RNA–Protein interactions for RNA: YKR105C

VBA5, Transcript of Plasma membrane protein of the Major Facilitator Superfamily (MFS), yeastyeast

Gene VBA5, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA5YKR105C SGS1P35187 1447 aa12.23□□□□□ -0.45
VBA5YKR105C INO80P53115 1489 aa12.07□□□□□ -0.48
VBA5YKR105C TCB3Q03640 1545 aaKnown RBP11.98□□□□□ -0.49
VBA5YKR105C MON2P48563 1636 aaPredicted RBP11.93□□□□□ -0.5
VBA5YKR105C TY1B-DR4Q07793 1604 aa11.82□□□□□ -0.52
VBA5YKR105C SWR1Q05471 1514 aa11.65□□□□□ -0.54
VBA5YKR105C SPA2P23201 1466 aaKnown RBP11.62□□□□□ -0.55
VBA5YKR105C SSN2P38931 1420 aa11.61□□□□□ -0.55
VBA5YKR105C HSL1P34244 1518 aa11.6□□□□□ -0.55
VBA5YKR105C SPT6P23615 1451 aaKnown RBP11.58□□□□□ -0.56
VBA5YKR105C HIR3P47171 1648 aa11.37□□□□□ -0.59
VBA5YKR105C DNA2P38859 1522 aa11.37□□□□□ -0.59
VBA5YKR105C KOG1P38873 1557 aa11.35□□□□□ -0.59
VBA5YKR105C DRS1P32892 752 aaKnown RBP11.31□□□□□ -0.6
VBA5YKR105C XRN1P22147 1528 aaKnown RBP11.29□□□□□ -0.6
VBA5YKR105C REV3P14284 1504 aa11.13□□□□□ -0.63
VBA5YKR105C THO2P53552 1597 aaKnown RBP11.08□□□□□ -0.64
VBA5YKR105C BUD4P47136 1447 aa11.06□□□□□ -0.64
VBA5YKR105C SIN3P22579 1536 aa11.02□□□□□ -0.64
VBA5YKR105C ECM5Q03214 1411 aa11.02□□□□□ -0.65
VBA5YKR105C TAF2P23255 1407 aa11.01□□□□□ -0.65
VBA5YKR105C SSK2P53599 1579 aa10.96□□□□□ -0.65
VBA5YKR105C ATG2P53855 1592 aa10.9□□□□□ -0.67
VBA5YKR105C MDS3P53094 1487 aa10.89□□□□□ -0.67
VBA5YKR105C ESP1Q03018 1630 aa10.88□□□□□ -0.67
VBA5YKR105C SKI3P17883 1432 aaKnown RBP10.88□□□□□ -0.67
VBA5YKR105C RQC2Q12532 1038 aaKnown RBP10.87□□□□□ -0.67
VBA5YKR105C MYO2P19524 1574 aaKnown RBP10.87□□□□□ -0.67
VBA5YKR105C PEP1P32319 1579 aa10.79□□□□□ -0.68
VBA5YKR105C YPK9Q12697 1472 aa10.71□□□□□ -0.7
VBA5YKR105C RSE1Q04693 1361 aaKnown RBP10.65□□□□□ -0.7
VBA5YKR105C SCC2Q04002 1493 aa10.63□□□□□ -0.71
VBA5YKR105C POL1P13382 1468 aa10.61□□□□□ -0.71
VBA5YKR105C UFD4P33202 1483 aa10.59□□□□□ -0.71
VBA5YKR105C STU1P38198 1513 aa10.58□□□□□ -0.72
VBA5YKR105C BPT1P14772 1559 aa10.57□□□□□ -0.72
VBA5YKR105C RPO31P04051 1460 aa10.56□□□□□ -0.72
VBA5YKR105C RKR1Q04781 1562 aa10.56□□□□□ -0.72
VBA5YKR105C BFR2Q06631 534 aaKnown RBP10.55□□□□□ -0.72
VBA5YKR105C TOP2P06786 1428 aaKnown RBP10.49□□□□□ -0.73
VBA5YKR105C MTC1P47018 478 aaKnown RBP10.49□□□□□ -0.73
VBA5YKR105C YCF1P39109 1515 aaKnown RBP10.48□□□□□ -0.73
VBA5YKR105C YOR1P53049 1477 aa10.48□□□□□ -0.73
VBA5YKR105C YTA7P40340 1379 aa10.46□□□□□ -0.74
VBA5YKR105C TY2B-LR1P0C2J3 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-FP0CX63 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-GR2P0CX64 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-CP25384 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-DR2Q03494 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY1B-DR1Q03855 1755 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-DR3Q07791 1770 aaKnown RBP10.44□□□□□ -0.74
VBA5YKR105C TY2B-OR1Q12113 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-DR1Q12472 1770 aa10.44□□□□□ -0.74
VBA5YKR105C TY2B-OR2Q12501 1770 aa10.44□□□□□ -0.74
VBA5YKR105C SMC4Q12267 1418 aa10.42□□□□□ -0.74
VBA5YKR105C MYO4P32492 1471 aa10.38□□□□□ -0.75
VBA5YKR105C CHD1P32657 1468 aa10.38□□□□□ -0.75
VBA5YKR105C MMS22Q06164 1454 aa10.38□□□□□ -0.75
VBA5YKR105C TY1B-DR3Q99231 1755 aa10.36□□□□□ -0.75
VBA5YKR105C CDC25P04821 1589 aa10.35□□□□□ -0.75
VBA5YKR105C TY2B-BQ12491 1770 aa10.34□□□□□ -0.75
VBA5YKR105C SAS10Q12136 610 aaPredicted RBP10.33□□□□□ -0.76
VBA5YKR105C TY1B-BRQ12193 1756 aa10.3□□□□□ -0.76
VBA5YKR105C TY1B-GR3Q12316 1755 aa10.3□□□□□ -0.76
VBA5YKR105C TY1B-ORQ92393 1755 aa10.3□□□□□ -0.76
VBA5YKR105C SPP41P38904 1435 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-HO13535 1793 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-DR5P0C2I2 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-DR6P0C2I3 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-LR2P0C2I5 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-LR3P0C2I6 1755 aaKnown RBP10.28□□□□□ -0.76
VBA5YKR105C TY1B-PR1P0C2I9 1755 aaKnown RBP10.28□□□□□ -0.76
VBA5YKR105C TY1B-PR2P0C2J0 1756 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-PR3P0C2J1 1755 aaKnown RBP10.28□□□□□ -0.76
VBA5YKR105C TY1B-JR1P47098 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-ML2Q03434 1755 aaKnown RBP10.28□□□□□ -0.76
VBA5YKR105C TY1B-ER1Q03612 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-ML1Q04711 1755 aaKnown RBP10.28□□□□□ -0.76
VBA5YKR105C TY1B-GR2Q12269 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-OLQ12273 1755 aa10.28□□□□□ -0.76
VBA5YKR105C TY1B-PLQ12414 1755 aaKnown RBP10.28□□□□□ -0.76
VBA5YKR105C ESC1Q03661 1658 aaKnown RBP10.27□□□□□ -0.76
VBA5YKR105C PAN1P32521 1480 aa10.27□□□□□ -0.77
VBA5YKR105C SNQ2P32568 1501 aaKnown RBP10.21□□□□□ -0.77
VBA5YKR105C VTH1P40438 1549 aa10.21□□□□□ -0.78
VBA5YKR105C VTH2P40890 1549 aa10.21□□□□□ -0.78
VBA5YKR105C STH1P32597 1359 aa10.21□□□□□ -0.78
VBA5YKR105C TAF7Q05021 590 aa10.2□□□□□ -0.78
VBA5YKR105C TRM732Q03496 1420 aa10.2□□□□□ -0.78
VBA5YKR105C TSC11P40061 1430 aa10.19□□□□□ -0.78
VBA5YKR105C MLP2P40457 1679 aa10.18□□□□□ -0.78
VBA5YKR105C DNF1P32660 1571 aa10.15□□□□□ -0.78
VBA5YKR105C RPA190P10964 1664 aaKnown RBP10.14□□□□□ -0.79
VBA5YKR105C PDR15Q04182 1529 aaKnown RBP10.13□□□□□ -0.79
VBA5YKR105C NTE1Q04958 1679 aa10.1□□□□□ -0.79
VBA5YKR105C TY1B-JR2P47100 1755 aaKnown RBP10.1□□□□□ -0.79
VBA5YKR105C TY1B-ER2Q03619 1755 aa10.1□□□□□ -0.79
VBA5YKR105C TY1B-MR1Q04214 1755 aa10.1□□□□□ -0.79
VBA5YKR105C TY1B-MR2Q04670 1755 aaKnown RBP10.1□□□□□ -0.79
VBA5YKR105C TY1B-LR1Q12088 1755 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms