RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A MTC1P47018 478 aaKnown RBP14.8□□□□□ -0.04
EFG1YGR271C-A DRS1P32892 752 aaKnown RBP13.92□□□□□ -0.18
EFG1YGR271C-A FAP1P53971 965 aa12.91□□□□□ -0.34
EFG1YGR271C-A PRI1P10363 409 aa12.35□□□□□ -0.43
EFG1YGR271C-A AAD16Q02895 342 aa12.22□□□□□ -0.45
EFG1YGR271C-A ISW2Q08773 1120 aa12.17□□□□□ -0.46
EFG1YGR271C-A PRY3P47033 881 aa12.15□□□□□ -0.46
EFG1YGR271C-A DIP2Q12220 943 aaPredicted RBP12.15□□□□□ -0.46
EFG1YGR271C-A RPG1P38249 964 aaKnown RBP12.01□□□□□ -0.49
EFG1YGR271C-A AVT3P36062 692 aa11.85□□□□□ -0.51
EFG1YGR271C-A RSE1Q04693 1361 aaKnown RBP11.71□□□□□ -0.53
EFG1YGR271C-A BFR2Q06631 534 aaKnown RBP11.67□□□□□ -0.54
EFG1YGR271C-A YCK3P39962 524 aa11.65□□□□□ -0.54
EFG1YGR271C-A TSR3Q12094 313 aaKnown RBP11.6□□□□□ -0.55
EFG1YGR271C-A HAA1Q12753 694 aaKnown RBP11.51□□□□□ -0.57
EFG1YGR271C-A RPL17AP05740 184 aaKnown RBP11.3□□□□□ -0.6
EFG1YGR271C-A RPL17BP46990 184 aaKnown RBP11.3□□□□□ -0.6
EFG1YGR271C-A REB1P21538 810 aa11.2□□□□□ -0.62
EFG1YGR271C-A MRPL32P25348 183 aa11.16□□□□□ -0.62
EFG1YGR271C-A SPT21P35209 758 aa10.95□□□□□ -0.66
EFG1YGR271C-A YKR023WP36119 530 aaKnown RBP10.73□□□□□ -0.69
EFG1YGR271C-A CDC27P38042 758 aa10.69□□□□□ -0.7
EFG1YGR271C-A YGL015CP33199 130 aa10.67□□□□□ -0.7
EFG1YGR271C-A RIM101P33400 625 aa10.59□□□□□ -0.71
EFG1YGR271C-A TFC8Q12308 588 aa10.51□□□□□ -0.73
EFG1YGR271C-A TFA1P36100 482 aa10.5□□□□□ -0.73
EFG1YGR271C-A UBP10P53874 792 aaPredicted RBP10.43□□□□□ -0.74
EFG1YGR271C-A HOP09932 586 aa10.42□□□□□ -0.74
EFG1YGR271C-A DCD1P06773 312 aa10.35□□□□□ -0.75
EFG1YGR271C-A MAP2P38174 421 aaKnown RBP10.32□□□□□ -0.76
EFG1YGR271C-A OXP1P28273 1286 aa10.21□□□□□ -0.77
EFG1YGR271C-A BCH2P36122 765 aa10.14□□□□□ -0.79
EFG1YGR271C-A SCY1P53009 804 aa10.12□□□□□ -0.79
EFG1YGR271C-A SLX5P32828 619 aaKnown RBP10.01□□□□□ -0.81
EFG1YGR271C-A YIL055CP40523 627 aaKnown RBP9.96□□□□□ -0.82
EFG1YGR271C-A PTP3P40048 928 aa9.94□□□□□ -0.82
EFG1YGR271C-A TGL3P40308 642 aa9.92□□□□□ -0.82
EFG1YGR271C-A TIF4632P39936 914 aaKnown RBP9.91□□□□□ -0.82
EFG1YGR271C-A EPS1P40557 701 aa9.91□□□□□ -0.82
EFG1YGR271C-A RSM7P47150 247 aa9.88□□□□□ -0.83
EFG1YGR271C-A BDF1P35817 686 aa9.87□□□□□ -0.83
EFG1YGR271C-A YAH1Q12184 172 aaKnown RBP9.81□□□□□ -0.84
EFG1YGR271C-A AI2P03876 854 aa9.77□□□□□ -0.85
EFG1YGR271C-A YLR271WQ06152 274 aa9.77□□□□□ -0.85
EFG1YGR271C-A BUD31P25337 157 aaPredicted RBP9.75□□□□□ -0.85
EFG1YGR271C-A BBC1P47068 1157 aa9.74□□□□□ -0.85
EFG1YGR271C-A SSP1P38871 571 aa9.7□□□□□ -0.86
EFG1YGR271C-A NSR1P27476 414 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
EFG1YGR271C-A PSD2P53037 1138 aaKnown RBP9.65□□□□□ -0.86
EFG1YGR271C-A MST1P07236 462 aa9.6□□□□□ -0.87
EFG1YGR271C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
EFG1YGR271C-A UBP9P39967 754 aa9.49□□□□□ -0.89
EFG1YGR271C-A YOR238WQ08634 303 aa9.48□□□□□ -0.89
EFG1YGR271C-A YAP5P40574 245 aa9.46□□□□□ -0.9
EFG1YGR271C-A MGA2P40578 1113 aa9.45□□□□□ -0.9
EFG1YGR271C-A CST9Q06032 482 aa9.42□□□□□ -0.9
EFG1YGR271C-A MRM1P25270 412 aa9.4□□□□□ -0.9
EFG1YGR271C-A YBL029C-AQ3E756 94 aa9.28□□□□□ -0.92
EFG1YGR271C-A VPS29P38759 282 aa9.27□□□□□ -0.93
EFG1YGR271C-A RTG3P38165 486 aa9.25□□□□□ -0.93
EFG1YGR271C-A VNX1P42839 908 aa9.25□□□□□ -0.93
EFG1YGR271C-A YMR1P47147 688 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
EFG1YGR271C-A SIS1P25294 352 aaKnown RBP9.2□□□□□ -0.94
EFG1YGR271C-A GTT3P39996 337 aa9.18□□□□□ -0.94
EFG1YGR271C-A RCR1P38212 213 aa9.16□□□□□ -0.94
EFG1YGR271C-A STS1P38637 319 aa9.15□□□□□ -0.94
EFG1YGR271C-A PIB1Q06651 286 aa9.15□□□□□ -0.94
EFG1YGR271C-A DBP1P24784 617 aaKnown RBP9.14□□□□□ -0.95
EFG1YGR271C-A WSC3Q12215 556 aa9.12□□□□□ -0.95
EFG1YGR271C-A TIF11P38912 153 aaKnown RBP9.1□□□□□ -0.95
EFG1YGR271C-A SPP1Q03012 353 aa9.1□□□□□ -0.95
EFG1YGR271C-A MSB4Q12317 492 aa9.09□□□□□ -0.95
EFG1YGR271C-A SAM3Q08986 587 aa9.08□□□□□ -0.96
EFG1YGR271C-A VMA1P17255 1071 aaKnown RBP9.07□□□□□ -0.96
EFG1YGR271C-A YFR006WP43590 535 aa9.07□□□□□ -0.96
EFG1YGR271C-A YOL036WQ08206 761 aa9.04□□□□□ -0.96
EFG1YGR271C-A IOC2Q12072 812 aa9.01□□□□□ -0.97
EFG1YGR271C-A RAM2P29703 316 aa9□□□□□ -0.97
EFG1YGR271C-A FKH1P40466 484 aa9□□□□□ -0.97
EFG1YGR271C-A EAP1P36041 632 aaKnown RBP8.98□□□□□ -0.97
EFG1YGR271C-A ULI1P43604 169 aa8.97□□□□□ -0.97
EFG1YGR271C-A MAK11P20484 414 aaKnown RBP8.96□□□□□ -0.98
EFG1YGR271C-A SET4P42948 560 aa8.95□□□□□ -0.98
EFG1YGR271C-A AIR2Q12476 344 aaKnown RBP8.94□□□□□ -0.98
EFG1YGR271C-A LDB19Q12502 818 aa8.93□□□□□ -0.98
EFG1YGR271C-A ABP1P15891 592 aaKnown RBP8.92□□□□□ -0.98
EFG1YGR271C-A TRP5P00931 707 aaKnown RBP8.89□□□□□ -0.99
EFG1YGR271C-A GYP5Q12344 894 aa8.86□□□□□ -0.99
EFG1YGR271C-A EDS1P38073 919 aa8.84□□□□□ -0.99
EFG1YGR271C-A YNL035CP53962 389 aaKnown RBP8.82□□□□□ -1
EFG1YGR271C-A COQ8P27697 501 aa8.8□□□□□ -1
EFG1YGR271C-A RTG1P32607 177 aa8.8□□□□□ -1
EFG1YGR271C-A SEC61P32915 480 aa8.8□□□□□ -1
EFG1YGR271C-A HTA1P04911 132 aaKnown RBP8.79□□□□□ -1
EFG1YGR271C-A HTA2P04912 132 aa8.79□□□□□ -1
EFG1YGR271C-A PTC3P34221 468 aaKnown RBP8.79□□□□□ -1
EFG1YGR271C-A JIP4Q03361 876 aa8.78□□□□□ -1
EFG1YGR271C-A MIF2P35201 549 aa8.77□□□□□ -1.01
EFG1YGR271C-A DAN4P47179 1161 aa8.77□□□□□ -1.01
EFG1YGR271C-A GRE2Q12068 342 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms