RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeastyeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC2YGR244C SGS1P35187 1447 aa17.98■□□□□ 0.47
LSC2YGR244C INO80P53115 1489 aa17.69■□□□□ 0.42
LSC2YGR244C TCB3Q03640 1545 aaKnown RBP17.58■□□□□ 0.41
LSC2YGR244C MON2P48563 1636 aaPredicted RBP17.52■□□□□ 0.4
LSC2YGR244C TY1B-DR4Q07793 1604 aa17.31■□□□□ 0.36
LSC2YGR244C SWR1Q05471 1514 aa17.1■□□□□ 0.33
LSC2YGR244C SSN2P38931 1420 aa16.98■□□□□ 0.31
LSC2YGR244C SPT6P23615 1451 aaKnown RBP16.97■□□□□ 0.31
LSC2YGR244C HSL1P34244 1518 aa16.96■□□□□ 0.31
LSC2YGR244C SPA2P23201 1466 aaKnown RBP16.96■□□□□ 0.31
LSC2YGR244C DNA2P38859 1522 aa16.75■□□□□ 0.27
LSC2YGR244C KOG1P38873 1557 aa16.68■□□□□ 0.26
LSC2YGR244C HIR3P47171 1648 aa16.66■□□□□ 0.26
LSC2YGR244C DRS1P32892 752 aaKnown RBP16.63■□□□□ 0.25
LSC2YGR244C XRN1P22147 1528 aaKnown RBP16.55■□□□□ 0.24
LSC2YGR244C REV3P14284 1504 aa16.27■□□□□ 0.2
LSC2YGR244C BUD4P47136 1447 aa16.24■□□□□ 0.19
LSC2YGR244C ECM5Q03214 1411 aa16.24■□□□□ 0.19
LSC2YGR244C THO2P53552 1597 aaKnown RBP16.22■□□□□ 0.19
LSC2YGR244C TAF2P23255 1407 aa16.17■□□□□ 0.18
LSC2YGR244C SIN3P22579 1536 aa16.09■□□□□ 0.17
LSC2YGR244C SSK2P53599 1579 aa16■□□□□ 0.15
LSC2YGR244C SKI3P17883 1432 aaKnown RBP15.98■□□□□ 0.15
LSC2YGR244C MDS3P53094 1487 aa15.94■□□□□ 0.14
LSC2YGR244C ATG2P53855 1592 aa15.94■□□□□ 0.14
LSC2YGR244C ESP1Q03018 1630 aa15.9■□□□□ 0.14
LSC2YGR244C MYO2P19524 1574 aaKnown RBP15.86■□□□□ 0.13
LSC2YGR244C PEP1P32319 1579 aa15.83■□□□□ 0.13
LSC2YGR244C RSE1Q04693 1361 aaKnown RBP15.77■□□□□ 0.12
LSC2YGR244C YPK9Q12697 1472 aa15.68■□□□□ 0.1
LSC2YGR244C SCC2Q04002 1493 aa15.57■□□□□ 0.08
LSC2YGR244C UFD4P33202 1483 aa15.55■□□□□ 0.08
LSC2YGR244C MTC1P47018 478 aaKnown RBP15.54■□□□□ 0.08
LSC2YGR244C BPT1P14772 1559 aa15.51■□□□□ 0.07
LSC2YGR244C POL1P13382 1468 aa15.51■□□□□ 0.07
LSC2YGR244C RPO31P04051 1460 aa15.48■□□□□ 0.07
LSC2YGR244C STU1P38198 1513 aa15.48■□□□□ 0.07
LSC2YGR244C RKR1Q04781 1562 aa15.43■□□□□ 0.06
LSC2YGR244C RQC2Q12532 1038 aaKnown RBP15.4■□□□□ 0.06
LSC2YGR244C TOP2P06786 1428 aaKnown RBP15.38■□□□□ 0.05
LSC2YGR244C YTA7P40340 1379 aa15.36■□□□□ 0.05
LSC2YGR244C YCF1P39109 1515 aaKnown RBP15.34■□□□□ 0.05
LSC2YGR244C YOR1P53049 1477 aa15.33■□□□□ 0.04
LSC2YGR244C SMC4Q12267 1418 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-LR1P0C2J3 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-FP0CX63 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-GR2P0CX64 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-CP25384 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-DR2Q03494 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY1B-DR1Q03855 1755 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-DR3Q07791 1770 aaKnown RBP15.27■□□□□ 0.04
LSC2YGR244C TY2B-OR1Q12113 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-DR1Q12472 1770 aa15.27■□□□□ 0.04
LSC2YGR244C TY2B-OR2Q12501 1770 aa15.27■□□□□ 0.04
LSC2YGR244C SAS10Q12136 610 aaPredicted RBP15.18■□□□□ 0.02
LSC2YGR244C CHD1P32657 1468 aa15.16■□□□□ 0.02
LSC2YGR244C MYO4P32492 1471 aa15.15■□□□□ 0.02
LSC2YGR244C TY1B-DR3Q99231 1755 aa15.15■□□□□ 0.02
LSC2YGR244C CDC25P04821 1589 aa15.15■□□□□ 0.02
LSC2YGR244C TY2B-BQ12491 1770 aa15.13■□□□□ 0.01
LSC2YGR244C MMS22Q06164 1454 aa15.13■□□□□ 0.01
LSC2YGR244C TY1B-BRQ12193 1756 aa15.08■□□□□ 0.01
LSC2YGR244C TY1B-GR3Q12316 1755 aa15.08■□□□□ 0.01
LSC2YGR244C TY1B-ORQ92393 1755 aa15.08■□□□□ 0.01
LSC2YGR244C SPP41P38904 1435 aa15.08■□□□□ 0
LSC2YGR244C PAN1P32521 1480 aa15.08■□□□□ 0
LSC2YGR244C TY1B-HO13535 1793 aa15.03■□□□□ -0
LSC2YGR244C TY1B-DR5P0C2I2 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-DR6P0C2I3 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-LR2P0C2I5 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-LR3P0C2I6 1755 aaKnown RBP15.03■□□□□ -0
LSC2YGR244C TY1B-PR1P0C2I9 1755 aaKnown RBP15.03■□□□□ -0
LSC2YGR244C TY1B-PR2P0C2J0 1756 aa15.03■□□□□ -0
LSC2YGR244C TY1B-PR3P0C2J1 1755 aaKnown RBP15.03■□□□□ -0
LSC2YGR244C TY1B-JR1P47098 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-ML2Q03434 1755 aaKnown RBP15.03■□□□□ -0
LSC2YGR244C TY1B-ER1Q03612 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-ML1Q04711 1755 aaKnown RBP15.03■□□□□ -0
LSC2YGR244C TY1B-GR2Q12269 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-OLQ12273 1755 aa15.03■□□□□ -0
LSC2YGR244C TY1B-PLQ12414 1755 aaKnown RBP15.03■□□□□ -0
LSC2YGR244C TAF7Q05021 590 aa15.02■□□□□ -0
LSC2YGR244C ESC1Q03661 1658 aaKnown RBP15.01□□□□□ -0.01
LSC2YGR244C STH1P32597 1359 aa14.98□□□□□ -0.01
LSC2YGR244C TRM732Q03496 1420 aa14.97□□□□□ -0.01
LSC2YGR244C TSC11P40061 1430 aa14.95□□□□□ -0.02
LSC2YGR244C SNQ2P32568 1501 aaKnown RBP14.93□□□□□ -0.02
LSC2YGR244C VTH1P40438 1549 aa14.92□□□□□ -0.02
LSC2YGR244C VTH2P40890 1549 aa14.92□□□□□ -0.02
LSC2YGR244C DNF1P32660 1571 aa14.89□□□□□ -0.03
LSC2YGR244C RPA190P10964 1664 aaKnown RBP14.84□□□□□ -0.03
LSC2YGR244C IFH1P39520 1085 aa14.84□□□□□ -0.03
LSC2YGR244C RTT106P40161 455 aa14.83□□□□□ -0.04
LSC2YGR244C MLP2P40457 1679 aa14.83□□□□□ -0.04
LSC2YGR244C TY1B-JR2P47100 1755 aaKnown RBP14.78□□□□□ -0.04
LSC2YGR244C TY1B-ER2Q03619 1755 aa14.78□□□□□ -0.04
LSC2YGR244C TY1B-MR1Q04214 1755 aa14.78□□□□□ -0.04
LSC2YGR244C TY1B-MR2Q04670 1755 aaKnown RBP14.78□□□□□ -0.04
LSC2YGR244C TY1B-LR1Q12088 1755 aaKnown RBP14.78□□□□□ -0.04
LSC2YGR244C TY1B-NL1Q12112 1755 aa14.78□□□□□ -0.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms