RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM1, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM1YJL124C MTC1P47018 478 aaKnown RBP8.85□□□□□ -0.99
LSM1YJL124C DRS1P32892 752 aaKnown RBP8.36□□□□□ -1.07
LSM1YJL124C FAP1P53971 965 aa7.83□□□□□ -1.16
LSM1YJL124C PRI1P10363 409 aa7.42□□□□□ -1.22
LSM1YJL124C PRY3P47033 881 aa7.37□□□□□ -1.23
LSM1YJL124C AAD16Q02895 342 aa7.35□□□□□ -1.23
LSM1YJL124C DIP2Q12220 943 aaPredicted RBP7.31□□□□□ -1.24
LSM1YJL124C ISW2Q08773 1120 aa7.29□□□□□ -1.24
LSM1YJL124C RPG1P38249 964 aaKnown RBP7.24□□□□□ -1.25
LSM1YJL124C AVT3P36062 692 aa7.08□□□□□ -1.28
LSM1YJL124C YCK3P39962 524 aa7.02□□□□□ -1.29
LSM1YJL124C TSR3Q12094 313 aaKnown RBP7.02□□□□□ -1.29
LSM1YJL124C RSE1Q04693 1361 aaKnown RBP7.02□□□□□ -1.29
LSM1YJL124C BFR2Q06631 534 aaKnown RBP6.99□□□□□ -1.29
LSM1YJL124C HAA1Q12753 694 aaKnown RBP6.92□□□□□ -1.3
LSM1YJL124C RPL17AP05740 184 aaKnown RBP6.8□□□□□ -1.32
LSM1YJL124C RPL17BP46990 184 aaKnown RBP6.8□□□□□ -1.32
LSM1YJL124C REB1P21538 810 aa6.73□□□□□ -1.33
LSM1YJL124C MRPL32P25348 183 aa6.72□□□□□ -1.33
LSM1YJL124C SPT21P35209 758 aa6.53□□□□□ -1.36
LSM1YJL124C YKR023WP36119 530 aaKnown RBP6.44□□□□□ -1.38
LSM1YJL124C CDC27P38042 758 aa6.44□□□□□ -1.38
LSM1YJL124C YGL015CP33199 130 aa6.41□□□□□ -1.38
LSM1YJL124C TFA1P36100 482 aa6.34□□□□□ -1.39
LSM1YJL124C RIM101P33400 625 aa6.32□□□□□ -1.4
LSM1YJL124C HOP09932 586 aa6.31□□□□□ -1.4
LSM1YJL124C TFC8Q12308 588 aa6.3□□□□□ -1.4
LSM1YJL124C DCD1P06773 312 aa6.28□□□□□ -1.4
LSM1YJL124C RQC2Q12532 1038 aaKnown RBP6.26□□□□□ -1.41
LSM1YJL124C MAP2P38174 421 aaKnown RBP6.21□□□□□ -1.42
LSM1YJL124C UBP10P53874 792 aaPredicted RBP6.2□□□□□ -1.42
LSM1YJL124C OXP1P28273 1286 aa6.13□□□□□ -1.43
LSM1YJL124C BCH2P36122 765 aa6.11□□□□□ -1.43
LSM1YJL124C SCY1P53009 804 aa6.1□□□□□ -1.43
LSM1YJL124C TAF7Q05021 590 aa6.09□□□□□ -1.43
LSM1YJL124C SLX5P32828 619 aaKnown RBP6□□□□□ -1.45
LSM1YJL124C PTP3P40048 928 aa5.99□□□□□ -1.45
LSM1YJL124C YIL055CP40523 627 aaKnown RBP5.99□□□□□ -1.45
LSM1YJL124C EPS1P40557 701 aa5.95□□□□□ -1.46
LSM1YJL124C YAH1Q12184 172 aaKnown RBP5.94□□□□□ -1.46
LSM1YJL124C TIF4632P39936 914 aaKnown RBP5.93□□□□□ -1.46
LSM1YJL124C TGL3P40308 642 aa5.93□□□□□ -1.46
LSM1YJL124C BDF1P35817 686 aa5.92□□□□□ -1.46
LSM1YJL124C RSM7P47150 247 aa5.92□□□□□ -1.46
LSM1YJL124C BUD31P25337 157 aaPredicted RBP5.89□□□□□ -1.47
LSM1YJL124C AI2P03876 854 aa5.86□□□□□ -1.47
LSM1YJL124C YLR271WQ06152 274 aa5.85□□□□□ -1.47
LSM1YJL124C BBC1P47068 1157 aa5.83□□□□□ -1.48
LSM1YJL124C SSP1P38871 571 aa5.78□□□□□ -1.48
LSM1YJL124C PSD2P53037 1138 aaKnown RBP5.76□□□□□ -1.49
LSM1YJL124C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
LSM1YJL124C MST1P07236 462 aa5.71□□□□□ -1.5
LSM1YJL124C NSR1P27476 414 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
LSM1YJL124C UBP9P39967 754 aa5.69□□□□□ -1.5
LSM1YJL124C YOR238WQ08634 303 aa5.68□□□□□ -1.5
LSM1YJL124C MRM1P25270 412 aa5.66□□□□□ -1.5
LSM1YJL124C YAP5P40574 245 aa5.65□□□□□ -1.5
LSM1YJL124C CST9Q06032 482 aa5.65□□□□□ -1.5
LSM1YJL124C MGA2P40578 1113 aa5.64□□□□□ -1.51
LSM1YJL124C YBL029C-AQ3E756 94 aa5.59□□□□□ -1.51
LSM1YJL124C SIS1P25294 352 aaKnown RBP5.56□□□□□ -1.52
LSM1YJL124C VPS29P38759 282 aa5.55□□□□□ -1.52
LSM1YJL124C PIB1Q06651 286 aa5.55□□□□□ -1.52
LSM1YJL124C DMA1P38823 416 aa5.54□□□□□ -1.52
LSM1YJL124C VNX1P42839 908 aa5.54□□□□□ -1.52
LSM1YJL124C RTG3P38165 486 aa5.53□□□□□ -1.52
LSM1YJL124C WSC3Q12215 556 aa5.53□□□□□ -1.52
LSM1YJL124C RCR1P38212 213 aa5.52□□□□□ -1.53
LSM1YJL124C LEO1P38439 464 aa5.52□□□□□ -1.53
LSM1YJL124C YMR1P47147 688 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
LSM1YJL124C GTT3P39996 337 aa5.5□□□□□ -1.53
LSM1YJL124C DBP1P24784 617 aaKnown RBP5.49□□□□□ -1.53
LSM1YJL124C STS1P38637 319 aa5.48□□□□□ -1.53
LSM1YJL124C YFR006WP43590 535 aa5.48□□□□□ -1.53
LSM1YJL124C SPP1Q03012 353 aa5.48□□□□□ -1.53
LSM1YJL124C TIF11P38912 153 aaKnown RBP5.44□□□□□ -1.54
LSM1YJL124C VMA1P17255 1071 aaKnown RBP5.42□□□□□ -1.54
LSM1YJL124C ULI1P43604 169 aa5.39□□□□□ -1.55
LSM1YJL124C YOL036WQ08206 761 aa5.39□□□□□ -1.55
LSM1YJL124C SAM3Q08986 587 aa5.39□□□□□ -1.55
LSM1YJL124C RAM2P29703 316 aa5.38□□□□□ -1.55
LSM1YJL124C SET4P42948 560 aa5.38□□□□□ -1.55
LSM1YJL124C IOC2Q12072 812 aa5.38□□□□□ -1.55
LSM1YJL124C MSB4Q12317 492 aa5.38□□□□□ -1.55
LSM1YJL124C FKH1P40466 484 aa5.35□□□□□ -1.55
LSM1YJL124C AIR2Q12476 344 aaKnown RBP5.35□□□□□ -1.55
LSM1YJL124C LDB19Q12502 818 aa5.35□□□□□ -1.55
LSM1YJL124C EAP1P36041 632 aaKnown RBP5.34□□□□□ -1.55
LSM1YJL124C TRP5P00931 707 aaKnown RBP5.33□□□□□ -1.56
LSM1YJL124C MAK11P20484 414 aaKnown RBP5.32□□□□□ -1.56
LSM1YJL124C GYP5Q12344 894 aa5.31□□□□□ -1.56
LSM1YJL124C EDS1P38073 919 aa5.29□□□□□ -1.56
LSM1YJL124C RTG1P32607 177 aa5.28□□□□□ -1.56
LSM1YJL124C MIF2P35201 549 aa5.28□□□□□ -1.56
LSM1YJL124C COQ8P27697 501 aa5.26□□□□□ -1.57
LSM1YJL124C DCW1P36091 449 aa5.26□□□□□ -1.57
LSM1YJL124C YJL171CP46992 396 aa5.26□□□□□ -1.57
LSM1YJL124C YNL035CP53962 389 aaKnown RBP5.26□□□□□ -1.57
LSM1YJL124C ABP1P15891 592 aaKnown RBP5.25□□□□□ -1.57
LSM1YJL124C PTC3P34221 468 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms