RNA–Protein interactions for RNA: YLL061W

MMP1, Transcript of High-affinity S-methylmethionine permease, yeastyeast

Gene MMP1, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMP1YLL061W INO80P53115 1489 aa10.65□□□□□ -0.7
MMP1YLL061W MON2P48563 1636 aaPredicted RBP10.61□□□□□ -0.71
MMP1YLL061W TCB3Q03640 1545 aaKnown RBP10.2□□□□□ -0.78
MMP1YLL061W SWR1Q05471 1514 aa10.19□□□□□ -0.78
MMP1YLL061W SGS1P35187 1447 aa10.16□□□□□ -0.78
MMP1YLL061W DNA2P38859 1522 aa10.14□□□□□ -0.79
MMP1YLL061W TY1B-DR4Q07793 1604 aa10.13□□□□□ -0.79
MMP1YLL061W KOG1P38873 1557 aa10□□□□□ -0.81
MMP1YLL061W HSL1P34244 1518 aa9.85□□□□□ -0.83
MMP1YLL061W SPT6P23615 1451 aaKnown RBP9.85□□□□□ -0.83
MMP1YLL061W SPA2P23201 1466 aaKnown RBP9.8□□□□□ -0.84
MMP1YLL061W RSE1Q04693 1361 aaKnown RBP9.73□□□□□ -0.85
MMP1YLL061W HIR3P47171 1648 aa9.64□□□□□ -0.87
MMP1YLL061W ECM5Q03214 1411 aa9.58□□□□□ -0.88
MMP1YLL061W BUD4P47136 1447 aa9.52□□□□□ -0.89
MMP1YLL061W XRN1P22147 1528 aaKnown RBP9.51□□□□□ -0.89
MMP1YLL061W THO2P53552 1597 aaKnown RBP9.5□□□□□ -0.89
MMP1YLL061W SSN2P38931 1420 aa9.43□□□□□ -0.9
MMP1YLL061W MDS3P53094 1487 aa9.41□□□□□ -0.9
MMP1YLL061W MTC1P47018 478 aaKnown RBP9.37□□□□□ -0.91
MMP1YLL061W REV3P14284 1504 aa9.33□□□□□ -0.92
MMP1YLL061W PEP1P32319 1579 aa9.29□□□□□ -0.92
MMP1YLL061W TAF2P23255 1407 aa9.28□□□□□ -0.92
MMP1YLL061W ATG2P53855 1592 aa9.28□□□□□ -0.92
MMP1YLL061W SKI3P17883 1432 aaKnown RBP9.22□□□□□ -0.93
MMP1YLL061W SIN3P22579 1536 aa9.18□□□□□ -0.94
MMP1YLL061W BPT1P14772 1559 aa9.16□□□□□ -0.94
MMP1YLL061W DRS1P32892 752 aaKnown RBP9.16□□□□□ -0.94
MMP1YLL061W SSK2P53599 1579 aa9.13□□□□□ -0.95
MMP1YLL061W ESP1Q03018 1630 aa9.08□□□□□ -0.96
MMP1YLL061W UFD4P33202 1483 aa9.01□□□□□ -0.97
MMP1YLL061W YCF1P39109 1515 aaKnown RBP9□□□□□ -0.97
MMP1YLL061W MYO2P19524 1574 aaKnown RBP8.98□□□□□ -0.97
MMP1YLL061W YPK9Q12697 1472 aa8.97□□□□□ -0.97
MMP1YLL061W SCC2Q04002 1493 aa8.96□□□□□ -0.98
MMP1YLL061W RQC2Q12532 1038 aaKnown RBP8.9□□□□□ -0.98
MMP1YLL061W RPO31P04051 1460 aa8.89□□□□□ -0.99
MMP1YLL061W CDC25P04821 1589 aa8.83□□□□□ -1
MMP1YLL061W CHD1P32657 1468 aa8.83□□□□□ -1
MMP1YLL061W TY2B-LR1P0C2J3 1770 aa8.81□□□□□ -1
MMP1YLL061W TY2B-FP0CX63 1770 aa8.81□□□□□ -1
MMP1YLL061W TY2B-GR2P0CX64 1770 aa8.81□□□□□ -1
MMP1YLL061W TY2B-CP25384 1770 aa8.81□□□□□ -1
MMP1YLL061W TY2B-DR2Q03494 1770 aa8.81□□□□□ -1
MMP1YLL061W TY1B-DR1Q03855 1755 aa8.81□□□□□ -1
MMP1YLL061W TY2B-DR3Q07791 1770 aaKnown RBP8.81□□□□□ -1
MMP1YLL061W TY2B-OR1Q12113 1770 aa8.81□□□□□ -1
MMP1YLL061W TY2B-DR1Q12472 1770 aa8.81□□□□□ -1
MMP1YLL061W TY2B-OR2Q12501 1770 aa8.81□□□□□ -1
MMP1YLL061W ESC1Q03661 1658 aaKnown RBP8.78□□□□□ -1
MMP1YLL061W TOP2P06786 1428 aaKnown RBP8.77□□□□□ -1.01
MMP1YLL061W DNF1P32660 1571 aa8.77□□□□□ -1.01
MMP1YLL061W RKR1Q04781 1562 aa8.76□□□□□ -1.01
MMP1YLL061W PAN1P32521 1480 aa8.75□□□□□ -1.01
MMP1YLL061W TY1B-BRQ12193 1756 aa8.75□□□□□ -1.01
MMP1YLL061W TY1B-GR3Q12316 1755 aa8.75□□□□□ -1.01
MMP1YLL061W TY1B-ORQ92393 1755 aa8.75□□□□□ -1.01
MMP1YLL061W POL1P13382 1468 aa8.72□□□□□ -1.01
MMP1YLL061W MET5P47169 1442 aa8.71□□□□□ -1.02
MMP1YLL061W TY2B-BQ12491 1770 aa8.7□□□□□ -1.02
MMP1YLL061W MMS22Q06164 1454 aa8.7□□□□□ -1.02
MMP1YLL061W STU1P38198 1513 aa8.69□□□□□ -1.02
MMP1YLL061W TY1B-DR3Q99231 1755 aa8.69□□□□□ -1.02
MMP1YLL061W TY1B-HO13535 1793 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-DR5P0C2I2 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-DR6P0C2I3 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-LR2P0C2I5 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-LR3P0C2I6 1755 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W TY1B-PR1P0C2I9 1755 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W TY1B-PR2P0C2J0 1756 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-PR3P0C2J1 1755 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W TY1B-JR1P47098 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-ML2Q03434 1755 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W TY1B-ER1Q03612 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-ML1Q04711 1755 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W TY1B-GR2Q12269 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-OLQ12273 1755 aa8.67□□□□□ -1.02
MMP1YLL061W TY1B-PLQ12414 1755 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W RPA190P10964 1664 aaKnown RBP8.67□□□□□ -1.02
MMP1YLL061W YOR1P53049 1477 aa8.66□□□□□ -1.02
MMP1YLL061W TRM732Q03496 1420 aa8.65□□□□□ -1.02
MMP1YLL061W SMC4Q12267 1418 aa8.64□□□□□ -1.03
MMP1YLL061W LTE1P07866 1435 aa8.62□□□□□ -1.03
MMP1YLL061W SPP41P38904 1435 aa8.62□□□□□ -1.03
MMP1YLL061W GEA2P39993 1459 aaKnown RBP8.55□□□□□ -1.04
MMP1YLL061W NUP159P40477 1460 aa8.55□□□□□ -1.04
MMP1YLL061W TSC11P40061 1430 aa8.54□□□□□ -1.04
MMP1YLL061W VTH1P40438 1549 aa8.54□□□□□ -1.04
MMP1YLL061W VTH2P40890 1549 aa8.54□□□□□ -1.04
MMP1YLL061W NTE1Q04958 1679 aa8.52□□□□□ -1.05
MMP1YLL061W TY1B-JR2P47100 1755 aaKnown RBP8.51□□□□□ -1.05
MMP1YLL061W TY1B-ER2Q03619 1755 aa8.51□□□□□ -1.05
MMP1YLL061W TY1B-MR1Q04214 1755 aa8.51□□□□□ -1.05
MMP1YLL061W TY1B-MR2Q04670 1755 aaKnown RBP8.51□□□□□ -1.05
MMP1YLL061W TY1B-LR1Q12088 1755 aaKnown RBP8.51□□□□□ -1.05
MMP1YLL061W TY1B-NL1Q12112 1755 aa8.51□□□□□ -1.05
MMP1YLL061W TY1B-GR1Q12141 1755 aa8.51□□□□□ -1.05
MMP1YLL061W TY1B-BLQ12490 1755 aa8.51□□□□□ -1.05
MMP1YLL061W ITT1Q04638 464 aa8.5□□□□□ -1.05
MMP1YLL061W VPS15P22219 1454 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms