RNA–Protein interactions for RNA: YJR059W

PTK2, Transcript of Putative serine/threonine protein kinase, yeastyeast

Gene PTK2, Length 2,457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTK2YJR059W DRS1P32892 752 aaKnown RBP10.94□□□□□ -0.66
PTK2YJR059W MTC1P47018 478 aaKnown RBP10.59□□□□□ -0.71
PTK2YJR059W BFR2Q06631 534 aaKnown RBP9.6□□□□□ -0.87
PTK2YJR059W DIP2Q12220 943 aaPredicted RBP9.21□□□□□ -0.94
PTK2YJR059W TFA1P36100 482 aa9.11□□□□□ -0.95
PTK2YJR059W AVT3P36062 692 aa9.05□□□□□ -0.96
PTK2YJR059W SPA2P23201 1466 aaKnown RBP8.89□□□□□ -0.99
PTK2YJR059W SGS1P35187 1447 aa8.76□□□□□ -1.01
PTK2YJR059W SSN2P38931 1420 aa8.71□□□□□ -1.02
PTK2YJR059W RSE1Q04693 1361 aaKnown RBP8.67□□□□□ -1.02
PTK2YJR059W ISW2Q08773 1120 aa8.66□□□□□ -1.02
PTK2YJR059W SKI3P17883 1432 aaKnown RBP8.56□□□□□ -1.04
PTK2YJR059W NOP2P40991 618 aaKnown RBP8.54□□□□□ -1.04
PTK2YJR059W FAP1P53971 965 aa8.53□□□□□ -1.04
PTK2YJR059W RPG1P38249 964 aaKnown RBP8.47□□□□□ -1.05
PTK2YJR059W INO80P53115 1489 aa8.38□□□□□ -1.07
PTK2YJR059W NSR1P27476 414 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
PTK2YJR059W PRI1P10363 409 aa8.34□□□□□ -1.08
PTK2YJR059W RPL17AP05740 184 aaKnown RBP8.31□□□□□ -1.08
PTK2YJR059W RPL17BP46990 184 aaKnown RBP8.31□□□□□ -1.08
PTK2YJR059W RQC2Q12532 1038 aaKnown RBP8.29□□□□□ -1.08
PTK2YJR059W REB1P21538 810 aa8.25□□□□□ -1.09
PTK2YJR059W AAD16Q02895 342 aa8.24□□□□□ -1.09
PTK2YJR059W CHD1P32657 1468 aa8.15□□□□□ -1.1
PTK2YJR059W MMS22Q06164 1454 aa8.14□□□□□ -1.11
PTK2YJR059W TAF7Q05021 590 aa8.06□□□□□ -1.12
PTK2YJR059W UFD4P33202 1483 aa8.02□□□□□ -1.12
PTK2YJR059W TCB3Q03640 1545 aaKnown RBP8.02□□□□□ -1.13
PTK2YJR059W XRN1P22147 1528 aaKnown RBP8.01□□□□□ -1.13
PTK2YJR059W CAB3P36076 571 aa8□□□□□ -1.13
PTK2YJR059W EBP2P36049 427 aaKnown RBP8□□□□□ -1.13
PTK2YJR059W TSR3Q12094 313 aaKnown RBP7.97□□□□□ -1.13
PTK2YJR059W ENP1P38333 483 aaKnown RBP7.96□□□□□ -1.14
PTK2YJR059W PRY3P47033 881 aa7.93□□□□□ -1.14
PTK2YJR059W TRM732Q03496 1420 aa7.89□□□□□ -1.15
PTK2YJR059W SPT21P35209 758 aa7.89□□□□□ -1.15
PTK2YJR059W SPP41P38904 1435 aa7.89□□□□□ -1.15
PTK2YJR059W TY1B-DR4Q07793 1604 aa7.88□□□□□ -1.15
PTK2YJR059W HSL1P34244 1518 aa7.88□□□□□ -1.15
PTK2YJR059W RIM101P33400 625 aa7.88□□□□□ -1.15
PTK2YJR059W MON2P48563 1636 aaPredicted RBP7.87□□□□□ -1.15
PTK2YJR059W PTP3P40048 928 aa7.85□□□□□ -1.15
PTK2YJR059W YPR148CQ06523 435 aa7.85□□□□□ -1.15
PTK2YJR059W IKI3Q06706 1349 aaKnown RBP7.84□□□□□ -1.15
PTK2YJR059W STH1P32597 1359 aa7.83□□□□□ -1.16
PTK2YJR059W SPT6P23615 1451 aaKnown RBP7.82□□□□□ -1.16
PTK2YJR059W THO2P53552 1597 aaKnown RBP7.81□□□□□ -1.16
PTK2YJR059W MYO2P19524 1574 aaKnown RBP7.79□□□□□ -1.16
PTK2YJR059W POL5P39985 1022 aaKnown RBP7.79□□□□□ -1.16
PTK2YJR059W STU1P38198 1513 aa7.79□□□□□ -1.16
PTK2YJR059W HIR3P47171 1648 aa7.78□□□□□ -1.16
PTK2YJR059W REV3P14284 1504 aa7.77□□□□□ -1.17
PTK2YJR059W MRPL32P25348 183 aa7.76□□□□□ -1.17
PTK2YJR059W SPT7P35177 1332 aa7.76□□□□□ -1.17
PTK2YJR059W SAS10Q12136 610 aaPredicted RBP7.75□□□□□ -1.17
PTK2YJR059W SIN3P22579 1536 aa7.75□□□□□ -1.17
PTK2YJR059W SSK2P53599 1579 aa7.74□□□□□ -1.17
PTK2YJR059W ECM5Q03214 1411 aa7.73□□□□□ -1.17
PTK2YJR059W SEC3P33332 1336 aaKnown RBP7.73□□□□□ -1.17
PTK2YJR059W NUP170P38181 1502 aa7.73□□□□□ -1.17
PTK2YJR059W YTA7P40340 1379 aa7.72□□□□□ -1.17
PTK2YJR059W SSM4P40318 1319 aa7.71□□□□□ -1.17
PTK2YJR059W SSP1P38871 571 aa7.71□□□□□ -1.17
PTK2YJR059W PRS1P32895 427 aaKnown RBP7.7□□□□□ -1.18
PTK2YJR059W YIL055CP40523 627 aaKnown RBP7.7□□□□□ -1.18
PTK2YJR059W POL1P13382 1468 aa7.69□□□□□ -1.18
PTK2YJR059W BPT1P14772 1559 aa7.69□□□□□ -1.18
PTK2YJR059W TAF2P23255 1407 aa7.67□□□□□ -1.18
PTK2YJR059W SCC2Q04002 1493 aa7.67□□□□□ -1.18
PTK2YJR059W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.67□□□□□ -1.18not detected
PTK2YJR059W YAH1Q12184 172 aaKnown RBP7.66□□□□□ -1.18
PTK2YJR059W ESP1Q03018 1630 aa7.65□□□□□ -1.18
PTK2YJR059W PDR10P51533 1564 aa7.63□□□□□ -1.19
PTK2YJR059W SIS2P36024 562 aa7.62□□□□□ -1.19
PTK2YJR059W DMA1P38823 416 aa7.62□□□□□ -1.19
PTK2YJR059W MLP2P40457 1679 aa7.62□□□□□ -1.19
PTK2YJR059W OXP1P28273 1286 aa7.6□□□□□ -1.19
PTK2YJR059W RTT106P40161 455 aa7.6□□□□□ -1.19
PTK2YJR059W PEP1P32319 1579 aa7.59□□□□□ -1.19
PTK2YJR059W YKR023WP36119 530 aaKnown RBP7.58□□□□□ -1.2
PTK2YJR059W BUD4P47136 1447 aa7.57□□□□□ -1.2
PTK2YJR059W MYO4P32492 1471 aa7.57□□□□□ -1.2
PTK2YJR059W CLC1P17891 233 aa7.57□□□□□ -1.2
PTK2YJR059W IME2P32581 645 aa7.56□□□□□ -1.2
PTK2YJR059W PAN1P32521 1480 aa7.55□□□□□ -1.2
PTK2YJR059W TCB2P48231 1178 aa7.55□□□□□ -1.2
PTK2YJR059W SRB8P25648 1427 aa7.54□□□□□ -1.2
PTK2YJR059W DNA2P38859 1522 aa7.54□□□□□ -1.2
PTK2YJR059W SMC4Q12267 1418 aa7.54□□□□□ -1.2
PTK2YJR059W CFT1Q06632 1357 aaKnown RBP7.52□□□□□ -1.21
PTK2YJR059W YOR1P53049 1477 aa7.52□□□□□ -1.21
PTK2YJR059W HAA1Q12753 694 aaKnown RBP7.52□□□□□ -1.21
PTK2YJR059W SNQ2P32568 1501 aaKnown RBP7.51□□□□□ -1.21
PTK2YJR059W YLR419WQ06698 1435 aaKnown RBP7.51□□□□□ -1.21
PTK2YJR059W LEU3P08638 886 aa7.5□□□□□ -1.21
PTK2YJR059W RKR1Q04781 1562 aa7.5□□□□□ -1.21
PTK2YJR059W HOP09932 586 aa7.49□□□□□ -1.21
PTK2YJR059W RSM7P47150 247 aa7.49□□□□□ -1.21
PTK2YJR059W SWR1Q05471 1514 aa7.49□□□□□ -1.21
PTK2YJR059W YCF1P39109 1515 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms