RNA–Protein interactions for RNA: YGR087C

PDC6, Transcript of Minor isoform of pyruvate decarboxylase, yeastyeast

Gene PDC6, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC6YGR087C SGS1P35187 1447 aa14.68□□□□□ -0.06
PDC6YGR087C INO80P53115 1489 aa14.61□□□□□ -0.07
PDC6YGR087C MON2P48563 1636 aaPredicted RBP14.54□□□□□ -0.08
PDC6YGR087C TCB3Q03640 1545 aaKnown RBP14.41□□□□□ -0.1
PDC6YGR087C TY1B-DR4Q07793 1604 aa14.24□□□□□ -0.13
PDC6YGR087C SWR1Q05471 1514 aa14.13□□□□□ -0.15
PDC6YGR087C HSL1P34244 1518 aa13.93□□□□□ -0.18
PDC6YGR087C SPT6P23615 1451 aaKnown RBP13.93□□□□□ -0.18
PDC6YGR087C DNA2P38859 1522 aa13.91□□□□□ -0.18
PDC6YGR087C SPA2P23201 1466 aaKnown RBP13.88□□□□□ -0.19
PDC6YGR087C SSN2P38931 1420 aa13.81□□□□□ -0.2
PDC6YGR087C KOG1P38873 1557 aa13.77□□□□□ -0.2
PDC6YGR087C HIR3P47171 1648 aa13.67□□□□□ -0.22
PDC6YGR087C XRN1P22147 1528 aaKnown RBP13.57□□□□□ -0.24
PDC6YGR087C DRS1P32892 752 aaKnown RBP13.47□□□□□ -0.25
PDC6YGR087C ECM5Q03214 1411 aa13.4□□□□□ -0.26
PDC6YGR087C BUD4P47136 1447 aa13.36□□□□□ -0.27
PDC6YGR087C REV3P14284 1504 aa13.31□□□□□ -0.28
PDC6YGR087C THO2P53552 1597 aaKnown RBP13.31□□□□□ -0.28
PDC6YGR087C TAF2P23255 1407 aa13.26□□□□□ -0.29
PDC6YGR087C SIN3P22579 1536 aa13.14□□□□□ -0.31
PDC6YGR087C MDS3P53094 1487 aa13.14□□□□□ -0.31
PDC6YGR087C RSE1Q04693 1361 aaKnown RBP13.13□□□□□ -0.31
PDC6YGR087C ATG2P53855 1592 aa13.11□□□□□ -0.31
PDC6YGR087C SKI3P17883 1432 aaKnown RBP13.09□□□□□ -0.31
PDC6YGR087C SSK2P53599 1579 aa13.08□□□□□ -0.32
PDC6YGR087C PEP1P32319 1579 aa13.05□□□□□ -0.32
PDC6YGR087C ESP1Q03018 1630 aa13□□□□□ -0.33
PDC6YGR087C MYO2P19524 1574 aaKnown RBP12.9□□□□□ -0.34
PDC6YGR087C MTC1P47018 478 aaKnown RBP12.83□□□□□ -0.35
PDC6YGR087C YPK9Q12697 1472 aa12.83□□□□□ -0.36
PDC6YGR087C UFD4P33202 1483 aa12.76□□□□□ -0.37
PDC6YGR087C BPT1P14772 1559 aa12.76□□□□□ -0.37
PDC6YGR087C SCC2Q04002 1493 aa12.76□□□□□ -0.37
PDC6YGR087C RPO31P04051 1460 aa12.69□□□□□ -0.38
PDC6YGR087C POL1P13382 1468 aa12.64□□□□□ -0.39
PDC6YGR087C STU1P38198 1513 aa12.61□□□□□ -0.39
PDC6YGR087C RQC2Q12532 1038 aaKnown RBP12.61□□□□□ -0.39
PDC6YGR087C RKR1Q04781 1562 aa12.6□□□□□ -0.39
PDC6YGR087C YCF1P39109 1515 aaKnown RBP12.58□□□□□ -0.4
PDC6YGR087C TOP2P06786 1428 aaKnown RBP12.57□□□□□ -0.4
PDC6YGR087C TY2B-LR1P0C2J3 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-FP0CX63 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-GR2P0CX64 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-CP25384 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-DR2Q03494 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY1B-DR1Q03855 1755 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-DR3Q07791 1770 aaKnown RBP12.53□□□□□ -0.4
PDC6YGR087C TY2B-OR1Q12113 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-DR1Q12472 1770 aa12.53□□□□□ -0.4
PDC6YGR087C TY2B-OR2Q12501 1770 aa12.53□□□□□ -0.4
PDC6YGR087C YOR1P53049 1477 aa12.5□□□□□ -0.41
PDC6YGR087C CHD1P32657 1468 aa12.46□□□□□ -0.42
PDC6YGR087C SMC4Q12267 1418 aa12.45□□□□□ -0.42
PDC6YGR087C CDC25P04821 1589 aa12.44□□□□□ -0.42
PDC6YGR087C YTA7P40340 1379 aa12.43□□□□□ -0.42
PDC6YGR087C TY1B-DR3Q99231 1755 aa12.42□□□□□ -0.42
PDC6YGR087C TY2B-BQ12491 1770 aa12.41□□□□□ -0.42
PDC6YGR087C TY1B-BRQ12193 1756 aa12.39□□□□□ -0.43
PDC6YGR087C TY1B-GR3Q12316 1755 aa12.39□□□□□ -0.43
PDC6YGR087C TY1B-ORQ92393 1755 aa12.39□□□□□ -0.43
PDC6YGR087C MMS22Q06164 1454 aa12.37□□□□□ -0.43
PDC6YGR087C PAN1P32521 1480 aa12.36□□□□□ -0.43
PDC6YGR087C TY1B-HO13535 1793 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-DR5P0C2I2 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-DR6P0C2I3 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-LR2P0C2I5 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-LR3P0C2I6 1755 aaKnown RBP12.34□□□□□ -0.43
PDC6YGR087C TY1B-PR1P0C2I9 1755 aaKnown RBP12.34□□□□□ -0.43
PDC6YGR087C TY1B-PR2P0C2J0 1756 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-PR3P0C2J1 1755 aaKnown RBP12.34□□□□□ -0.43
PDC6YGR087C TY1B-JR1P47098 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-ML2Q03434 1755 aaKnown RBP12.34□□□□□ -0.43
PDC6YGR087C TY1B-ER1Q03612 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-ML1Q04711 1755 aaKnown RBP12.34□□□□□ -0.43
PDC6YGR087C TY1B-GR2Q12269 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-OLQ12273 1755 aa12.34□□□□□ -0.43
PDC6YGR087C TY1B-PLQ12414 1755 aaKnown RBP12.34□□□□□ -0.43
PDC6YGR087C SPP41P38904 1435 aa12.32□□□□□ -0.44
PDC6YGR087C ESC1Q03661 1658 aaKnown RBP12.32□□□□□ -0.44
PDC6YGR087C SAS10Q12136 610 aaPredicted RBP12.31□□□□□ -0.44
PDC6YGR087C MYO4P32492 1471 aa12.3□□□□□ -0.44
PDC6YGR087C DNF1P32660 1571 aa12.29□□□□□ -0.44
PDC6YGR087C TRM732Q03496 1420 aa12.25□□□□□ -0.45
PDC6YGR087C TSC11P40061 1430 aa12.23□□□□□ -0.45
PDC6YGR087C VTH1P40438 1549 aa12.2□□□□□ -0.46
PDC6YGR087C VTH2P40890 1549 aa12.2□□□□□ -0.46
PDC6YGR087C RPA190P10964 1664 aaKnown RBP12.2□□□□□ -0.46
PDC6YGR087C STH1P32597 1359 aa12.18□□□□□ -0.46
PDC6YGR087C SNQ2P32568 1501 aaKnown RBP12.15□□□□□ -0.46
PDC6YGR087C MET5P47169 1442 aa12.13□□□□□ -0.47
PDC6YGR087C TY1B-JR2P47100 1755 aaKnown RBP12.13□□□□□ -0.47
PDC6YGR087C TY1B-ER2Q03619 1755 aa12.13□□□□□ -0.47
PDC6YGR087C TY1B-MR1Q04214 1755 aa12.13□□□□□ -0.47
PDC6YGR087C TY1B-MR2Q04670 1755 aaKnown RBP12.13□□□□□ -0.47
PDC6YGR087C TY1B-LR1Q12088 1755 aaKnown RBP12.13□□□□□ -0.47
PDC6YGR087C TY1B-NL1Q12112 1755 aa12.13□□□□□ -0.47
PDC6YGR087C TY1B-GR1Q12141 1755 aa12.13□□□□□ -0.47
PDC6YGR087C TY1B-BLQ12490 1755 aa12.13□□□□□ -0.47
PDC6YGR087C TAF7Q05021 590 aa12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms