RNA–Protein interactions for RNA: YLR015W

BRE2, Transcript of Subunit of COMPASS (Set1C) complex, yeastyeast

Gene BRE2, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE2YLR015W MTC1P47018 478 aaKnown RBP11.65□□□□□ -0.55
BRE2YLR015W DRS1P32892 752 aaKnown RBP11.03□□□□□ -0.64
BRE2YLR015W FAP1P53971 965 aa10.76□□□□□ -0.69
BRE2YLR015W PRY3P47033 881 aa10.16□□□□□ -0.78
BRE2YLR015W PRI1P10363 409 aa10.02□□□□□ -0.8
BRE2YLR015W AAD16Q02895 342 aa9.97□□□□□ -0.81
BRE2YLR015W BFR2Q06631 534 aaKnown RBP9.85□□□□□ -0.83
BRE2YLR015W YCK3P39962 524 aa9.73□□□□□ -0.85
BRE2YLR015W TFA1P36100 482 aa9.72□□□□□ -0.85
BRE2YLR015W ISW2Q08773 1120 aa9.67□□□□□ -0.86
BRE2YLR015W RPG1P38249 964 aaKnown RBP9.61□□□□□ -0.87
BRE2YLR015W HAA1Q12753 694 aaKnown RBP9.52□□□□□ -0.88
BRE2YLR015W TSR3Q12094 313 aaKnown RBP9.43□□□□□ -0.9
BRE2YLR015W DIP2Q12220 943 aaPredicted RBP9.36□□□□□ -0.91
BRE2YLR015W AVT3P36062 692 aa9.21□□□□□ -0.94
BRE2YLR015W RSE1Q04693 1361 aaKnown RBP9.12□□□□□ -0.95
BRE2YLR015W RQC2Q12532 1038 aaKnown RBP9.03□□□□□ -0.96
BRE2YLR015W MRPL32P25348 183 aa9.02□□□□□ -0.97
BRE2YLR015W RPL17AP05740 184 aaKnown RBP8.86□□□□□ -0.99
BRE2YLR015W RPL17BP46990 184 aaKnown RBP8.86□□□□□ -0.99
BRE2YLR015W REB1P21538 810 aa8.8□□□□□ -1
BRE2YLR015W YGL015CP33199 130 aa8.76□□□□□ -1.01
BRE2YLR015W SGS1P35187 1447 aa8.6□□□□□ -1.03
BRE2YLR015W CDC27P38042 758 aa8.59□□□□□ -1.03
BRE2YLR015W SPT21P35209 758 aa8.53□□□□□ -1.04
BRE2YLR015W YKR023WP36119 530 aaKnown RBP8.5□□□□□ -1.05
BRE2YLR015W UBP10P53874 792 aaPredicted RBP8.34□□□□□ -1.07
BRE2YLR015W MAP2P38174 421 aaKnown RBP8.33□□□□□ -1.08
BRE2YLR015W TFC8Q12308 588 aa8.3□□□□□ -1.08
BRE2YLR015W HOP09932 586 aa8.29□□□□□ -1.08
BRE2YLR015W INO80P53115 1489 aa8.28□□□□□ -1.08
BRE2YLR015W DMA1P38823 416 aa8.27□□□□□ -1.09
BRE2YLR015W SPA2P23201 1466 aaKnown RBP8.27□□□□□ -1.09
BRE2YLR015W SSN2P38931 1420 aa8.27□□□□□ -1.09
BRE2YLR015W DCD1P06773 312 aa8.26□□□□□ -1.09
BRE2YLR015W BUD31P25337 157 aaPredicted RBP8.21□□□□□ -1.1
BRE2YLR015W TAF7Q05021 590 aa8.19□□□□□ -1.1
BRE2YLR015W RIM101P33400 625 aa8.14□□□□□ -1.11
BRE2YLR015W TCB3Q03640 1545 aaKnown RBP8.13□□□□□ -1.11
BRE2YLR015W SCY1P53009 804 aa8.09□□□□□ -1.11
BRE2YLR015W PTP3P40048 928 aa8.05□□□□□ -1.12
BRE2YLR015W BCH2P36122 765 aa8.02□□□□□ -1.13
BRE2YLR015W TY1B-DR4Q07793 1604 aa8□□□□□ -1.13
BRE2YLR015W SLX5P32828 619 aaKnown RBP7.98□□□□□ -1.13
BRE2YLR015W TGL3P40308 642 aa7.98□□□□□ -1.13
BRE2YLR015W TIF4632P39936 914 aaKnown RBP7.95□□□□□ -1.14
BRE2YLR015W LEO1P38439 464 aa7.92□□□□□ -1.14
BRE2YLR015W HSL1P34244 1518 aa7.91□□□□□ -1.14
BRE2YLR015W SPT6P23615 1451 aaKnown RBP7.88□□□□□ -1.15
BRE2YLR015W OXP1P28273 1286 aa7.88□□□□□ -1.15
BRE2YLR015W SSP1P38871 571 aa7.85□□□□□ -1.15
BRE2YLR015W MON2P48563 1636 aaPredicted RBP7.82□□□□□ -1.16
BRE2YLR015W HIR3P47171 1648 aa7.79□□□□□ -1.16
BRE2YLR015W UBP9P39967 754 aa7.78□□□□□ -1.16
BRE2YLR015W EPS1P40557 701 aa7.78□□□□□ -1.16
BRE2YLR015W XRN1P22147 1528 aaKnown RBP7.78□□□□□ -1.16
BRE2YLR015W SWR1Q05471 1514 aa7.78□□□□□ -1.16
BRE2YLR015W BDF1P35817 686 aa7.77□□□□□ -1.17
BRE2YLR015W SIS1P25294 352 aaKnown RBP7.73□□□□□ -1.17
BRE2YLR015W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
BRE2YLR015W MST1P07236 462 aa7.66□□□□□ -1.18
BRE2YLR015W REV3P14284 1504 aa7.65□□□□□ -1.18
BRE2YLR015W YAH1Q12184 172 aaKnown RBP7.65□□□□□ -1.18
BRE2YLR015W YIL055CP40523 627 aaKnown RBP7.64□□□□□ -1.19
BRE2YLR015W TAF2P23255 1407 aa7.63□□□□□ -1.19
BRE2YLR015W LEU3P08638 886 aa7.62□□□□□ -1.19
BRE2YLR015W SAS10Q12136 610 aaPredicted RBP7.62□□□□□ -1.19
BRE2YLR015W RSM7P47150 247 aa7.59□□□□□ -1.19
BRE2YLR015W SIN3P22579 1536 aa7.58□□□□□ -1.2
BRE2YLR015W NSR1P27476 414 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
BRE2YLR015W YLR271WQ06152 274 aa7.57□□□□□ -1.2
BRE2YLR015W THO2P53552 1597 aaKnown RBP7.56□□□□□ -1.2
BRE2YLR015W SSK2P53599 1579 aa7.55□□□□□ -1.2
BRE2YLR015W AI2P03876 854 aa7.55□□□□□ -1.2
BRE2YLR015W YOR238WQ08634 303 aa7.55□□□□□ -1.2
BRE2YLR015W BBC1P47068 1157 aa7.53□□□□□ -1.2
BRE2YLR015W YBL029C-AQ3E756 94 aa7.53□□□□□ -1.2
BRE2YLR015W SKI3P17883 1432 aaKnown RBP7.51□□□□□ -1.21
BRE2YLR015W MGA2P40578 1113 aa7.51□□□□□ -1.21
BRE2YLR015W DNA2P38859 1522 aa7.51□□□□□ -1.21
BRE2YLR015W CHD1P32657 1468 aa7.47□□□□□ -1.21
BRE2YLR015W MMS22Q06164 1454 aa7.47□□□□□ -1.21
BRE2YLR015W ESP1Q03018 1630 aa7.47□□□□□ -1.21
BRE2YLR015W YAP5P40574 245 aa7.46□□□□□ -1.22
BRE2YLR015W BUD4P47136 1447 aa7.45□□□□□ -1.22
BRE2YLR015W ECM5Q03214 1411 aa7.45□□□□□ -1.22
BRE2YLR015W VNX1P42839 908 aa7.45□□□□□ -1.22
BRE2YLR015W MYO2P19524 1574 aaKnown RBP7.43□□□□□ -1.22
BRE2YLR015W KOG1P38873 1557 aa7.43□□□□□ -1.22
BRE2YLR015W STU1P38198 1513 aa7.42□□□□□ -1.22
BRE2YLR015W POL1P13382 1468 aa7.41□□□□□ -1.22
BRE2YLR015W ATG2P53855 1592 aa7.4□□□□□ -1.22
BRE2YLR015W RPN1P38764 993 aaKnown RBP7.38□□□□□ -1.23
BRE2YLR015W YPK9Q12697 1472 aa7.38□□□□□ -1.23
BRE2YLR015W PSD2P53037 1138 aaKnown RBP7.37□□□□□ -1.23
BRE2YLR015W YTA7P40340 1379 aa7.37□□□□□ -1.23
BRE2YLR015W CST9Q06032 482 aa7.36□□□□□ -1.23
BRE2YLR015W SPP1Q03012 353 aa7.35□□□□□ -1.23
BRE2YLR015W WSC3Q12215 556 aa7.35□□□□□ -1.23
BRE2YLR015W BPT1P14772 1559 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms