RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C MON2P48563 1636 aaPredicted RBP10.43□□□□□ -0.74
BUD28YLR062C INO80P53115 1489 aa10.34□□□□□ -0.75
BUD28YLR062C DRS1P32892 752 aaKnown RBP10.1□□□□□ -0.79
BUD28YLR062C MTC1P47018 478 aaKnown RBP10.1□□□□□ -0.79
BUD28YLR062C TY1B-DR4Q07793 1604 aa9.99□□□□□ -0.81
BUD28YLR062C TCB3Q03640 1545 aaKnown RBP9.98□□□□□ -0.81
BUD28YLR062C SWR1Q05471 1514 aa9.97□□□□□ -0.81
BUD28YLR062C SGS1P35187 1447 aa9.9□□□□□ -0.83
BUD28YLR062C DNA2P38859 1522 aa9.88□□□□□ -0.83
BUD28YLR062C KOG1P38873 1557 aa9.78□□□□□ -0.84
BUD28YLR062C HSL1P34244 1518 aa9.63□□□□□ -0.87
BUD28YLR062C SPT6P23615 1451 aaKnown RBP9.59□□□□□ -0.87
BUD28YLR062C SPA2P23201 1466 aaKnown RBP9.48□□□□□ -0.89
BUD28YLR062C HIR3P47171 1648 aa9.43□□□□□ -0.9
BUD28YLR062C RSE1Q04693 1361 aaKnown RBP9.38□□□□□ -0.91
BUD28YLR062C THO2P53552 1597 aaKnown RBP9.32□□□□□ -0.92
BUD28YLR062C ECM5Q03214 1411 aa9.31□□□□□ -0.92
BUD28YLR062C BUD4P47136 1447 aa9.27□□□□□ -0.93
BUD28YLR062C XRN1P22147 1528 aaKnown RBP9.26□□□□□ -0.93
BUD28YLR062C SSN2P38931 1420 aa9.19□□□□□ -0.94
BUD28YLR062C MDS3P53094 1487 aa9.18□□□□□ -0.94
BUD28YLR062C PEP1P32319 1579 aa9.14□□□□□ -0.95
BUD28YLR062C ATG2P53855 1592 aa9.12□□□□□ -0.95
BUD28YLR062C REV3P14284 1504 aa9.1□□□□□ -0.95
BUD28YLR062C SIN3P22579 1536 aa9.03□□□□□ -0.96
BUD28YLR062C SSK2P53599 1579 aa8.96□□□□□ -0.97
BUD28YLR062C TAF2P23255 1407 aa8.95□□□□□ -0.98
BUD28YLR062C BPT1P14772 1559 aa8.94□□□□□ -0.98
BUD28YLR062C ESP1Q03018 1630 aa8.94□□□□□ -0.98
BUD28YLR062C SKI3P17883 1432 aaKnown RBP8.9□□□□□ -0.98
BUD28YLR062C MYO2P19524 1574 aaKnown RBP8.79□□□□□ -1
BUD28YLR062C YCF1P39109 1515 aaKnown RBP8.78□□□□□ -1
BUD28YLR062C YPK9Q12697 1472 aa8.77□□□□□ -1
BUD28YLR062C UFD4P33202 1483 aa8.77□□□□□ -1.01
BUD28YLR062C SCC2Q04002 1493 aa8.76□□□□□ -1.01
BUD28YLR062C TY2B-LR1P0C2J3 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-FP0CX63 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-GR2P0CX64 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-CP25384 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-DR2Q03494 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY1B-DR1Q03855 1755 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-DR3Q07791 1770 aaKnown RBP8.73□□□□□ -1.01
BUD28YLR062C TY2B-OR1Q12113 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-DR1Q12472 1770 aa8.73□□□□□ -1.01
BUD28YLR062C TY2B-OR2Q12501 1770 aa8.73□□□□□ -1.01
BUD28YLR062C BFR2Q06631 534 aaKnown RBP8.71□□□□□ -1.02
BUD28YLR062C RPO31P04051 1460 aa8.7□□□□□ -1.02
BUD28YLR062C TY1B-BRQ12193 1756 aa8.67□□□□□ -1.02
BUD28YLR062C TY1B-GR3Q12316 1755 aa8.67□□□□□ -1.02
BUD28YLR062C TY1B-ORQ92393 1755 aa8.67□□□□□ -1.02
BUD28YLR062C CDC25P04821 1589 aa8.65□□□□□ -1.03
BUD28YLR062C ESC1Q03661 1658 aaKnown RBP8.63□□□□□ -1.03
BUD28YLR062C TY2B-BQ12491 1770 aa8.63□□□□□ -1.03
BUD28YLR062C TY1B-DR3Q99231 1755 aa8.62□□□□□ -1.03
BUD28YLR062C TY1B-HO13535 1793 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-DR5P0C2I2 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-DR6P0C2I3 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-LR2P0C2I5 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-LR3P0C2I6 1755 aaKnown RBP8.61□□□□□ -1.03
BUD28YLR062C TY1B-PR1P0C2I9 1755 aaKnown RBP8.61□□□□□ -1.03
BUD28YLR062C TY1B-PR2P0C2J0 1756 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-PR3P0C2J1 1755 aaKnown RBP8.61□□□□□ -1.03
BUD28YLR062C TY1B-JR1P47098 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-ML2Q03434 1755 aaKnown RBP8.61□□□□□ -1.03
BUD28YLR062C TY1B-ER1Q03612 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-ML1Q04711 1755 aaKnown RBP8.61□□□□□ -1.03
BUD28YLR062C TY1B-GR2Q12269 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-OLQ12273 1755 aa8.61□□□□□ -1.03
BUD28YLR062C TY1B-PLQ12414 1755 aaKnown RBP8.61□□□□□ -1.03
BUD28YLR062C CHD1P32657 1468 aa8.6□□□□□ -1.03
BUD28YLR062C DIP2Q12220 943 aaPredicted RBP8.6□□□□□ -1.03
BUD28YLR062C DNF1P32660 1571 aa8.58□□□□□ -1.04
BUD28YLR062C TOP2P06786 1428 aaKnown RBP8.56□□□□□ -1.04
BUD28YLR062C RKR1Q04781 1562 aa8.56□□□□□ -1.04
BUD28YLR062C RPA190P10964 1664 aaKnown RBP8.55□□□□□ -1.04
BUD28YLR062C PAN1P32521 1480 aa8.54□□□□□ -1.04
BUD28YLR062C POL1P13382 1468 aa8.52□□□□□ -1.05
BUD28YLR062C FAP1P53971 965 aa8.52□□□□□ -1.05
BUD28YLR062C MET5P47169 1442 aa8.51□□□□□ -1.05
BUD28YLR062C RQC2Q12532 1038 aaKnown RBP8.48□□□□□ -1.05
BUD28YLR062C YOR1P53049 1477 aa8.46□□□□□ -1.05
BUD28YLR062C MMS22Q06164 1454 aa8.46□□□□□ -1.05
BUD28YLR062C STU1P38198 1513 aa8.45□□□□□ -1.06
BUD28YLR062C SMC4Q12267 1418 aa8.44□□□□□ -1.06
BUD28YLR062C TY1B-JR2P47100 1755 aaKnown RBP8.43□□□□□ -1.06
BUD28YLR062C TY1B-ER2Q03619 1755 aa8.43□□□□□ -1.06
BUD28YLR062C TY1B-MR1Q04214 1755 aa8.43□□□□□ -1.06
BUD28YLR062C TY1B-MR2Q04670 1755 aaKnown RBP8.43□□□□□ -1.06
BUD28YLR062C TY1B-LR1Q12088 1755 aaKnown RBP8.43□□□□□ -1.06
BUD28YLR062C TY1B-NL1Q12112 1755 aa8.43□□□□□ -1.06
BUD28YLR062C TY1B-GR1Q12141 1755 aa8.43□□□□□ -1.06
BUD28YLR062C TY1B-BLQ12490 1755 aa8.43□□□□□ -1.06
BUD28YLR062C YRF1-1P0CX20 1796 aa8.4□□□□□ -1.07
BUD28YLR062C YRF1-5P0CX21 1796 aa8.4□□□□□ -1.07
BUD28YLR062C YRF1-8P0CX22 1796 aa8.4□□□□□ -1.07
BUD28YLR062C AVT3P36062 692 aa8.39□□□□□ -1.07
BUD28YLR062C LTE1P07866 1435 aa8.38□□□□□ -1.07
BUD28YLR062C SPP41P38904 1435 aa8.37□□□□□ -1.07
BUD28YLR062C TRM732Q03496 1420 aa8.37□□□□□ -1.07
BUD28YLR062C BNI1P41832 1953 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms