RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C INO80P53115 1489 aa18.14■□□□□ 0.5
MET28YIR017C SGS1P35187 1447 aa18.12■□□□□ 0.49
MET28YIR017C MON2P48563 1636 aaPredicted RBP18.08■□□□□ 0.48
MET28YIR017C TCB3Q03640 1545 aaKnown RBP17.88■□□□□ 0.45
MET28YIR017C TY1B-DR4Q07793 1604 aa17.62■□□□□ 0.41
MET28YIR017C SWR1Q05471 1514 aa17.52■□□□□ 0.39
MET28YIR017C DNA2P38859 1522 aa17.25■□□□□ 0.35
MET28YIR017C SPT6P23615 1451 aaKnown RBP17.22■□□□□ 0.35
MET28YIR017C HSL1P34244 1518 aa17.21■□□□□ 0.35
MET28YIR017C SPA2P23201 1466 aaKnown RBP17.15■□□□□ 0.34
MET28YIR017C KOG1P38873 1557 aa17.13■□□□□ 0.33
MET28YIR017C SSN2P38931 1420 aa17■□□□□ 0.31
MET28YIR017C HIR3P47171 1648 aa16.88■□□□□ 0.29
MET28YIR017C XRN1P22147 1528 aaKnown RBP16.72■□□□□ 0.27
MET28YIR017C DRS1P32892 752 aaKnown RBP16.58■□□□□ 0.24
MET28YIR017C ECM5Q03214 1411 aa16.58■□□□□ 0.24
MET28YIR017C BUD4P47136 1447 aa16.55■□□□□ 0.24
MET28YIR017C THO2P53552 1597 aaKnown RBP16.52■□□□□ 0.24
MET28YIR017C REV3P14284 1504 aa16.44■□□□□ 0.22
MET28YIR017C RSE1Q04693 1361 aaKnown RBP16.33■□□□□ 0.2
MET28YIR017C TAF2P23255 1407 aa16.28■□□□□ 0.2
MET28YIR017C SIN3P22579 1536 aa16.27■□□□□ 0.2
MET28YIR017C MDS3P53094 1487 aa16.27■□□□□ 0.19
MET28YIR017C ATG2P53855 1592 aa16.19■□□□□ 0.18
MET28YIR017C PEP1P32319 1579 aa16.16■□□□□ 0.18
MET28YIR017C SSK2P53599 1579 aa16.14■□□□□ 0.17
MET28YIR017C SKI3P17883 1432 aaKnown RBP16.14■□□□□ 0.17
MET28YIR017C ESP1Q03018 1630 aa16.03■□□□□ 0.16
MET28YIR017C MYO2P19524 1574 aaKnown RBP15.94■□□□□ 0.14
MET28YIR017C MTC1P47018 478 aaKnown RBP15.88■□□□□ 0.13
MET28YIR017C YPK9Q12697 1472 aa15.87■□□□□ 0.13
MET28YIR017C BPT1P14772 1559 aa15.82■□□□□ 0.12
MET28YIR017C UFD4P33202 1483 aa15.77■□□□□ 0.11
MET28YIR017C SCC2Q04002 1493 aa15.77■□□□□ 0.11
MET28YIR017C RPO31P04051 1460 aa15.7■□□□□ 0.1
MET28YIR017C POL1P13382 1468 aa15.6■□□□□ 0.09
MET28YIR017C YCF1P39109 1515 aaKnown RBP15.56■□□□□ 0.08
MET28YIR017C TOP2P06786 1428 aaKnown RBP15.55■□□□□ 0.08
MET28YIR017C RKR1Q04781 1562 aa15.52■□□□□ 0.07
MET28YIR017C STU1P38198 1513 aa15.51■□□□□ 0.07
MET28YIR017C RQC2Q12532 1038 aaKnown RBP15.5■□□□□ 0.07
MET28YIR017C YOR1P53049 1477 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-LR1P0C2J3 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-FP0CX63 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-GR2P0CX64 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-CP25384 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-DR2Q03494 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY1B-DR1Q03855 1755 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-DR3Q07791 1770 aaKnown RBP15.43■□□□□ 0.06
MET28YIR017C TY2B-OR1Q12113 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-DR1Q12472 1770 aa15.43■□□□□ 0.06
MET28YIR017C TY2B-OR2Q12501 1770 aa15.43■□□□□ 0.06
MET28YIR017C CHD1P32657 1468 aa15.42■□□□□ 0.06
MET28YIR017C SMC4Q12267 1418 aa15.41■□□□□ 0.06
MET28YIR017C CDC25P04821 1589 aa15.38■□□□□ 0.05
MET28YIR017C YTA7P40340 1379 aa15.36■□□□□ 0.05
MET28YIR017C PAN1P32521 1480 aa15.32■□□□□ 0.04
MET28YIR017C MMS22Q06164 1454 aa15.31■□□□□ 0.04
MET28YIR017C TY1B-BRQ12193 1756 aa15.28■□□□□ 0.04
MET28YIR017C TY1B-GR3Q12316 1755 aa15.28■□□□□ 0.04
MET28YIR017C TY1B-ORQ92393 1755 aa15.28■□□□□ 0.04
MET28YIR017C TY1B-DR3Q99231 1755 aa15.28■□□□□ 0.04
MET28YIR017C TY2B-BQ12491 1770 aa15.27■□□□□ 0.04
MET28YIR017C SPP41P38904 1435 aa15.23■□□□□ 0.03
MET28YIR017C MYO4P32492 1471 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-HO13535 1793 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-DR5P0C2I2 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-DR6P0C2I3 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-LR2P0C2I5 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-LR3P0C2I6 1755 aaKnown RBP15.2■□□□□ 0.02
MET28YIR017C TY1B-PR1P0C2I9 1755 aaKnown RBP15.2■□□□□ 0.02
MET28YIR017C TY1B-PR2P0C2J0 1756 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-PR3P0C2J1 1755 aaKnown RBP15.2■□□□□ 0.02
MET28YIR017C TY1B-JR1P47098 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-ML2Q03434 1755 aaKnown RBP15.2■□□□□ 0.02
MET28YIR017C TY1B-ER1Q03612 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-ML1Q04711 1755 aaKnown RBP15.2■□□□□ 0.02
MET28YIR017C TY1B-GR2Q12269 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-OLQ12273 1755 aa15.2■□□□□ 0.02
MET28YIR017C TY1B-PLQ12414 1755 aaKnown RBP15.2■□□□□ 0.02
MET28YIR017C ESC1Q03661 1658 aaKnown RBP15.19■□□□□ 0.02
MET28YIR017C DNF1P32660 1571 aa15.19■□□□□ 0.02
MET28YIR017C TRM732Q03496 1420 aa15.16■□□□□ 0.02
MET28YIR017C TSC11P40061 1430 aa15.11■□□□□ 0.01
MET28YIR017C MET5P47169 1442 aa15.1■□□□□ 0.01
MET28YIR017C RPA190P10964 1664 aaKnown RBP15.07■□□□□ 0
MET28YIR017C VTH1P40438 1549 aa15.07■□□□□ 0
MET28YIR017C VTH2P40890 1549 aa15.07■□□□□ 0
MET28YIR017C SAS10Q12136 610 aaPredicted RBP15.05■□□□□ -0
MET28YIR017C STH1P32597 1359 aa15.03■□□□□ -0
MET28YIR017C TAF7Q05021 590 aa14.98□□□□□ -0.01
MET28YIR017C SNQ2P32568 1501 aaKnown RBP14.96□□□□□ -0.02
MET28YIR017C NUP159P40477 1460 aa14.95□□□□□ -0.02
MET28YIR017C TY1B-JR2P47100 1755 aaKnown RBP14.93□□□□□ -0.02
MET28YIR017C TY1B-ER2Q03619 1755 aa14.93□□□□□ -0.02
MET28YIR017C TY1B-MR1Q04214 1755 aa14.93□□□□□ -0.02
MET28YIR017C TY1B-MR2Q04670 1755 aaKnown RBP14.93□□□□□ -0.02
MET28YIR017C TY1B-LR1Q12088 1755 aaKnown RBP14.93□□□□□ -0.02
MET28YIR017C TY1B-NL1Q12112 1755 aa14.93□□□□□ -0.02
MET28YIR017C TY1B-GR1Q12141 1755 aa14.93□□□□□ -0.02
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms