RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeastyeast

Gene PAM17, Length 594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAM17YKR065C MTC1P47018 478 aaKnown RBP23.76■■□□□ 1.39
PAM17YKR065C DRS1P32892 752 aaKnown RBP22.77■■□□□ 1.24
PAM17YKR065C FAP1P53971 965 aa20.64■□□□□ 0.89
PAM17YKR065C DIP2Q12220 943 aaPredicted RBP19.75■□□□□ 0.75
PAM17YKR065C PRI1P10363 409 aa19.67■□□□□ 0.74
PAM17YKR065C ISW2Q08773 1120 aa19.59■□□□□ 0.73
PAM17YKR065C AAD16Q02895 342 aa19.48■□□□□ 0.71
PAM17YKR065C PRY3P47033 881 aa19.35■□□□□ 0.69
PAM17YKR065C RPG1P38249 964 aaKnown RBP19.3■□□□□ 0.68
PAM17YKR065C BFR2Q06631 534 aaKnown RBP19.24■□□□□ 0.67
PAM17YKR065C AVT3P36062 692 aa19.21■□□□□ 0.67
PAM17YKR065C RSE1Q04693 1361 aaKnown RBP18.95■□□□□ 0.62
PAM17YKR065C TSR3Q12094 313 aaKnown RBP18.58■□□□□ 0.56
PAM17YKR065C HAA1Q12753 694 aaKnown RBP18.28■□□□□ 0.52
PAM17YKR065C RPL17AP05740 184 aaKnown RBP18.27■□□□□ 0.52
PAM17YKR065C RPL17BP46990 184 aaKnown RBP18.27■□□□□ 0.52
PAM17YKR065C YCK3P39962 524 aa18.24■□□□□ 0.51
PAM17YKR065C REB1P21538 810 aa18.16■□□□□ 0.5
PAM17YKR065C MRPL32P25348 183 aa17.92■□□□□ 0.46
PAM17YKR065C SPT21P35209 758 aa17.54■□□□□ 0.4
PAM17YKR065C TFA1P36100 482 aa17.4■□□□□ 0.38
PAM17YKR065C YKR023WP36119 530 aaKnown RBP17.18■□□□□ 0.34
PAM17YKR065C RIM101P33400 625 aa17.08■□□□□ 0.32
PAM17YKR065C CDC27P38042 758 aa17.06■□□□□ 0.32
PAM17YKR065C YGL015CP33199 130 aa17.03■□□□□ 0.32
PAM17YKR065C TFC8Q12308 588 aa16.86■□□□□ 0.29
PAM17YKR065C HOP09932 586 aa16.8■□□□□ 0.28
PAM17YKR065C DCD1P06773 312 aa16.67■□□□□ 0.26
PAM17YKR065C UBP10P53874 792 aaPredicted RBP16.61■□□□□ 0.25
PAM17YKR065C MAP2P38174 421 aaKnown RBP16.48■□□□□ 0.23
PAM17YKR065C OXP1P28273 1286 aa16.47■□□□□ 0.23
PAM17YKR065C BCH2P36122 765 aa16.31■□□□□ 0.2
PAM17YKR065C YIL055CP40523 627 aaKnown RBP16.3■□□□□ 0.2
PAM17YKR065C SCY1P53009 804 aa16.27■□□□□ 0.2
PAM17YKR065C PTP3P40048 928 aa16.24■□□□□ 0.19
PAM17YKR065C SLX5P32828 619 aaKnown RBP16.07■□□□□ 0.16
PAM17YKR065C YAH1Q12184 172 aaKnown RBP16.07■□□□□ 0.16
PAM17YKR065C RSM7P47150 247 aa16.05■□□□□ 0.16
PAM17YKR065C EPS1P40557 701 aa15.97■□□□□ 0.15
PAM17YKR065C TIF4632P39936 914 aaKnown RBP15.94■□□□□ 0.14
PAM17YKR065C BDF1P35817 686 aa15.88■□□□□ 0.13
PAM17YKR065C SSP1P38871 571 aa15.86■□□□□ 0.13
PAM17YKR065C BBC1P47068 1157 aa15.86■□□□□ 0.13
PAM17YKR065C YLR271WQ06152 274 aa15.86■□□□□ 0.13
PAM17YKR065C AI2P03876 854 aa15.84■□□□□ 0.13
PAM17YKR065C TGL3P40308 642 aa15.84■□□□□ 0.13
PAM17YKR065C ARP8Q12386 881 aaKnown RBP RIP-Chip data15.75■□□□□ 0.11not detected
PAM17YKR065C PSD2P53037 1138 aaKnown RBP15.59■□□□□ 0.09
PAM17YKR065C MGA2P40578 1113 aa15.43■□□□□ 0.06
PAM17YKR065C NSR1P27476 414 aaKnown RBP RIP-Chip data15.38■□□□□ 0.05not detected
PAM17YKR065C BUD31P25337 157 aaPredicted RBP15.31■□□□□ 0.04
PAM17YKR065C CST9Q06032 482 aa15.31■□□□□ 0.04
PAM17YKR065C MRM1P25270 412 aa15.28■□□□□ 0.04
PAM17YKR065C MST1P07236 462 aa15.24■□□□□ 0.03
PAM17YKR065C YAP5P40574 245 aa15.23■□□□□ 0.03
PAM17YKR065C YOR238WQ08634 303 aa15.23■□□□□ 0.03
PAM17YKR065C UBP9P39967 754 aa15.19■□□□□ 0.02
PAM17YKR065C RTG3P38165 486 aa15.05■□□□□ -0
PAM17YKR065C VPS29P38759 282 aa14.94□□□□□ -0.02
PAM17YKR065C YMR1P47147 688 aaKnown RBP RIP-Chip data14.93□□□□□ -0.02not detected
PAM17YKR065C RCR1P38212 213 aa14.86□□□□□ -0.03
PAM17YKR065C GTT3P39996 337 aa14.86□□□□□ -0.03
PAM17YKR065C PIB1Q06651 286 aa14.83□□□□□ -0.04
PAM17YKR065C YBL029C-AQ3E756 94 aa14.83□□□□□ -0.04
PAM17YKR065C DBP1P24784 617 aaKnown RBP14.81□□□□□ -0.04
PAM17YKR065C STS1P38637 319 aa14.75□□□□□ -0.05
PAM17YKR065C VNX1P42839 908 aa14.74□□□□□ -0.05
PAM17YKR065C YFR006WP43590 535 aa14.72□□□□□ -0.05
PAM17YKR065C WSC3Q12215 556 aa14.71□□□□□ -0.05
PAM17YKR065C SIS1P25294 352 aaKnown RBP14.63□□□□□ -0.07
PAM17YKR065C RAM2P29703 316 aa14.63□□□□□ -0.07
PAM17YKR065C VMA1P17255 1071 aaKnown RBP14.62□□□□□ -0.07
PAM17YKR065C SPP1Q03012 353 aa14.62□□□□□ -0.07
PAM17YKR065C MSB4Q12317 492 aa14.58□□□□□ -0.08
PAM17YKR065C MAK11P20484 414 aaKnown RBP14.57□□□□□ -0.08
PAM17YKR065C TIF11P38912 153 aaKnown RBP14.56□□□□□ -0.08
PAM17YKR065C SAM3Q08986 587 aa14.55□□□□□ -0.08
PAM17YKR065C YOL036WQ08206 761 aa14.51□□□□□ -0.09
PAM17YKR065C EAP1P36041 632 aaKnown RBP14.47□□□□□ -0.09
PAM17YKR065C SET4P42948 560 aa14.45□□□□□ -0.1
PAM17YKR065C ULI1P43604 169 aa14.43□□□□□ -0.1
PAM17YKR065C ABP1P15891 592 aaKnown RBP14.38□□□□□ -0.11
PAM17YKR065C MIF2P35201 549 aa14.37□□□□□ -0.11
PAM17YKR065C IOC2Q12072 812 aa14.36□□□□□ -0.11
PAM17YKR065C GYP5Q12344 894 aa14.35□□□□□ -0.11
PAM17YKR065C COQ8P27697 501 aa14.34□□□□□ -0.11
PAM17YKR065C LDB19Q12502 818 aa14.3□□□□□ -0.12
PAM17YKR065C TRP5P00931 707 aaKnown RBP14.29□□□□□ -0.12
PAM17YKR065C EDS1P38073 919 aa14.29□□□□□ -0.12
PAM17YKR065C PTC3P34221 468 aaKnown RBP14.26□□□□□ -0.13
PAM17YKR065C FKH1P40466 484 aa14.26□□□□□ -0.13
PAM17YKR065C GRE2Q12068 342 aaKnown RBP14.26□□□□□ -0.13
PAM17YKR065C NOP53Q12080 455 aaKnown RBP14.26□□□□□ -0.13
PAM17YKR065C HTA1P04911 132 aaKnown RBP14.22□□□□□ -0.13
PAM17YKR065C HTA2P04912 132 aa14.22□□□□□ -0.13
PAM17YKR065C DCW1P36091 449 aa14.19□□□□□ -0.14
PAM17YKR065C AIR2Q12476 344 aaKnown RBP14.19□□□□□ -0.14
PAM17YKR065C ATH1P48016 1211 aa14.18□□□□□ -0.14
PAM17YKR065C GUT1P32190 709 aa14.16□□□□□ -0.14
PAM17YKR065C YNL035CP53962 389 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms