RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeastyeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCK1YKR097W MTC1P47018 478 aaKnown RBP9.97□□□□□ -0.81
PCK1YKR097W DRS1P32892 752 aaKnown RBP9.51□□□□□ -0.89
PCK1YKR097W FAP1P53971 965 aa9.11□□□□□ -0.95
PCK1YKR097W PRY3P47033 881 aa8.56□□□□□ -1.04
PCK1YKR097W ISW2Q08773 1120 aa8.3□□□□□ -1.08
PCK1YKR097W PRI1P10363 409 aa8.3□□□□□ -1.08
PCK1YKR097W AAD16Q02895 342 aa8.27□□□□□ -1.08
PCK1YKR097W DIP2Q12220 943 aaPredicted RBP8.27□□□□□ -1.09
PCK1YKR097W RPG1P38249 964 aaKnown RBP8.14□□□□□ -1.11
PCK1YKR097W BFR2Q06631 534 aaKnown RBP8.01□□□□□ -1.13
PCK1YKR097W RSE1Q04693 1361 aaKnown RBP7.98□□□□□ -1.13
PCK1YKR097W AVT3P36062 692 aa7.97□□□□□ -1.13
PCK1YKR097W HAA1Q12753 694 aaKnown RBP7.95□□□□□ -1.14
PCK1YKR097W TSR3Q12094 313 aaKnown RBP7.86□□□□□ -1.15
PCK1YKR097W YCK3P39962 524 aa7.83□□□□□ -1.16
PCK1YKR097W RPL17AP05740 184 aaKnown RBP7.69□□□□□ -1.18
PCK1YKR097W REB1P21538 810 aa7.69□□□□□ -1.18
PCK1YKR097W RPL17BP46990 184 aaKnown RBP7.69□□□□□ -1.18
PCK1YKR097W MRPL32P25348 183 aa7.63□□□□□ -1.19
PCK1YKR097W TFA1P36100 482 aa7.63□□□□□ -1.19
PCK1YKR097W SPT21P35209 758 aa7.3□□□□□ -1.24
PCK1YKR097W YGL015CP33199 130 aa7.28□□□□□ -1.24
PCK1YKR097W YKR023WP36119 530 aaKnown RBP7.19□□□□□ -1.26
PCK1YKR097W CDC27P38042 758 aa7.16□□□□□ -1.26
PCK1YKR097W RIM101P33400 625 aa7.12□□□□□ -1.27
PCK1YKR097W TFC8Q12308 588 aa7.07□□□□□ -1.28
PCK1YKR097W HOP09932 586 aa7.06□□□□□ -1.28
PCK1YKR097W UBP10P53874 792 aaPredicted RBP7.03□□□□□ -1.28
PCK1YKR097W DCD1P06773 312 aa6.98□□□□□ -1.29
PCK1YKR097W BUD31P25337 157 aaPredicted RBP6.97□□□□□ -1.29
PCK1YKR097W MAP2P38174 421 aaKnown RBP6.94□□□□□ -1.3
PCK1YKR097W YIL055CP40523 627 aaKnown RBP6.88□□□□□ -1.31
PCK1YKR097W SCY1P53009 804 aa6.87□□□□□ -1.31
PCK1YKR097W OXP1P28273 1286 aa6.85□□□□□ -1.31
PCK1YKR097W BCH2P36122 765 aa6.84□□□□□ -1.32
PCK1YKR097W PTP3P40048 928 aa6.84□□□□□ -1.32
PCK1YKR097W SLX5P32828 619 aaKnown RBP6.81□□□□□ -1.32
PCK1YKR097W TIF4632P39936 914 aaKnown RBP6.79□□□□□ -1.32
PCK1YKR097W RSM7P47150 247 aa6.73□□□□□ -1.33
PCK1YKR097W YAH1Q12184 172 aaKnown RBP6.73□□□□□ -1.33
PCK1YKR097W TGL3P40308 642 aa6.71□□□□□ -1.33
PCK1YKR097W EPS1P40557 701 aa6.7□□□□□ -1.34
PCK1YKR097W BBC1P47068 1157 aa6.7□□□□□ -1.34
PCK1YKR097W BDF1P35817 686 aa6.65□□□□□ -1.34
PCK1YKR097W SIS1P25294 352 aaKnown RBP6.65□□□□□ -1.35
PCK1YKR097W AI2P03876 854 aa6.63□□□□□ -1.35
PCK1YKR097W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
PCK1YKR097W SSP1P38871 571 aa6.61□□□□□ -1.35
PCK1YKR097W YLR271WQ06152 274 aa6.58□□□□□ -1.36
PCK1YKR097W UBP9P39967 754 aa6.52□□□□□ -1.37
PCK1YKR097W RQC2Q12532 1038 aaKnown RBP6.51□□□□□ -1.37
PCK1YKR097W PSD2P53037 1138 aaKnown RBP6.47□□□□□ -1.37
PCK1YKR097W YOR238WQ08634 303 aa6.46□□□□□ -1.37
PCK1YKR097W NSR1P27476 414 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
PCK1YKR097W YAP5P40574 245 aa6.44□□□□□ -1.38
PCK1YKR097W MGA2P40578 1113 aa6.44□□□□□ -1.38
PCK1YKR097W MST1P07236 462 aa6.4□□□□□ -1.38
PCK1YKR097W MRM1P25270 412 aa6.4□□□□□ -1.38
PCK1YKR097W CST9Q06032 482 aa6.34□□□□□ -1.39
PCK1YKR097W GTT3P39996 337 aa6.33□□□□□ -1.4
PCK1YKR097W RTG3P38165 486 aa6.31□□□□□ -1.4
PCK1YKR097W DMA1P38823 416 aa6.31□□□□□ -1.4
PCK1YKR097W YMR1P47147 688 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
PCK1YKR097W YBL029C-AQ3E756 94 aa6.26□□□□□ -1.41
PCK1YKR097W WSC3Q12215 556 aa6.24□□□□□ -1.41
PCK1YKR097W PIB1Q06651 286 aa6.23□□□□□ -1.41
PCK1YKR097W VNX1P42839 908 aa6.23□□□□□ -1.41
PCK1YKR097W SPP1Q03012 353 aa6.23□□□□□ -1.41
PCK1YKR097W DBP1P24784 617 aaKnown RBP6.22□□□□□ -1.41
PCK1YKR097W VPS29P38759 282 aa6.22□□□□□ -1.41
PCK1YKR097W TIF11P38912 153 aaKnown RBP6.17□□□□□ -1.42
PCK1YKR097W YFR006WP43590 535 aa6.17□□□□□ -1.42
PCK1YKR097W RCR1P38212 213 aa6.16□□□□□ -1.42
PCK1YKR097W MSB4Q12317 492 aa6.16□□□□□ -1.42
PCK1YKR097W EAP1P36041 632 aaKnown RBP6.14□□□□□ -1.43
PCK1YKR097W STS1P38637 319 aa6.14□□□□□ -1.43
PCK1YKR097W VMA1P17255 1071 aaKnown RBP6.14□□□□□ -1.43
PCK1YKR097W ULI1P43604 169 aa6.11□□□□□ -1.43
PCK1YKR097W SET4P42948 560 aa6.1□□□□□ -1.43
PCK1YKR097W YOL036WQ08206 761 aa6.1□□□□□ -1.43
PCK1YKR097W SAM3Q08986 587 aa6.09□□□□□ -1.43
PCK1YKR097W ABP1P15891 592 aaKnown RBP6.07□□□□□ -1.44
PCK1YKR097W MAK11P20484 414 aaKnown RBP6.07□□□□□ -1.44
PCK1YKR097W RAM2P29703 316 aa6.06□□□□□ -1.44
PCK1YKR097W GYP5Q12344 894 aa6.05□□□□□ -1.44
PCK1YKR097W LDB19Q12502 818 aa6.05□□□□□ -1.44
PCK1YKR097W YJL171CP46992 396 aa6.04□□□□□ -1.44
PCK1YKR097W MIF2P35201 549 aa6.04□□□□□ -1.44
PCK1YKR097W IOC2Q12072 812 aa6.03□□□□□ -1.44
PCK1YKR097W TRP5P00931 707 aaKnown RBP6.02□□□□□ -1.45
PCK1YKR097W FKH1P40466 484 aa6.01□□□□□ -1.45
PCK1YKR097W HTA1P04911 132 aaKnown RBP6□□□□□ -1.45
PCK1YKR097W HTA2P04912 132 aa6□□□□□ -1.45
PCK1YKR097W GRE2Q12068 342 aaKnown RBP6□□□□□ -1.45
PCK1YKR097W RTG1P32607 177 aa5.99□□□□□ -1.45
PCK1YKR097W TFG1P41895 735 aaPredicted RBP5.99□□□□□ -1.45
PCK1YKR097W YNL035CP53962 389 aaKnown RBP5.99□□□□□ -1.45
PCK1YKR097W SAS10Q12136 610 aaPredicted RBP5.98□□□□□ -1.45
PCK1YKR097W AIR2Q12476 344 aaKnown RBP5.98□□□□□ -1.45
PCK1YKR097W COQ8P27697 501 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms