RNA–Protein interactions for RNA: YHR042W

NCP1, Transcript of NADP-cytochrome P450 reductase, yeastyeast

Gene NCP1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NCP1YHR042W SGS1P35187 1447 aa19.42■□□□□ 0.7
NCP1YHR042W INO80P53115 1489 aa18.73■□□□□ 0.59
NCP1YHR042W SPA2P23201 1466 aaKnown RBP18.71■□□□□ 0.59
NCP1YHR042W SSN2P38931 1420 aa18.7■□□□□ 0.58
NCP1YHR042W TCB3Q03640 1545 aaKnown RBP18.39■□□□□ 0.53
NCP1YHR042W DRS1P32892 752 aaKnown RBP18.22■□□□□ 0.51
NCP1YHR042W TY1B-DR4Q07793 1604 aa18.12■□□□□ 0.49
NCP1YHR042W HSL1P34244 1518 aa17.95■□□□□ 0.46
NCP1YHR042W SPT6P23615 1451 aaKnown RBP17.9■□□□□ 0.46
NCP1YHR042W MON2P48563 1636 aaPredicted RBP17.72■□□□□ 0.43
NCP1YHR042W XRN1P22147 1528 aaKnown RBP17.66■□□□□ 0.42
NCP1YHR042W HIR3P47171 1648 aa17.66■□□□□ 0.42
NCP1YHR042W SWR1Q05471 1514 aa17.63■□□□□ 0.41
NCP1YHR042W REV3P14284 1504 aa17.37■□□□□ 0.37
NCP1YHR042W TAF2P23255 1407 aa17.36■□□□□ 0.37
NCP1YHR042W THO2P53552 1597 aaKnown RBP17.19■□□□□ 0.34
NCP1YHR042W SIN3P22579 1536 aa17.16■□□□□ 0.34
NCP1YHR042W SSK2P53599 1579 aa17.14■□□□□ 0.33
NCP1YHR042W DNA2P38859 1522 aa17.01■□□□□ 0.31
NCP1YHR042W ESP1Q03018 1630 aa16.98■□□□□ 0.31
NCP1YHR042W SKI3P17883 1432 aaKnown RBP16.97■□□□□ 0.31
NCP1YHR042W MMS22Q06164 1454 aa16.94■□□□□ 0.3
NCP1YHR042W MYO2P19524 1574 aaKnown RBP16.9■□□□□ 0.3
NCP1YHR042W BUD4P47136 1447 aa16.89■□□□□ 0.3
NCP1YHR042W ECM5Q03214 1411 aa16.89■□□□□ 0.3
NCP1YHR042W KOG1P38873 1557 aa16.87■□□□□ 0.29
NCP1YHR042W CHD1P32657 1468 aa16.86■□□□□ 0.29
NCP1YHR042W STU1P38198 1513 aa16.82■□□□□ 0.28
NCP1YHR042W ATG2P53855 1592 aa16.8■□□□□ 0.28
NCP1YHR042W POL1P13382 1468 aa16.79■□□□□ 0.28
NCP1YHR042W SAS10Q12136 610 aaPredicted RBP16.77■□□□□ 0.28
NCP1YHR042W YPK9Q12697 1472 aa16.72■□□□□ 0.27
NCP1YHR042W YTA7P40340 1379 aa16.69■□□□□ 0.26
NCP1YHR042W BPT1P14772 1559 aa16.69■□□□□ 0.26
NCP1YHR042W RSE1Q04693 1361 aaKnown RBP16.65■□□□□ 0.26
NCP1YHR042W PEP1P32319 1579 aa16.58■□□□□ 0.24
NCP1YHR042W SCC2Q04002 1493 aa16.57■□□□□ 0.24
NCP1YHR042W RKR1Q04781 1562 aa16.56■□□□□ 0.24
NCP1YHR042W MDS3P53094 1487 aa16.56■□□□□ 0.24
NCP1YHR042W YOR1P53049 1477 aa16.52■□□□□ 0.23
NCP1YHR042W RPO31P04051 1460 aa16.47■□□□□ 0.23
NCP1YHR042W UFD4P33202 1483 aa16.43■□□□□ 0.22
NCP1YHR042W TOP2P06786 1428 aaKnown RBP16.41■□□□□ 0.22
NCP1YHR042W TRM732Q03496 1420 aa16.4■□□□□ 0.22
NCP1YHR042W MYO4P32492 1471 aa16.39■□□□□ 0.21
NCP1YHR042W SMC4Q12267 1418 aa16.36■□□□□ 0.21
NCP1YHR042W YCF1P39109 1515 aaKnown RBP16.34■□□□□ 0.21
NCP1YHR042W STH1P32597 1359 aa16.32■□□□□ 0.2
NCP1YHR042W IKI3Q06706 1349 aaKnown RBP16.29■□□□□ 0.2
NCP1YHR042W SNQ2P32568 1501 aaKnown RBP16.27■□□□□ 0.2
NCP1YHR042W TAF7Q05021 590 aa16.26■□□□□ 0.19
NCP1YHR042W IFH1P39520 1085 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-LR1P0C2J3 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-FP0CX63 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-GR2P0CX64 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-CP25384 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-DR2Q03494 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY1B-DR1Q03855 1755 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-DR3Q07791 1770 aaKnown RBP16.24■□□□□ 0.19
NCP1YHR042W TY2B-OR1Q12113 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-DR1Q12472 1770 aa16.24■□□□□ 0.19
NCP1YHR042W TY2B-OR2Q12501 1770 aa16.24■□□□□ 0.19
NCP1YHR042W RQC2Q12532 1038 aaKnown RBP16.21■□□□□ 0.19
NCP1YHR042W TY1B-DR3Q99231 1755 aa16.2■□□□□ 0.18
NCP1YHR042W SSM4P40318 1319 aa16.14■□□□□ 0.17
NCP1YHR042W TY2B-BQ12491 1770 aa16.11■□□□□ 0.17
NCP1YHR042W PDR15Q04182 1529 aaKnown RBP16.1■□□□□ 0.17
NCP1YHR042W MLP2P40457 1679 aa16.07■□□□□ 0.16
NCP1YHR042W SPP41P38904 1435 aa16.07■□□□□ 0.16
NCP1YHR042W GEA1P47102 1408 aaPredicted RBP16.06■□□□□ 0.16
NCP1YHR042W NUP170P38181 1502 aa15.98■□□□□ 0.15
NCP1YHR042W ULS1Q08562 1619 aa15.96■□□□□ 0.15
NCP1YHR042W TY1B-HO13535 1793 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-DR5P0C2I2 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-DR6P0C2I3 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-LR2P0C2I5 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-LR3P0C2I6 1755 aaKnown RBP15.95■□□□□ 0.14
NCP1YHR042W TY1B-PR1P0C2I9 1755 aaKnown RBP15.95■□□□□ 0.14
NCP1YHR042W TY1B-PR2P0C2J0 1756 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-PR3P0C2J1 1755 aaKnown RBP15.95■□□□□ 0.14
NCP1YHR042W TY1B-JR1P47098 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-ML2Q03434 1755 aaKnown RBP15.95■□□□□ 0.14
NCP1YHR042W TY1B-ER1Q03612 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-ML1Q04711 1755 aaKnown RBP15.95■□□□□ 0.14
NCP1YHR042W TY1B-GR2Q12269 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-OLQ12273 1755 aa15.95■□□□□ 0.14
NCP1YHR042W TY1B-PLQ12414 1755 aaKnown RBP15.95■□□□□ 0.14
NCP1YHR042W TSC11P40061 1430 aa15.94■□□□□ 0.14
NCP1YHR042W TY1B-BRQ12193 1756 aa15.92■□□□□ 0.14
NCP1YHR042W TY1B-GR3Q12316 1755 aa15.92■□□□□ 0.14
NCP1YHR042W TY1B-ORQ92393 1755 aa15.92■□□□□ 0.14
NCP1YHR042W VTH1P40438 1549 aa15.91■□□□□ 0.14
NCP1YHR042W VTH2P40890 1549 aa15.91■□□□□ 0.14
NCP1YHR042W PAN1P32521 1480 aa15.87■□□□□ 0.13
NCP1YHR042W CDC25P04821 1589 aa15.84■□□□□ 0.13
NCP1YHR042W TY3B-GQ99315 1547 aa15.84■□□□□ 0.13
NCP1YHR042W SNT2P53127 1403 aa15.81■□□□□ 0.12
NCP1YHR042W NSR1P27476 414 aaKnown RBP RIP-Chip data15.8■□□□□ 0.12not detected
NCP1YHR042W RTT106P40161 455 aa15.78■□□□□ 0.12
NCP1YHR042W ESC1Q03661 1658 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms