RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeastyeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAP1YKR039W SGS1P35187 1447 aa17.87■□□□□ 0.45
GAP1YKR039W INO80P53115 1489 aa17.55■□□□□ 0.4
GAP1YKR039W TCB3Q03640 1545 aaKnown RBP17.38■□□□□ 0.37
GAP1YKR039W MON2P48563 1636 aaPredicted RBP17.24■□□□□ 0.35
GAP1YKR039W TY1B-DR4Q07793 1604 aa17.15■□□□□ 0.34
GAP1YKR039W SSN2P38931 1420 aa16.96■□□□□ 0.31
GAP1YKR039W SPA2P23201 1466 aaKnown RBP16.96■□□□□ 0.31
GAP1YKR039W SWR1Q05471 1514 aa16.85■□□□□ 0.29
GAP1YKR039W HSL1P34244 1518 aa16.8■□□□□ 0.28
GAP1YKR039W SPT6P23615 1451 aaKnown RBP16.78■□□□□ 0.28
GAP1YKR039W HIR3P47171 1648 aa16.51■□□□□ 0.23
GAP1YKR039W DRS1P32892 752 aaKnown RBP16.49■□□□□ 0.23
GAP1YKR039W DNA2P38859 1522 aa16.44■□□□□ 0.22
GAP1YKR039W XRN1P22147 1528 aaKnown RBP16.39■□□□□ 0.21
GAP1YKR039W KOG1P38873 1557 aa16.35■□□□□ 0.21
GAP1YKR039W REV3P14284 1504 aa16.13■□□□□ 0.17
GAP1YKR039W BUD4P47136 1447 aa16.01■□□□□ 0.15
GAP1YKR039W THO2P53552 1597 aaKnown RBP16.01■□□□□ 0.15
GAP1YKR039W SIN3P22579 1536 aa16■□□□□ 0.15
GAP1YKR039W ECM5Q03214 1411 aa16■□□□□ 0.15
GAP1YKR039W TAF2P23255 1407 aa15.95■□□□□ 0.14
GAP1YKR039W SSK2P53599 1579 aa15.9■□□□□ 0.14
GAP1YKR039W ATG2P53855 1592 aa15.78■□□□□ 0.12
GAP1YKR039W ESP1Q03018 1630 aa15.76■□□□□ 0.11
GAP1YKR039W SKI3P17883 1432 aaKnown RBP15.74■□□□□ 0.11
GAP1YKR039W MDS3P53094 1487 aa15.72■□□□□ 0.11
GAP1YKR039W MYO2P19524 1574 aaKnown RBP15.69■□□□□ 0.1
GAP1YKR039W PEP1P32319 1579 aa15.69■□□□□ 0.1
GAP1YKR039W YPK9Q12697 1472 aa15.57■□□□□ 0.08
GAP1YKR039W POL1P13382 1468 aa15.45■□□□□ 0.06
GAP1YKR039W SCC2Q04002 1493 aa15.44■□□□□ 0.06
GAP1YKR039W RPO31P04051 1460 aa15.38■□□□□ 0.05
GAP1YKR039W UFD4P33202 1483 aa15.37■□□□□ 0.05
GAP1YKR039W STU1P38198 1513 aa15.37■□□□□ 0.05
GAP1YKR039W RSE1Q04693 1361 aaKnown RBP15.3■□□□□ 0.04
GAP1YKR039W RKR1Q04781 1562 aa15.29■□□□□ 0.04
GAP1YKR039W TOP2P06786 1428 aaKnown RBP15.26■□□□□ 0.03
GAP1YKR039W YTA7P40340 1379 aa15.25■□□□□ 0.03
GAP1YKR039W YCF1P39109 1515 aaKnown RBP15.24■□□□□ 0.03
GAP1YKR039W BPT1P14772 1559 aa15.24■□□□□ 0.03
GAP1YKR039W YOR1P53049 1477 aa15.23■□□□□ 0.03
GAP1YKR039W CHD1P32657 1468 aa15.19■□□□□ 0.02
GAP1YKR039W SMC4Q12267 1418 aa15.16■□□□□ 0.02
GAP1YKR039W TY2B-LR1P0C2J3 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-FP0CX63 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-GR2P0CX64 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-CP25384 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-DR2Q03494 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY1B-DR1Q03855 1755 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-DR3Q07791 1770 aaKnown RBP15.15■□□□□ 0.02
GAP1YKR039W TY2B-OR1Q12113 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-DR1Q12472 1770 aa15.15■□□□□ 0.02
GAP1YKR039W TY2B-OR2Q12501 1770 aa15.15■□□□□ 0.02
GAP1YKR039W MMS22Q06164 1454 aa15.12■□□□□ 0.01
GAP1YKR039W MYO4P32492 1471 aa15.07■□□□□ 0
GAP1YKR039W TY1B-DR3Q99231 1755 aa15.05■□□□□ -0
GAP1YKR039W RQC2Q12532 1038 aaKnown RBP15.03■□□□□ -0
GAP1YKR039W MTC1P47018 478 aaKnown RBP15.01□□□□□ -0.01
GAP1YKR039W TY2B-BQ12491 1770 aa15□□□□□ -0.01
GAP1YKR039W SAS10Q12136 610 aaPredicted RBP15□□□□□ -0.01
GAP1YKR039W CDC25P04821 1589 aa14.95□□□□□ -0.02
GAP1YKR039W TY1B-BRQ12193 1756 aa14.94□□□□□ -0.02
GAP1YKR039W TY1B-GR3Q12316 1755 aa14.94□□□□□ -0.02
GAP1YKR039W TY1B-ORQ92393 1755 aa14.94□□□□□ -0.02
GAP1YKR039W SPP41P38904 1435 aa14.92□□□□□ -0.02
GAP1YKR039W TY1B-HO13535 1793 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-DR5P0C2I2 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-DR6P0C2I3 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-LR2P0C2I5 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-LR3P0C2I6 1755 aaKnown RBP14.91□□□□□ -0.02
GAP1YKR039W TY1B-PR1P0C2I9 1755 aaKnown RBP14.91□□□□□ -0.02
GAP1YKR039W TY1B-PR2P0C2J0 1756 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-PR3P0C2J1 1755 aaKnown RBP14.91□□□□□ -0.02
GAP1YKR039W TY1B-JR1P47098 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-ML2Q03434 1755 aaKnown RBP14.91□□□□□ -0.02
GAP1YKR039W TY1B-ER1Q03612 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-ML1Q04711 1755 aaKnown RBP14.91□□□□□ -0.02
GAP1YKR039W TY1B-GR2Q12269 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-OLQ12273 1755 aa14.91□□□□□ -0.02
GAP1YKR039W TY1B-PLQ12414 1755 aaKnown RBP14.91□□□□□ -0.02
GAP1YKR039W PAN1P32521 1480 aa14.89□□□□□ -0.03
GAP1YKR039W SNQ2P32568 1501 aaKnown RBP14.85□□□□□ -0.03
GAP1YKR039W TAF7Q05021 590 aa14.85□□□□□ -0.03
GAP1YKR039W STH1P32597 1359 aa14.85□□□□□ -0.03
GAP1YKR039W TSC11P40061 1430 aa14.82□□□□□ -0.04
GAP1YKR039W VTH1P40438 1549 aa14.78□□□□□ -0.04
GAP1YKR039W VTH2P40890 1549 aa14.78□□□□□ -0.04
GAP1YKR039W ESC1Q03661 1658 aaKnown RBP14.74□□□□□ -0.05
GAP1YKR039W DNF1P32660 1571 aa14.73□□□□□ -0.05
GAP1YKR039W TRM732Q03496 1420 aa14.73□□□□□ -0.05
GAP1YKR039W MLP2P40457 1679 aa14.69□□□□□ -0.06
GAP1YKR039W PDR15Q04182 1529 aaKnown RBP14.67□□□□□ -0.06
GAP1YKR039W TY1B-JR2P47100 1755 aaKnown RBP14.66□□□□□ -0.06
GAP1YKR039W TY1B-ER2Q03619 1755 aa14.66□□□□□ -0.06
GAP1YKR039W TY1B-MR1Q04214 1755 aa14.66□□□□□ -0.06
GAP1YKR039W TY1B-MR2Q04670 1755 aaKnown RBP14.66□□□□□ -0.06
GAP1YKR039W TY1B-LR1Q12088 1755 aaKnown RBP14.66□□□□□ -0.06
GAP1YKR039W TY1B-NL1Q12112 1755 aa14.66□□□□□ -0.06
GAP1YKR039W TY1B-GR1Q12141 1755 aa14.66□□□□□ -0.06
GAP1YKR039W TY1B-BLQ12490 1755 aa14.66□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms