RNA–Protein interactions for RNA: YGR040W

KSS1, Transcript of Mitogen-activated protein kinase (MAPK), yeastyeast

Gene KSS1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSS1YGR040W MTC1P47018 478 aaKnown RBP16.05■□□□□ 0.16
KSS1YGR040W DRS1P32892 752 aaKnown RBP15.48■□□□□ 0.07
KSS1YGR040W FAP1P53971 965 aa13.78□□□□□ -0.2
KSS1YGR040W DIP2Q12220 943 aaPredicted RBP13.38□□□□□ -0.27
KSS1YGR040W PRI1P10363 409 aa13.21□□□□□ -0.29
KSS1YGR040W ISW2Q08773 1120 aa13.21□□□□□ -0.29
KSS1YGR040W BFR2Q06631 534 aaKnown RBP13.16□□□□□ -0.3
KSS1YGR040W AVT3P36062 692 aa13.06□□□□□ -0.32
KSS1YGR040W AAD16Q02895 342 aa13.06□□□□□ -0.32
KSS1YGR040W RPG1P38249 964 aaKnown RBP12.98□□□□□ -0.33
KSS1YGR040W PRY3P47033 881 aa12.97□□□□□ -0.33
KSS1YGR040W RSE1Q04693 1361 aaKnown RBP12.82□□□□□ -0.36
KSS1YGR040W TSR3Q12094 313 aaKnown RBP12.46□□□□□ -0.41
KSS1YGR040W RPL17AP05740 184 aaKnown RBP12.35□□□□□ -0.43
KSS1YGR040W RPL17BP46990 184 aaKnown RBP12.35□□□□□ -0.43
KSS1YGR040W YCK3P39962 524 aa12.32□□□□□ -0.44
KSS1YGR040W REB1P21538 810 aa12.27□□□□□ -0.45
KSS1YGR040W HAA1Q12753 694 aaKnown RBP12.23□□□□□ -0.45
KSS1YGR040W MRPL32P25348 183 aa12.03□□□□□ -0.48
KSS1YGR040W TFA1P36100 482 aa11.98□□□□□ -0.49
KSS1YGR040W SPT21P35209 758 aa11.89□□□□□ -0.51
KSS1YGR040W RIM101P33400 625 aa11.58□□□□□ -0.56
KSS1YGR040W YKR023WP36119 530 aaKnown RBP11.58□□□□□ -0.56
KSS1YGR040W CDC27P38042 758 aa11.48□□□□□ -0.57
KSS1YGR040W YGL015CP33199 130 aa11.39□□□□□ -0.59
KSS1YGR040W TFC8Q12308 588 aa11.37□□□□□ -0.59
KSS1YGR040W HOP09932 586 aa11.32□□□□□ -0.6
KSS1YGR040W DCD1P06773 312 aa11.23□□□□□ -0.61
KSS1YGR040W UBP10P53874 792 aaPredicted RBP11.2□□□□□ -0.62
KSS1YGR040W OXP1P28273 1286 aa11.15□□□□□ -0.62
KSS1YGR040W MAP2P38174 421 aaKnown RBP11.07□□□□□ -0.64
KSS1YGR040W YIL055CP40523 627 aaKnown RBP11.04□□□□□ -0.64
KSS1YGR040W PTP3P40048 928 aa11.02□□□□□ -0.65
KSS1YGR040W BCH2P36122 765 aa11□□□□□ -0.65
KSS1YGR040W SCY1P53009 804 aa10.96□□□□□ -0.65
KSS1YGR040W YAH1Q12184 172 aaKnown RBP10.9□□□□□ -0.66
KSS1YGR040W RSM7P47150 247 aa10.88□□□□□ -0.67
KSS1YGR040W SLX5P32828 619 aaKnown RBP10.83□□□□□ -0.68
KSS1YGR040W SSP1P38871 571 aa10.8□□□□□ -0.68
KSS1YGR040W EPS1P40557 701 aa10.79□□□□□ -0.68
KSS1YGR040W YLR271WQ06152 274 aa10.77□□□□□ -0.69
KSS1YGR040W BBC1P47068 1157 aa10.75□□□□□ -0.69
KSS1YGR040W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
KSS1YGR040W AI2P03876 854 aa10.73□□□□□ -0.69
KSS1YGR040W TIF4632P39936 914 aaKnown RBP10.73□□□□□ -0.69
KSS1YGR040W BDF1P35817 686 aa10.72□□□□□ -0.69
KSS1YGR040W TGL3P40308 642 aa10.65□□□□□ -0.7
KSS1YGR040W BUD31P25337 157 aaPredicted RBP10.59□□□□□ -0.71
KSS1YGR040W PSD2P53037 1138 aaKnown RBP10.59□□□□□ -0.71
KSS1YGR040W MGA2P40578 1113 aa10.51□□□□□ -0.73
KSS1YGR040W NSR1P27476 414 aaKnown RBP RIP-Chip data10.43□□□□□ -0.74not detected
KSS1YGR040W CST9Q06032 482 aa10.4□□□□□ -0.74
KSS1YGR040W MRM1P25270 412 aa10.35□□□□□ -0.75
KSS1YGR040W YAP5P40574 245 aa10.29□□□□□ -0.76
KSS1YGR040W MST1P07236 462 aa10.26□□□□□ -0.77
KSS1YGR040W YOR238WQ08634 303 aa10.26□□□□□ -0.77
KSS1YGR040W RTG3P38165 486 aa10.21□□□□□ -0.77
KSS1YGR040W UBP9P39967 754 aa10.18□□□□□ -0.78
KSS1YGR040W YMR1P47147 688 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
KSS1YGR040W VPS29P38759 282 aa10.11□□□□□ -0.79
KSS1YGR040W SGS1P35187 1447 aa10.08□□□□□ -0.8
KSS1YGR040W RCR1P38212 213 aa10.08□□□□□ -0.8
KSS1YGR040W GTT3P39996 337 aa10.04□□□□□ -0.8
KSS1YGR040W RQC2Q12532 1038 aaKnown RBP10.03□□□□□ -0.8
KSS1YGR040W DBP1P24784 617 aaKnown RBP10.01□□□□□ -0.81
KSS1YGR040W STS1P38637 319 aa10.01□□□□□ -0.81
KSS1YGR040W PIB1Q06651 286 aa10□□□□□ -0.81
KSS1YGR040W YBL029C-AQ3E756 94 aa9.97□□□□□ -0.81
KSS1YGR040W RAM2P29703 316 aa9.96□□□□□ -0.82
KSS1YGR040W SIS1P25294 352 aaKnown RBP9.95□□□□□ -0.82
KSS1YGR040W YFR006WP43590 535 aa9.95□□□□□ -0.82
KSS1YGR040W MAK11P20484 414 aaKnown RBP9.93□□□□□ -0.82
KSS1YGR040W VMA1P17255 1071 aaKnown RBP9.91□□□□□ -0.82
KSS1YGR040W VNX1P42839 908 aa9.9□□□□□ -0.82
KSS1YGR040W WSC3Q12215 556 aa9.9□□□□□ -0.82
KSS1YGR040W MSB4Q12317 492 aa9.87□□□□□ -0.83
KSS1YGR040W SAM3Q08986 587 aa9.85□□□□□ -0.83
KSS1YGR040W INO80P53115 1489 aa9.85□□□□□ -0.83
KSS1YGR040W SPP1Q03012 353 aa9.83□□□□□ -0.84
KSS1YGR040W YOL036WQ08206 761 aa9.82□□□□□ -0.84
KSS1YGR040W TIF11P38912 153 aaKnown RBP9.81□□□□□ -0.84
KSS1YGR040W ABP1P15891 592 aaKnown RBP9.78□□□□□ -0.84
KSS1YGR040W EAP1P36041 632 aaKnown RBP9.77□□□□□ -0.85
KSS1YGR040W COQ8P27697 501 aa9.75□□□□□ -0.85
KSS1YGR040W MIF2P35201 549 aa9.75□□□□□ -0.85
KSS1YGR040W SET4P42948 560 aa9.75□□□□□ -0.85
KSS1YGR040W NOP53Q12080 455 aaKnown RBP9.72□□□□□ -0.85
KSS1YGR040W GYP5Q12344 894 aa9.72□□□□□ -0.85
KSS1YGR040W EDS1P38073 919 aa9.71□□□□□ -0.86
KSS1YGR040W ULI1P43604 169 aa9.71□□□□□ -0.86
KSS1YGR040W TCB3Q03640 1545 aaKnown RBP9.71□□□□□ -0.86
KSS1YGR040W PTC3P34221 468 aaKnown RBP9.68□□□□□ -0.86
KSS1YGR040W GRE2Q12068 342 aaKnown RBP9.68□□□□□ -0.86
KSS1YGR040W IOC2Q12072 812 aa9.66□□□□□ -0.86
KSS1YGR040W SET1P38827 1080 aaKnown RBP9.64□□□□□ -0.87
KSS1YGR040W TRP5P00931 707 aaKnown RBP9.63□□□□□ -0.87
KSS1YGR040W HTA1P04911 132 aaKnown RBP9.63□□□□□ -0.87
KSS1YGR040W HTA2P04912 132 aa9.63□□□□□ -0.87
KSS1YGR040W LDB19Q12502 818 aa9.63□□□□□ -0.87
KSS1YGR040W SPA2P23201 1466 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms