□ -0.6
CCW12YLR110C SMC4Q12267 1418 aa11.28□□□□□ -0.6
CCW12YLR110C YTA7P40340 1379 aa11.27□□□□□ -0.61
CCW12YLR110C TY1B-DR3Q99231 1755 aa11.24□□□□□ -0.61
CCW12YLR110C TY2B-BQ12491 1770 aa11.22□□□□□ -0.61
CCW12YLR110C CHD1P32657 1468 aa11.21□□□□□ -0.61
CCW12YLR110C CDC25P04821 1589 aa11.2□□□□□ -0.62
CCW12YLR110C RQC2Q12532 1038 aaKnown RBP11.2□□□□□ -0.62
CCW12YLR110C TY1B-BRQ12193 1756 aa11.2□□□□□ -0.62
CCW12YLR110C TY1B-GR3Q12316 1755 aa11.2□□□□□ -0.62
CCW12YLR110C TY1B-ORQ92393 1755 aa11.2□□□□□ -0.62
CCW12YLR110C MYO4P32492 1471 aa11.18□□□□□ -0.62
CCW12YLR110C TY1B-HO13535 1793 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-DR5P0C2I2 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-DR6P0C2I3 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-LR2P0C2I5 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-LR3P0C2I6 1755 aaKnown RBP11.16□□□□□ -0.62
CCW12YLR110C TY1B-PR1P0C2I9 1755 aaKnown RBP11.16□□□□□ -0.62
CCW12YLR110C TY1B-PR2P0C2J0 1756 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-PR3P0C2J1 1755 aaKnown RBP11.16□□□□□ -0.62
CCW12YLR110C TY1B-JR1P47098 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-ML2Q03434 1755 aaKnown RBP11.16□□□□□ -0.62
CCW12YLR110C TY1B-ER1Q03612 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-ML1Q04711 1755 aaKnown RBP11.16□□□□□ -0.62
CCW12YLR110C TY1B-GR2Q12269 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-OLQ12273 1755 aa11.16□□□□□ -0.62
CCW12YLR110C TY1B-PLQ12414 1755 aaKnown RBP11.16□□□□□ -0.62
CCW12YLR110C MMS22Q06164 1454 aa11.16□□□□□ -0.62
CCW12YLR110C PAN1P32521 1480 aa11.14□□□□□ -0.63
CCW12YLR110C SPP41P38904 1435 aa11.11□□□□□ -0.63
CCW12YLR110C ESC1Q03661 1658 aaKnown RBP11.08□□□□□ -0.64
CCW12YLR110C DNF1P32660 1571 aa11.05□□□□□ -0.64
CCW12YLR110C TSC11P40061 1430 aa11.04□□□□□ -0.64
CCW12YLR110C SAS10Q12136 610 aaPredicted RBP11.04□□□□□ -0.64
CCW12YLR110C VTH1P40438 1549 aa11.02□□□□□ -0.65
CCW12YLR110C VTH2P40890 1549 aa11.02□□□□□ -0.65
CCW12YLR110C SNQ2P32568 1501 aaKnown RBP11.01□□□□□ -0.65
CCW12YLR110C RPA190P10964 1664 aaKnown RBP11.01□□□□□ -0.65
CCW12YLR110C TRM732Q03496 1420 aa11.01□□□□□ -0.65
CCW12YLR110C STH1P32597 1359 aa10.98□□□□□ -0.65
CCW12YLR110C TY1B-JR2P47100 1755 aaKnown RBP10.96□□□□□ -0.65
CCW12YLR110C TY1B-ER2Q03619 1755 aa10.96□□□□□ -0.65
CCW12YLR110C TY1B-MR1Q04214 1755 aa10.96□□□□□ -0.65
CCW12YLR110C TY1B-MR2Q04670 1755 aaKnown RBP10.96□□□□□ -0.65
CCW12YLR110C TY1B-LR1Q12088 1755 aaKnown RBP10.96□□□□□ -0.65
CCW12YLR110C TY1B-NL1Q12112 1755 aa10.96□□□□□ -0.65
CCW12YLR110C TY1B-GR1Q12141 1755 aa10.96□□□□□ -0.65
CCW12YLR110C TY1B-BLQ12490 1755 aa10.96□□□□□ -0.65
CCW12YLR110C TAF7Q05021 590 aa10.95□□□□□ -0.66
CCW12YLR110C MLP2P40457 1679 aa10.92□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms