RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeastyeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG9YHR190W MTC1P47018 478 aaKnown RBP14.09□□□□□ -0.15
ERG9YHR190W DRS1P32892 752 aaKnown RBP13.4□□□□□ -0.26
ERG9YHR190W FAP1P53971 965 aa12.46□□□□□ -0.41
ERG9YHR190W PRI1P10363 409 aa11.73□□□□□ -0.53
ERG9YHR190W ISW2Q08773 1120 aa11.71□□□□□ -0.53
ERG9YHR190W AAD16Q02895 342 aa11.66□□□□□ -0.54
ERG9YHR190W DIP2Q12220 943 aaPredicted RBP11.66□□□□□ -0.54
ERG9YHR190W PRY3P47033 881 aa11.64□□□□□ -0.55
ERG9YHR190W RPG1P38249 964 aaKnown RBP11.49□□□□□ -0.57
ERG9YHR190W BFR2Q06631 534 aaKnown RBP11.28□□□□□ -0.6
ERG9YHR190W AVT3P36062 692 aa11.27□□□□□ -0.61
ERG9YHR190W RSE1Q04693 1361 aaKnown RBP11.25□□□□□ -0.61
ERG9YHR190W TSR3Q12094 313 aaKnown RBP11.07□□□□□ -0.64
ERG9YHR190W HAA1Q12753 694 aaKnown RBP11.01□□□□□ -0.65
ERG9YHR190W RPL17AP05740 184 aaKnown RBP10.84□□□□□ -0.67
ERG9YHR190W REB1P21538 810 aa10.84□□□□□ -0.67
ERG9YHR190W RPL17BP46990 184 aaKnown RBP10.84□□□□□ -0.67
ERG9YHR190W YCK3P39962 524 aa10.83□□□□□ -0.68
ERG9YHR190W MRPL32P25348 183 aa10.74□□□□□ -0.69
ERG9YHR190W SPT21P35209 758 aa10.32□□□□□ -0.76
ERG9YHR190W YGL015CP33199 130 aa10.26□□□□□ -0.77
ERG9YHR190W YKR023WP36119 530 aaKnown RBP10.15□□□□□ -0.78
ERG9YHR190W CDC27P38042 758 aa10.1□□□□□ -0.79
ERG9YHR190W TFA1P36100 482 aa10.07□□□□□ -0.8
ERG9YHR190W RIM101P33400 625 aa10.07□□□□□ -0.8
ERG9YHR190W TFC8Q12308 588 aa9.98□□□□□ -0.81
ERG9YHR190W HOP09932 586 aa9.96□□□□□ -0.82
ERG9YHR190W UBP10P53874 792 aaPredicted RBP9.92□□□□□ -0.82
ERG9YHR190W DCD1P06773 312 aa9.86□□□□□ -0.83
ERG9YHR190W MAP2P38174 421 aaKnown RBP9.81□□□□□ -0.84
ERG9YHR190W YIL055CP40523 627 aaKnown RBP9.69□□□□□ -0.86
ERG9YHR190W SCY1P53009 804 aa9.68□□□□□ -0.86
ERG9YHR190W OXP1P28273 1286 aa9.67□□□□□ -0.86
ERG9YHR190W BCH2P36122 765 aa9.65□□□□□ -0.86
ERG9YHR190W PTP3P40048 928 aa9.63□□□□□ -0.87
ERG9YHR190W SLX5P32828 619 aaKnown RBP9.59□□□□□ -0.87
ERG9YHR190W TIF4632P39936 914 aaKnown RBP9.58□□□□□ -0.88
ERG9YHR190W TGL3P40308 642 aa9.48□□□□□ -0.89
ERG9YHR190W RSM7P47150 247 aa9.48□□□□□ -0.89
ERG9YHR190W YAH1Q12184 172 aaKnown RBP9.48□□□□□ -0.89
ERG9YHR190W EPS1P40557 701 aa9.45□□□□□ -0.9
ERG9YHR190W BBC1P47068 1157 aa9.44□□□□□ -0.9
ERG9YHR190W BDF1P35817 686 aa9.4□□□□□ -0.9
ERG9YHR190W AI2P03876 854 aa9.36□□□□□ -0.91
ERG9YHR190W SSP1P38871 571 aa9.31□□□□□ -0.92
ERG9YHR190W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
ERG9YHR190W YLR271WQ06152 274 aa9.3□□□□□ -0.92
ERG9YHR190W BUD31P25337 157 aaPredicted RBP9.23□□□□□ -0.93
ERG9YHR190W UBP9P39967 754 aa9.19□□□□□ -0.94
ERG9YHR190W PSD2P53037 1138 aaKnown RBP9.14□□□□□ -0.95
ERG9YHR190W NSR1P27476 414 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
ERG9YHR190W YOR238WQ08634 303 aa9.1□□□□□ -0.95
ERG9YHR190W YAP5P40574 245 aa9.08□□□□□ -0.96
ERG9YHR190W MGA2P40578 1113 aa9.08□□□□□ -0.96
ERG9YHR190W MST1P07236 462 aa9.05□□□□□ -0.96
ERG9YHR190W MRM1P25270 412 aa9.03□□□□□ -0.96
ERG9YHR190W CST9Q06032 482 aa8.97□□□□□ -0.97
ERG9YHR190W RTG3P38165 486 aa8.92□□□□□ -0.98
ERG9YHR190W GTT3P39996 337 aa8.9□□□□□ -0.98
ERG9YHR190W SIS1P25294 352 aaKnown RBP8.86□□□□□ -0.99
ERG9YHR190W YBL029C-AQ3E756 94 aa8.85□□□□□ -0.99
ERG9YHR190W YMR1P47147 688 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
ERG9YHR190W VNX1P42839 908 aa8.8□□□□□ -1
ERG9YHR190W VPS29P38759 282 aa8.79□□□□□ -1
ERG9YHR190W PIB1Q06651 286 aa8.79□□□□□ -1
ERG9YHR190W WSC3Q12215 556 aa8.79□□□□□ -1
ERG9YHR190W SPP1Q03012 353 aa8.77□□□□□ -1.01
ERG9YHR190W DBP1P24784 617 aaKnown RBP8.76□□□□□ -1.01
ERG9YHR190W RCR1P38212 213 aa8.7□□□□□ -1.02
ERG9YHR190W TIF11P38912 153 aaKnown RBP8.7□□□□□ -1.02
ERG9YHR190W YFR006WP43590 535 aa8.69□□□□□ -1.02
ERG9YHR190W MSB4Q12317 492 aa8.69□□□□□ -1.02
ERG9YHR190W STS1P38637 319 aa8.67□□□□□ -1.02
ERG9YHR190W EAP1P36041 632 aaKnown RBP8.66□□□□□ -1.02
ERG9YHR190W VMA1P17255 1071 aaKnown RBP8.64□□□□□ -1.03
ERG9YHR190W ULI1P43604 169 aa8.61□□□□□ -1.03
ERG9YHR190W YOL036WQ08206 761 aa8.6□□□□□ -1.03
ERG9YHR190W SAM3Q08986 587 aa8.59□□□□□ -1.03
ERG9YHR190W SET4P42948 560 aa8.58□□□□□ -1.04
ERG9YHR190W MAK11P20484 414 aaKnown RBP8.57□□□□□ -1.04
ERG9YHR190W ABP1P15891 592 aaKnown RBP8.56□□□□□ -1.04
ERG9YHR190W RAM2P29703 316 aa8.54□□□□□ -1.04
ERG9YHR190W LDB19Q12502 818 aa8.54□□□□□ -1.04
ERG9YHR190W IOC2Q12072 812 aa8.54□□□□□ -1.04
ERG9YHR190W GYP5Q12344 894 aa8.52□□□□□ -1.05
ERG9YHR190W TRP5P00931 707 aaKnown RBP8.5□□□□□ -1.05
ERG9YHR190W MIF2P35201 549 aa8.5□□□□□ -1.05
ERG9YHR190W FKH1P40466 484 aa8.5□□□□□ -1.05
ERG9YHR190W YJL171CP46992 396 aa8.5□□□□□ -1.05
ERG9YHR190W HTA1P04911 132 aaKnown RBP8.46□□□□□ -1.06
ERG9YHR190W HTA2P04912 132 aa8.46□□□□□ -1.06
ERG9YHR190W AIR2Q12476 344 aaKnown RBP8.46□□□□□ -1.06
ERG9YHR190W RTG1P32607 177 aa8.44□□□□□ -1.06
ERG9YHR190W YNL035CP53962 389 aaKnown RBP8.44□□□□□ -1.06
ERG9YHR190W GRE2Q12068 342 aaKnown RBP8.44□□□□□ -1.06
ERG9YHR190W COQ8P27697 501 aa8.43□□□□□ -1.06
ERG9YHR190W JIP4Q03361 876 aa8.43□□□□□ -1.06
ERG9YHR190W SEC61P32915 480 aa8.42□□□□□ -1.06
ERG9YHR190W DCW1P36091 449 aa8.41□□□□□ -1.06
ERG9YHR190W TFG1P41895 735 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms