RNA–Protein interactions for RNA: YGR175C

ERG1, Transcript of Squalene epoxidase, yeastyeast

Gene ERG1, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG1YGR175C MON2P48563 1636 aaPredicted RBP12.38□□□□□ -0.43
ERG1YGR175C INO80P53115 1489 aa12.37□□□□□ -0.43
ERG1YGR175C TCB3Q03640 1545 aaKnown RBP11.96□□□□□ -0.49
ERG1YGR175C SGS1P35187 1447 aa11.93□□□□□ -0.5
ERG1YGR175C SWR1Q05471 1514 aa11.87□□□□□ -0.51
ERG1YGR175C TY1B-DR4Q07793 1604 aa11.87□□□□□ -0.51
ERG1YGR175C DNA2P38859 1522 aa11.78□□□□□ -0.52
ERG1YGR175C KOG1P38873 1557 aa11.68□□□□□ -0.54
ERG1YGR175C HSL1P34244 1518 aa11.5□□□□□ -0.57
ERG1YGR175C SPT6P23615 1451 aaKnown RBP11.49□□□□□ -0.57
ERG1YGR175C SPA2P23201 1466 aaKnown RBP11.42□□□□□ -0.58
ERG1YGR175C HIR3P47171 1648 aa11.27□□□□□ -0.6
ERG1YGR175C RSE1Q04693 1361 aaKnown RBP11.26□□□□□ -0.61
ERG1YGR175C ECM5Q03214 1411 aa11.16□□□□□ -0.62
ERG1YGR175C THO2P53552 1597 aaKnown RBP11.13□□□□□ -0.63
ERG1YGR175C BUD4P47136 1447 aa11.11□□□□□ -0.63
ERG1YGR175C XRN1P22147 1528 aaKnown RBP11.1□□□□□ -0.63
ERG1YGR175C SSN2P38931 1420 aa11.07□□□□□ -0.64
ERG1YGR175C MDS3P53094 1487 aa10.96□□□□□ -0.65
ERG1YGR175C REV3P14284 1504 aa10.91□□□□□ -0.66
ERG1YGR175C PEP1P32319 1579 aa10.87□□□□□ -0.67
ERG1YGR175C ATG2P53855 1592 aa10.86□□□□□ -0.67
ERG1YGR175C MTC1P47018 478 aaKnown RBP10.82□□□□□ -0.68
ERG1YGR175C SIN3P22579 1536 aa10.8□□□□□ -0.68
ERG1YGR175C DRS1P32892 752 aaKnown RBP10.78□□□□□ -0.68
ERG1YGR175C TAF2P23255 1407 aa10.77□□□□□ -0.68
ERG1YGR175C SKI3P17883 1432 aaKnown RBP10.74□□□□□ -0.69
ERG1YGR175C SSK2P53599 1579 aa10.71□□□□□ -0.69
ERG1YGR175C BPT1P14772 1559 aa10.69□□□□□ -0.7
ERG1YGR175C ESP1Q03018 1630 aa10.68□□□□□ -0.7
ERG1YGR175C MYO2P19524 1574 aaKnown RBP10.56□□□□□ -0.72
ERG1YGR175C UFD4P33202 1483 aa10.52□□□□□ -0.73
ERG1YGR175C YPK9Q12697 1472 aa10.51□□□□□ -0.73
ERG1YGR175C YCF1P39109 1515 aaKnown RBP10.5□□□□□ -0.73
ERG1YGR175C SCC2Q04002 1493 aa10.48□□□□□ -0.73
ERG1YGR175C RPO31P04051 1460 aa10.43□□□□□ -0.74
ERG1YGR175C TY2B-LR1P0C2J3 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-FP0CX63 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-GR2P0CX64 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-CP25384 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-DR2Q03494 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY1B-DR1Q03855 1755 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-DR3Q07791 1770 aaKnown RBP10.36□□□□□ -0.75
ERG1YGR175C TY2B-OR1Q12113 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-DR1Q12472 1770 aa10.36□□□□□ -0.75
ERG1YGR175C TY2B-OR2Q12501 1770 aa10.36□□□□□ -0.75
ERG1YGR175C CDC25P04821 1589 aa10.33□□□□□ -0.76
ERG1YGR175C CHD1P32657 1468 aa10.32□□□□□ -0.76
ERG1YGR175C RQC2Q12532 1038 aaKnown RBP10.31□□□□□ -0.76
ERG1YGR175C TY1B-BRQ12193 1756 aa10.29□□□□□ -0.76
ERG1YGR175C TY1B-GR3Q12316 1755 aa10.29□□□□□ -0.76
ERG1YGR175C TY1B-ORQ92393 1755 aa10.29□□□□□ -0.76
ERG1YGR175C TOP2P06786 1428 aaKnown RBP10.29□□□□□ -0.76
ERG1YGR175C ESC1Q03661 1658 aaKnown RBP10.28□□□□□ -0.76
ERG1YGR175C RKR1Q04781 1562 aa10.27□□□□□ -0.77
ERG1YGR175C POL1P13382 1468 aa10.25□□□□□ -0.77
ERG1YGR175C TY2B-BQ12491 1770 aa10.25□□□□□ -0.77
ERG1YGR175C PAN1P32521 1480 aa10.24□□□□□ -0.77
ERG1YGR175C TY1B-DR3Q99231 1755 aa10.23□□□□□ -0.77
ERG1YGR175C TY1B-HO13535 1793 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-DR5P0C2I2 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-DR6P0C2I3 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-LR2P0C2I5 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-LR3P0C2I6 1755 aaKnown RBP10.22□□□□□ -0.77
ERG1YGR175C TY1B-PR1P0C2I9 1755 aaKnown RBP10.22□□□□□ -0.77
ERG1YGR175C TY1B-PR2P0C2J0 1756 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-PR3P0C2J1 1755 aaKnown RBP10.22□□□□□ -0.77
ERG1YGR175C TY1B-JR1P47098 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-ML2Q03434 1755 aaKnown RBP10.22□□□□□ -0.77
ERG1YGR175C TY1B-ER1Q03612 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-ML1Q04711 1755 aaKnown RBP10.22□□□□□ -0.77
ERG1YGR175C TY1B-GR2Q12269 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-OLQ12273 1755 aa10.22□□□□□ -0.77
ERG1YGR175C TY1B-PLQ12414 1755 aaKnown RBP10.22□□□□□ -0.77
ERG1YGR175C DNF1P32660 1571 aa10.22□□□□□ -0.77
ERG1YGR175C MET5P47169 1442 aa10.21□□□□□ -0.78
ERG1YGR175C MMS22Q06164 1454 aa10.18□□□□□ -0.78
ERG1YGR175C STU1P38198 1513 aa10.18□□□□□ -0.78
ERG1YGR175C RPA190P10964 1664 aaKnown RBP10.17□□□□□ -0.78
ERG1YGR175C SMC4Q12267 1418 aa10.16□□□□□ -0.78
ERG1YGR175C YOR1P53049 1477 aa10.16□□□□□ -0.78
ERG1YGR175C TRM732Q03496 1420 aa10.1□□□□□ -0.79
ERG1YGR175C SPP41P38904 1435 aa10.08□□□□□ -0.8
ERG1YGR175C LTE1P07866 1435 aa10.07□□□□□ -0.8
ERG1YGR175C TY1B-JR2P47100 1755 aaKnown RBP10.03□□□□□ -0.8
ERG1YGR175C TY1B-ER2Q03619 1755 aa10.03□□□□□ -0.8
ERG1YGR175C TY1B-MR1Q04214 1755 aa10.03□□□□□ -0.8
ERG1YGR175C TY1B-MR2Q04670 1755 aaKnown RBP10.03□□□□□ -0.8
ERG1YGR175C TY1B-LR1Q12088 1755 aaKnown RBP10.03□□□□□ -0.8
ERG1YGR175C TY1B-NL1Q12112 1755 aa10.03□□□□□ -0.8
ERG1YGR175C TY1B-GR1Q12141 1755 aa10.03□□□□□ -0.8
ERG1YGR175C TY1B-BLQ12490 1755 aa10.03□□□□□ -0.8
ERG1YGR175C YTA7P40340 1379 aa10.01□□□□□ -0.81
ERG1YGR175C TSC11P40061 1430 aa10.01□□□□□ -0.81
ERG1YGR175C VTH1P40438 1549 aa9.99□□□□□ -0.81
ERG1YGR175C VTH2P40890 1549 aa9.99□□□□□ -0.81
ERG1YGR175C NUP159P40477 1460 aa9.98□□□□□ -0.81
ERG1YGR175C GEA2P39993 1459 aaKnown RBP9.98□□□□□ -0.81
ERG1YGR175C YRF1-1P0CX20 1796 aa9.97□□□□□ -0.81
ERG1YGR175C YRF1-5P0CX21 1796 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms