RNA–Protein interactions for RNA: YGL221C

NIF3, Transcript of Protein of unknown function, yeastyeast

Gene NIF3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIF3YGL221C INO80P53115 1489 aa17.17■□□□□ 0.34
NIF3YGL221C MON2P48563 1636 aaPredicted RBP17.12■□□□□ 0.33
NIF3YGL221C SGS1P35187 1447 aa16.62■□□□□ 0.25
NIF3YGL221C TCB3Q03640 1545 aaKnown RBP16.53■□□□□ 0.24
NIF3YGL221C SWR1Q05471 1514 aa16.5■□□□□ 0.23
NIF3YGL221C TY1B-DR4Q07793 1604 aa16.44■□□□□ 0.22
NIF3YGL221C DNA2P38859 1522 aa16.39■□□□□ 0.21
NIF3YGL221C KOG1P38873 1557 aa16.09■□□□□ 0.17
NIF3YGL221C HSL1P34244 1518 aa15.99■□□□□ 0.15
NIF3YGL221C SPT6P23615 1451 aaKnown RBP15.97■□□□□ 0.15
NIF3YGL221C SPA2P23201 1466 aaKnown RBP15.84■□□□□ 0.13
NIF3YGL221C HIR3P47171 1648 aa15.67■□□□□ 0.1
NIF3YGL221C RSE1Q04693 1361 aaKnown RBP15.6■□□□□ 0.09
NIF3YGL221C ECM5Q03214 1411 aa15.54■□□□□ 0.08
NIF3YGL221C SSN2P38931 1420 aa15.48■□□□□ 0.07
NIF3YGL221C XRN1P22147 1528 aaKnown RBP15.47■□□□□ 0.07
NIF3YGL221C BUD4P47136 1447 aa15.4■□□□□ 0.06
NIF3YGL221C THO2P53552 1597 aaKnown RBP15.35■□□□□ 0.05
NIF3YGL221C MDS3P53094 1487 aa15.23■□□□□ 0.03
NIF3YGL221C REV3P14284 1504 aa15.17■□□□□ 0.02
NIF3YGL221C TAF2P23255 1407 aa15.13■□□□□ 0.01
NIF3YGL221C PEP1P32319 1579 aa15.1■□□□□ 0.01
NIF3YGL221C ATG2P53855 1592 aa15.07■□□□□ 0
NIF3YGL221C MTC1P47018 478 aaKnown RBP15.06■□□□□ 0
NIF3YGL221C DRS1P32892 752 aaKnown RBP15□□□□□ -0.01
NIF3YGL221C SKI3P17883 1432 aaKnown RBP14.98□□□□□ -0.01
NIF3YGL221C SIN3P22579 1536 aa14.94□□□□□ -0.02
NIF3YGL221C SSK2P53599 1579 aa14.85□□□□□ -0.03
NIF3YGL221C BPT1P14772 1559 aa14.79□□□□□ -0.04
NIF3YGL221C ESP1Q03018 1630 aa14.77□□□□□ -0.05
NIF3YGL221C UFD4P33202 1483 aa14.64□□□□□ -0.07
NIF3YGL221C YPK9Q12697 1472 aa14.59□□□□□ -0.07
NIF3YGL221C SCC2Q04002 1493 aa14.57□□□□□ -0.08
NIF3YGL221C MYO2P19524 1574 aaKnown RBP14.56□□□□□ -0.08
NIF3YGL221C YCF1P39109 1515 aaKnown RBP14.53□□□□□ -0.08
NIF3YGL221C RPO31P04051 1460 aa14.48□□□□□ -0.09
NIF3YGL221C RQC2Q12532 1038 aaKnown RBP14.4□□□□□ -0.1
NIF3YGL221C TY2B-LR1P0C2J3 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-FP0CX63 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-GR2P0CX64 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-CP25384 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-DR2Q03494 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY1B-DR1Q03855 1755 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-DR3Q07791 1770 aaKnown RBP14.34□□□□□ -0.11
NIF3YGL221C TY2B-OR1Q12113 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-DR1Q12472 1770 aa14.34□□□□□ -0.11
NIF3YGL221C TY2B-OR2Q12501 1770 aa14.34□□□□□ -0.11
NIF3YGL221C CHD1P32657 1468 aa14.33□□□□□ -0.12
NIF3YGL221C CDC25P04821 1589 aa14.3□□□□□ -0.12
NIF3YGL221C TOP2P06786 1428 aaKnown RBP14.28□□□□□ -0.12
NIF3YGL221C RKR1Q04781 1562 aa14.26□□□□□ -0.13
NIF3YGL221C POL1P13382 1468 aa14.25□□□□□ -0.13
NIF3YGL221C DNF1P32660 1571 aa14.24□□□□□ -0.13
NIF3YGL221C TY1B-BRQ12193 1756 aa14.24□□□□□ -0.13
NIF3YGL221C TY1B-GR3Q12316 1755 aa14.24□□□□□ -0.13
NIF3YGL221C TY1B-ORQ92393 1755 aa14.24□□□□□ -0.13
NIF3YGL221C STU1P38198 1513 aa14.2□□□□□ -0.14
NIF3YGL221C PAN1P32521 1480 aa14.19□□□□□ -0.14
NIF3YGL221C ESC1Q03661 1658 aaKnown RBP14.17□□□□□ -0.14
NIF3YGL221C TY2B-BQ12491 1770 aa14.17□□□□□ -0.14
NIF3YGL221C TY1B-DR3Q99231 1755 aa14.16□□□□□ -0.14
NIF3YGL221C MMS22Q06164 1454 aa14.13□□□□□ -0.15
NIF3YGL221C YOR1P53049 1477 aa14.12□□□□□ -0.15
NIF3YGL221C TY1B-HO13535 1793 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-DR5P0C2I2 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-DR6P0C2I3 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-LR2P0C2I5 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-LR3P0C2I6 1755 aaKnown RBP14.11□□□□□ -0.15
NIF3YGL221C TY1B-PR1P0C2I9 1755 aaKnown RBP14.11□□□□□ -0.15
NIF3YGL221C TY1B-PR2P0C2J0 1756 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-PR3P0C2J1 1755 aaKnown RBP14.11□□□□□ -0.15
NIF3YGL221C TY1B-JR1P47098 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-ML2Q03434 1755 aaKnown RBP14.11□□□□□ -0.15
NIF3YGL221C TY1B-ER1Q03612 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-ML1Q04711 1755 aaKnown RBP14.11□□□□□ -0.15
NIF3YGL221C TY1B-GR2Q12269 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-OLQ12273 1755 aa14.11□□□□□ -0.15
NIF3YGL221C TY1B-PLQ12414 1755 aaKnown RBP14.11□□□□□ -0.15
NIF3YGL221C SMC4Q12267 1418 aa14.08□□□□□ -0.15
NIF3YGL221C MET5P47169 1442 aa14.06□□□□□ -0.16
NIF3YGL221C RPA190P10964 1664 aaKnown RBP14.05□□□□□ -0.16
NIF3YGL221C SPP41P38904 1435 aa14.01□□□□□ -0.17
NIF3YGL221C TRM732Q03496 1420 aa13.99□□□□□ -0.17
NIF3YGL221C TSC11P40061 1430 aa13.9□□□□□ -0.18
NIF3YGL221C VTH1P40438 1549 aa13.87□□□□□ -0.19
NIF3YGL221C VTH2P40890 1549 aa13.87□□□□□ -0.19
NIF3YGL221C NUP159P40477 1460 aa13.87□□□□□ -0.19
NIF3YGL221C LTE1P07866 1435 aa13.86□□□□□ -0.19
NIF3YGL221C YTA7P40340 1379 aa13.85□□□□□ -0.19
NIF3YGL221C TY1B-JR2P47100 1755 aaKnown RBP13.84□□□□□ -0.19
NIF3YGL221C TY1B-ER2Q03619 1755 aa13.84□□□□□ -0.19
NIF3YGL221C TY1B-MR1Q04214 1755 aa13.84□□□□□ -0.19
NIF3YGL221C TY1B-MR2Q04670 1755 aaKnown RBP13.84□□□□□ -0.19
NIF3YGL221C TY1B-LR1Q12088 1755 aaKnown RBP13.84□□□□□ -0.19
NIF3YGL221C TY1B-NL1Q12112 1755 aa13.84□□□□□ -0.19
NIF3YGL221C TY1B-GR1Q12141 1755 aa13.84□□□□□ -0.19
NIF3YGL221C TY1B-BLQ12490 1755 aa13.84□□□□□ -0.19
NIF3YGL221C YRF1-1P0CX20 1796 aa13.79□□□□□ -0.2
NIF3YGL221C YRF1-5P0CX21 1796 aa13.79□□□□□ -0.2
NIF3YGL221C YRF1-8P0CX22 1796 aa13.79□□□□□ -0.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms