RNA–Protein interactions for RNA: YJR045C

SSC1, Transcript of Hsp70 family ATPase, yeastyeast

Gene SSC1, Length 1,965 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSC1YJR045C MON2P48563 1636 aaPredicted RBP13.91□□□□□ -0.18
SSC1YJR045C INO80P53115 1489 aa13.81□□□□□ -0.2
SSC1YJR045C TCB3Q03640 1545 aaKnown RBP13.32□□□□□ -0.28
SSC1YJR045C SWR1Q05471 1514 aa13.31□□□□□ -0.28
SSC1YJR045C TY1B-DR4Q07793 1604 aa13.31□□□□□ -0.28
SSC1YJR045C DNA2P38859 1522 aa13.21□□□□□ -0.3
SSC1YJR045C SGS1P35187 1447 aa13.2□□□□□ -0.3
SSC1YJR045C KOG1P38873 1557 aa13.06□□□□□ -0.32
SSC1YJR045C HSL1P34244 1518 aa12.87□□□□□ -0.35
SSC1YJR045C SPT6P23615 1451 aaKnown RBP12.83□□□□□ -0.36
SSC1YJR045C SPA2P23201 1466 aaKnown RBP12.71□□□□□ -0.37
SSC1YJR045C HIR3P47171 1648 aa12.6□□□□□ -0.39
SSC1YJR045C RSE1Q04693 1361 aaKnown RBP12.56□□□□□ -0.4
SSC1YJR045C THO2P53552 1597 aaKnown RBP12.44□□□□□ -0.42
SSC1YJR045C ECM5Q03214 1411 aa12.43□□□□□ -0.42
SSC1YJR045C BUD4P47136 1447 aa12.4□□□□□ -0.43
SSC1YJR045C XRN1P22147 1528 aaKnown RBP12.37□□□□□ -0.43
SSC1YJR045C MDS3P53094 1487 aa12.29□□□□□ -0.44
SSC1YJR045C SSN2P38931 1420 aa12.27□□□□□ -0.44
SSC1YJR045C REV3P14284 1504 aa12.18□□□□□ -0.46
SSC1YJR045C PEP1P32319 1579 aa12.18□□□□□ -0.46
SSC1YJR045C ATG2P53855 1592 aa12.17□□□□□ -0.46
SSC1YJR045C SIN3P22579 1536 aa12.05□□□□□ -0.48
SSC1YJR045C MTC1P47018 478 aaKnown RBP12.01□□□□□ -0.49
SSC1YJR045C TAF2P23255 1407 aa11.99□□□□□ -0.49
SSC1YJR045C SSK2P53599 1579 aa11.96□□□□□ -0.49
SSC1YJR045C BPT1P14772 1559 aa11.94□□□□□ -0.5
SSC1YJR045C SKI3P17883 1432 aaKnown RBP11.93□□□□□ -0.5
SSC1YJR045C ESP1Q03018 1630 aa11.91□□□□□ -0.5
SSC1YJR045C DRS1P32892 752 aaKnown RBP11.81□□□□□ -0.52
SSC1YJR045C MYO2P19524 1574 aaKnown RBP11.76□□□□□ -0.53
SSC1YJR045C YCF1P39109 1515 aaKnown RBP11.75□□□□□ -0.53
SSC1YJR045C UFD4P33202 1483 aa11.71□□□□□ -0.53
SSC1YJR045C YPK9Q12697 1472 aa11.71□□□□□ -0.53
SSC1YJR045C SCC2Q04002 1493 aa11.7□□□□□ -0.54
SSC1YJR045C RPO31P04051 1460 aa11.61□□□□□ -0.55
SSC1YJR045C TY2B-LR1P0C2J3 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-FP0CX63 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-GR2P0CX64 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-CP25384 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-DR2Q03494 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY1B-DR1Q03855 1755 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-DR3Q07791 1770 aaKnown RBP11.59□□□□□ -0.55
SSC1YJR045C TY2B-OR1Q12113 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-DR1Q12472 1770 aa11.59□□□□□ -0.55
SSC1YJR045C TY2B-OR2Q12501 1770 aa11.59□□□□□ -0.55
SSC1YJR045C CDC25P04821 1589 aa11.55□□□□□ -0.56
SSC1YJR045C ESC1Q03661 1658 aaKnown RBP11.52□□□□□ -0.56
SSC1YJR045C TY1B-BRQ12193 1756 aa11.52□□□□□ -0.56
SSC1YJR045C TY1B-GR3Q12316 1755 aa11.52□□□□□ -0.56
SSC1YJR045C TY1B-ORQ92393 1755 aa11.52□□□□□ -0.56
SSC1YJR045C CHD1P32657 1468 aa11.5□□□□□ -0.57
SSC1YJR045C TY2B-BQ12491 1770 aa11.46□□□□□ -0.58
SSC1YJR045C DNF1P32660 1571 aa11.45□□□□□ -0.58
SSC1YJR045C RKR1Q04781 1562 aa11.45□□□□□ -0.58
SSC1YJR045C TY1B-DR3Q99231 1755 aa11.44□□□□□ -0.58
SSC1YJR045C TY1B-HO13535 1793 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-DR5P0C2I2 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-DR6P0C2I3 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-LR2P0C2I5 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-LR3P0C2I6 1755 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C TY1B-PR1P0C2I9 1755 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C TY1B-PR2P0C2J0 1756 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-PR3P0C2J1 1755 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C TY1B-JR1P47098 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-ML2Q03434 1755 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C TY1B-ER1Q03612 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-ML1Q04711 1755 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C TY1B-GR2Q12269 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-OLQ12273 1755 aa11.43□□□□□ -0.58
SSC1YJR045C TY1B-PLQ12414 1755 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C TOP2P06786 1428 aaKnown RBP11.43□□□□□ -0.58
SSC1YJR045C RQC2Q12532 1038 aaKnown RBP11.4□□□□□ -0.58
SSC1YJR045C PAN1P32521 1480 aa11.4□□□□□ -0.58
SSC1YJR045C POL1P13382 1468 aa11.39□□□□□ -0.59
SSC1YJR045C RPA190P10964 1664 aaKnown RBP11.38□□□□□ -0.59
SSC1YJR045C MET5P47169 1442 aa11.35□□□□□ -0.59
SSC1YJR045C MMS22Q06164 1454 aa11.32□□□□□ -0.6
SSC1YJR045C STU1P38198 1513 aa11.31□□□□□ -0.6
SSC1YJR045C YOR1P53049 1477 aa11.3□□□□□ -0.6
SSC1YJR045C SMC4Q12267 1418 aa11.28□□□□□ -0.6
SSC1YJR045C TRM732Q03496 1420 aa11.22□□□□□ -0.61
SSC1YJR045C LTE1P07866 1435 aa11.21□□□□□ -0.61
SSC1YJR045C SPP41P38904 1435 aa11.2□□□□□ -0.62
SSC1YJR045C TY1B-JR2P47100 1755 aaKnown RBP11.2□□□□□ -0.62
SSC1YJR045C TY1B-ER2Q03619 1755 aa11.2□□□□□ -0.62
SSC1YJR045C TY1B-MR1Q04214 1755 aa11.2□□□□□ -0.62
SSC1YJR045C TY1B-MR2Q04670 1755 aaKnown RBP11.2□□□□□ -0.62
SSC1YJR045C TY1B-LR1Q12088 1755 aaKnown RBP11.2□□□□□ -0.62
SSC1YJR045C TY1B-NL1Q12112 1755 aa11.2□□□□□ -0.62
SSC1YJR045C TY1B-GR1Q12141 1755 aa11.2□□□□□ -0.62
SSC1YJR045C TY1B-BLQ12490 1755 aa11.2□□□□□ -0.62
SSC1YJR045C NTE1Q04958 1679 aa11.18□□□□□ -0.62
SSC1YJR045C YRF1-1P0CX20 1796 aa11.16□□□□□ -0.62
SSC1YJR045C YRF1-5P0CX21 1796 aa11.16□□□□□ -0.62
SSC1YJR045C YRF1-8P0CX22 1796 aa11.16□□□□□ -0.62
SSC1YJR045C VTH1P40438 1549 aa11.15□□□□□ -0.63
SSC1YJR045C VTH2P40890 1549 aa11.15□□□□□ -0.63
SSC1YJR045C NUP159P40477 1460 aa11.13□□□□□ -0.63
SSC1YJR045C GEA2P39993 1459 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms