RNA–Protein interactions for RNA: YIL170W

HXT12, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene HXT12, Length 1,374 nt, Biotype pseudogene, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HXT12YIL170W INO80P53115 1489 aa17.83■□□□□ 0.45
HXT12YIL170W MON2P48563 1636 aaPredicted RBP17.81■□□□□ 0.44
HXT12YIL170W SGS1P35187 1447 aa17.39■□□□□ 0.37
HXT12YIL170W TCB3Q03640 1545 aaKnown RBP17.31■□□□□ 0.36
HXT12YIL170W TY1B-DR4Q07793 1604 aa17.21■□□□□ 0.35
HXT12YIL170W SWR1Q05471 1514 aa17.18■□□□□ 0.34
HXT12YIL170W DNA2P38859 1522 aa17■□□□□ 0.31
HXT12YIL170W KOG1P38873 1557 aa16.81■□□□□ 0.28
HXT12YIL170W HSL1P34244 1518 aa16.75■□□□□ 0.27
HXT12YIL170W SPT6P23615 1451 aaKnown RBP16.73■□□□□ 0.27
HXT12YIL170W SPA2P23201 1466 aaKnown RBP16.64■□□□□ 0.25
HXT12YIL170W HIR3P47171 1648 aa16.41■□□□□ 0.22
HXT12YIL170W SSN2P38931 1420 aa16.24■□□□□ 0.19
HXT12YIL170W XRN1P22147 1528 aaKnown RBP16.21■□□□□ 0.19
HXT12YIL170W RSE1Q04693 1361 aaKnown RBP16.17■□□□□ 0.18
HXT12YIL170W ECM5Q03214 1411 aa16.17■□□□□ 0.18
HXT12YIL170W BUD4P47136 1447 aa16.1■□□□□ 0.17
HXT12YIL170W THO2P53552 1597 aaKnown RBP16.09■□□□□ 0.17
HXT12YIL170W REV3P14284 1504 aa15.92■□□□□ 0.14
HXT12YIL170W MDS3P53094 1487 aa15.91■□□□□ 0.14
HXT12YIL170W TAF2P23255 1407 aa15.82■□□□□ 0.12
HXT12YIL170W ATG2P53855 1592 aa15.79■□□□□ 0.12
HXT12YIL170W DRS1P32892 752 aaKnown RBP15.78■□□□□ 0.12
HXT12YIL170W PEP1P32319 1579 aa15.76■□□□□ 0.11
HXT12YIL170W SIN3P22579 1536 aa15.7■□□□□ 0.1
HXT12YIL170W MTC1P47018 478 aaKnown RBP15.69■□□□□ 0.1
HXT12YIL170W SKI3P17883 1432 aaKnown RBP15.68■□□□□ 0.1
HXT12YIL170W SSK2P53599 1579 aa15.63■□□□□ 0.09
HXT12YIL170W ESP1Q03018 1630 aa15.56■□□□□ 0.08
HXT12YIL170W BPT1P14772 1559 aa15.49■□□□□ 0.07
HXT12YIL170W MYO2P19524 1574 aaKnown RBP15.4■□□□□ 0.06
HXT12YIL170W UFD4P33202 1483 aa15.31■□□□□ 0.04
HXT12YIL170W YPK9Q12697 1472 aa15.29■□□□□ 0.04
HXT12YIL170W SCC2Q04002 1493 aa15.26■□□□□ 0.03
HXT12YIL170W YCF1P39109 1515 aaKnown RBP15.21■□□□□ 0.03
HXT12YIL170W RPO31P04051 1460 aa15.14■□□□□ 0.01
HXT12YIL170W RQC2Q12532 1038 aaKnown RBP15.11■□□□□ 0.01
HXT12YIL170W TY2B-LR1P0C2J3 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-FP0CX63 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-GR2P0CX64 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-CP25384 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-DR2Q03494 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY1B-DR1Q03855 1755 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-DR3Q07791 1770 aaKnown RBP15.09■□□□□ 0.01
HXT12YIL170W TY2B-OR1Q12113 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-DR1Q12472 1770 aa15.09■□□□□ 0.01
HXT12YIL170W TY2B-OR2Q12501 1770 aa15.09■□□□□ 0.01
HXT12YIL170W RKR1Q04781 1562 aa15.02■□□□□ -0
HXT12YIL170W CDC25P04821 1589 aa15□□□□□ -0.01
HXT12YIL170W TOP2P06786 1428 aaKnown RBP14.97□□□□□ -0.01
HXT12YIL170W POL1P13382 1468 aa14.96□□□□□ -0.01
HXT12YIL170W CHD1P32657 1468 aa14.96□□□□□ -0.01
HXT12YIL170W ESC1Q03661 1658 aaKnown RBP14.96□□□□□ -0.01
HXT12YIL170W TY1B-BRQ12193 1756 aa14.96□□□□□ -0.01
HXT12YIL170W TY1B-GR3Q12316 1755 aa14.96□□□□□ -0.01
HXT12YIL170W TY1B-ORQ92393 1755 aa14.96□□□□□ -0.01
HXT12YIL170W STU1P38198 1513 aa14.93□□□□□ -0.02
HXT12YIL170W TY2B-BQ12491 1770 aa14.93□□□□□ -0.02
HXT12YIL170W TY1B-DR3Q99231 1755 aa14.92□□□□□ -0.02
HXT12YIL170W TY1B-HO13535 1793 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-DR5P0C2I2 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-DR6P0C2I3 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-LR2P0C2I5 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-LR3P0C2I6 1755 aaKnown RBP14.86□□□□□ -0.03
HXT12YIL170W TY1B-PR1P0C2I9 1755 aaKnown RBP14.86□□□□□ -0.03
HXT12YIL170W TY1B-PR2P0C2J0 1756 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-PR3P0C2J1 1755 aaKnown RBP14.86□□□□□ -0.03
HXT12YIL170W TY1B-JR1P47098 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-ML2Q03434 1755 aaKnown RBP14.86□□□□□ -0.03
HXT12YIL170W TY1B-ER1Q03612 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-ML1Q04711 1755 aaKnown RBP14.86□□□□□ -0.03
HXT12YIL170W TY1B-GR2Q12269 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-OLQ12273 1755 aa14.86□□□□□ -0.03
HXT12YIL170W TY1B-PLQ12414 1755 aaKnown RBP14.86□□□□□ -0.03
HXT12YIL170W PAN1P32521 1480 aa14.85□□□□□ -0.03
HXT12YIL170W DNF1P32660 1571 aa14.84□□□□□ -0.03
HXT12YIL170W YOR1P53049 1477 aa14.84□□□□□ -0.03
HXT12YIL170W MMS22Q06164 1454 aa14.81□□□□□ -0.04
HXT12YIL170W SMC4Q12267 1418 aa14.78□□□□□ -0.04
HXT12YIL170W RPA190P10964 1664 aaKnown RBP14.76□□□□□ -0.05
HXT12YIL170W SPP41P38904 1435 aa14.69□□□□□ -0.06
HXT12YIL170W TRM732Q03496 1420 aa14.69□□□□□ -0.06
HXT12YIL170W MET5P47169 1442 aa14.68□□□□□ -0.06
HXT12YIL170W YTA7P40340 1379 aa14.6□□□□□ -0.07
HXT12YIL170W TY1B-JR2P47100 1755 aaKnown RBP14.59□□□□□ -0.07
HXT12YIL170W TY1B-ER2Q03619 1755 aa14.59□□□□□ -0.07
HXT12YIL170W TY1B-MR1Q04214 1755 aa14.59□□□□□ -0.07
HXT12YIL170W TY1B-MR2Q04670 1755 aaKnown RBP14.59□□□□□ -0.07
HXT12YIL170W TY1B-LR1Q12088 1755 aaKnown RBP14.59□□□□□ -0.07
HXT12YIL170W TY1B-NL1Q12112 1755 aa14.59□□□□□ -0.07
HXT12YIL170W TY1B-GR1Q12141 1755 aa14.59□□□□□ -0.07
HXT12YIL170W TY1B-BLQ12490 1755 aa14.59□□□□□ -0.07
HXT12YIL170W VTH1P40438 1549 aa14.58□□□□□ -0.07
HXT12YIL170W VTH2P40890 1549 aa14.58□□□□□ -0.07
HXT12YIL170W TSC11P40061 1430 aa14.56□□□□□ -0.08
HXT12YIL170W MYO4P32492 1471 aa14.55□□□□□ -0.08
HXT12YIL170W NTE1Q04958 1679 aa14.54□□□□□ -0.08
HXT12YIL170W NUP159P40477 1460 aa14.52□□□□□ -0.09
HXT12YIL170W LTE1P07866 1435 aa14.48□□□□□ -0.09
HXT12YIL170W RPO21P04050 1733 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms