RNA–Protein interactions for RNA: YLL013C

PUF3, Transcript of Protein of the mitochondrial outer surface, yeastyeast

Gene PUF3, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF3YLL013C MON2P48563 1636 aaPredicted RBP11.57□□□□□ -0.56
PUF3YLL013C INO80P53115 1489 aa11.56□□□□□ -0.56
PUF3YLL013C TCB3Q03640 1545 aaKnown RBP11.12□□□□□ -0.63
PUF3YLL013C SWR1Q05471 1514 aa11.09□□□□□ -0.63
PUF3YLL013C TY1B-DR4Q07793 1604 aa11.06□□□□□ -0.64
PUF3YLL013C SGS1P35187 1447 aa11.06□□□□□ -0.64
PUF3YLL013C DNA2P38859 1522 aa11.02□□□□□ -0.65
PUF3YLL013C KOG1P38873 1557 aa10.91□□□□□ -0.66
PUF3YLL013C HSL1P34244 1518 aa10.72□□□□□ -0.69
PUF3YLL013C SPT6P23615 1451 aaKnown RBP10.72□□□□□ -0.69
PUF3YLL013C SPA2P23201 1466 aaKnown RBP10.66□□□□□ -0.7
PUF3YLL013C RSE1Q04693 1361 aaKnown RBP10.55□□□□□ -0.72
PUF3YLL013C HIR3P47171 1648 aa10.5□□□□□ -0.73
PUF3YLL013C ECM5Q03214 1411 aa10.4□□□□□ -0.74
PUF3YLL013C THO2P53552 1597 aaKnown RBP10.37□□□□□ -0.75
PUF3YLL013C BUD4P47136 1447 aa10.36□□□□□ -0.75
PUF3YLL013C XRN1P22147 1528 aaKnown RBP10.34□□□□□ -0.75
PUF3YLL013C SSN2P38931 1420 aa10.26□□□□□ -0.77
PUF3YLL013C MDS3P53094 1487 aa10.24□□□□□ -0.77
PUF3YLL013C REV3P14284 1504 aa10.16□□□□□ -0.78
PUF3YLL013C MTC1P47018 478 aaKnown RBP10.14□□□□□ -0.79
PUF3YLL013C PEP1P32319 1579 aa10.14□□□□□ -0.79
PUF3YLL013C ATG2P53855 1592 aa10.12□□□□□ -0.79
PUF3YLL013C TAF2P23255 1407 aa10.05□□□□□ -0.8
PUF3YLL013C SIN3P22579 1536 aa10.04□□□□□ -0.8
PUF3YLL013C SKI3P17883 1432 aaKnown RBP10.01□□□□□ -0.81
PUF3YLL013C BPT1P14772 1559 aa9.98□□□□□ -0.81
PUF3YLL013C SSK2P53599 1579 aa9.97□□□□□ -0.81
PUF3YLL013C DRS1P32892 752 aaKnown RBP9.96□□□□□ -0.81
PUF3YLL013C ESP1Q03018 1630 aa9.94□□□□□ -0.82
PUF3YLL013C MYO2P19524 1574 aaKnown RBP9.83□□□□□ -0.84
PUF3YLL013C YCF1P39109 1515 aaKnown RBP9.81□□□□□ -0.84
PUF3YLL013C UFD4P33202 1483 aa9.8□□□□□ -0.84
PUF3YLL013C YPK9Q12697 1472 aa9.78□□□□□ -0.84
PUF3YLL013C SCC2Q04002 1493 aa9.76□□□□□ -0.85
PUF3YLL013C RPO31P04051 1460 aa9.69□□□□□ -0.86
PUF3YLL013C TY2B-LR1P0C2J3 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-FP0CX63 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-GR2P0CX64 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-CP25384 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-DR2Q03494 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY1B-DR1Q03855 1755 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-DR3Q07791 1770 aaKnown RBP9.65□□□□□ -0.86
PUF3YLL013C TY2B-OR1Q12113 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-DR1Q12472 1770 aa9.65□□□□□ -0.86
PUF3YLL013C TY2B-OR2Q12501 1770 aa9.65□□□□□ -0.86
PUF3YLL013C CDC25P04821 1589 aa9.63□□□□□ -0.87
PUF3YLL013C RQC2Q12532 1038 aaKnown RBP9.63□□□□□ -0.87
PUF3YLL013C ESC1Q03661 1658 aaKnown RBP9.61□□□□□ -0.87
PUF3YLL013C CHD1P32657 1468 aa9.61□□□□□ -0.87
PUF3YLL013C TY1B-BRQ12193 1756 aa9.59□□□□□ -0.87
PUF3YLL013C TY1B-GR3Q12316 1755 aa9.59□□□□□ -0.87
PUF3YLL013C TY1B-ORQ92393 1755 aa9.59□□□□□ -0.87
PUF3YLL013C TOP2P06786 1428 aaKnown RBP9.56□□□□□ -0.88
PUF3YLL013C RKR1Q04781 1562 aa9.56□□□□□ -0.88
PUF3YLL013C DNF1P32660 1571 aa9.54□□□□□ -0.88
PUF3YLL013C TY2B-BQ12491 1770 aa9.54□□□□□ -0.88
PUF3YLL013C PAN1P32521 1480 aa9.53□□□□□ -0.88
PUF3YLL013C TY1B-DR3Q99231 1755 aa9.52□□□□□ -0.88
PUF3YLL013C POL1P13382 1468 aa9.52□□□□□ -0.89
PUF3YLL013C TY1B-HO13535 1793 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-DR5P0C2I2 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-DR6P0C2I3 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-LR2P0C2I5 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-LR3P0C2I6 1755 aaKnown RBP9.51□□□□□ -0.89
PUF3YLL013C TY1B-PR1P0C2I9 1755 aaKnown RBP9.51□□□□□ -0.89
PUF3YLL013C TY1B-PR2P0C2J0 1756 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-PR3P0C2J1 1755 aaKnown RBP9.51□□□□□ -0.89
PUF3YLL013C TY1B-JR1P47098 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-ML2Q03434 1755 aaKnown RBP9.51□□□□□ -0.89
PUF3YLL013C TY1B-ER1Q03612 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-ML1Q04711 1755 aaKnown RBP9.51□□□□□ -0.89
PUF3YLL013C TY1B-GR2Q12269 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-OLQ12273 1755 aa9.51□□□□□ -0.89
PUF3YLL013C TY1B-PLQ12414 1755 aaKnown RBP9.51□□□□□ -0.89
PUF3YLL013C MET5P47169 1442 aa9.5□□□□□ -0.89
PUF3YLL013C RPA190P10964 1664 aaKnown RBP9.48□□□□□ -0.89
PUF3YLL013C MMS22Q06164 1454 aa9.47□□□□□ -0.89
PUF3YLL013C STU1P38198 1513 aa9.46□□□□□ -0.89
PUF3YLL013C YOR1P53049 1477 aa9.44□□□□□ -0.9
PUF3YLL013C SMC4Q12267 1418 aa9.43□□□□□ -0.9
PUF3YLL013C TRM732Q03496 1420 aa9.41□□□□□ -0.9
PUF3YLL013C LTE1P07866 1435 aa9.38□□□□□ -0.91
PUF3YLL013C SPP41P38904 1435 aa9.37□□□□□ -0.91
PUF3YLL013C TY1B-JR2P47100 1755 aaKnown RBP9.33□□□□□ -0.92
PUF3YLL013C TY1B-ER2Q03619 1755 aa9.33□□□□□ -0.92
PUF3YLL013C TY1B-MR1Q04214 1755 aa9.33□□□□□ -0.92
PUF3YLL013C TY1B-MR2Q04670 1755 aaKnown RBP9.33□□□□□ -0.92
PUF3YLL013C TY1B-LR1Q12088 1755 aaKnown RBP9.33□□□□□ -0.92
PUF3YLL013C TY1B-NL1Q12112 1755 aa9.33□□□□□ -0.92
PUF3YLL013C TY1B-GR1Q12141 1755 aa9.33□□□□□ -0.92
PUF3YLL013C TY1B-BLQ12490 1755 aa9.33□□□□□ -0.92
PUF3YLL013C NTE1Q04958 1679 aa9.31□□□□□ -0.92
PUF3YLL013C GEA2P39993 1459 aaKnown RBP9.31□□□□□ -0.92
PUF3YLL013C VTH1P40438 1549 aa9.31□□□□□ -0.92
PUF3YLL013C VTH2P40890 1549 aa9.31□□□□□ -0.92
PUF3YLL013C TSC11P40061 1430 aa9.3□□□□□ -0.92
PUF3YLL013C NUP159P40477 1460 aa9.3□□□□□ -0.92
PUF3YLL013C YRF1-1P0CX20 1796 aa9.29□□□□□ -0.92
PUF3YLL013C YRF1-5P0CX21 1796 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms