RNA–Protein interactions for RNA: YGL166W

CUP2, Transcript of Copper-binding transcription factor, yeastyeast

Gene CUP2, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP2YGL166W INO80P53115 1489 aa12.83□□□□□ -0.36
CUP2YGL166W MON2P48563 1636 aaPredicted RBP12.77□□□□□ -0.37
CUP2YGL166W SGS1P35187 1447 aa12.3□□□□□ -0.44
CUP2YGL166W TCB3Q03640 1545 aaKnown RBP12.3□□□□□ -0.44
CUP2YGL166W SWR1Q05471 1514 aa12.27□□□□□ -0.44
CUP2YGL166W DNA2P38859 1522 aa12.21□□□□□ -0.45
CUP2YGL166W TY1B-DR4Q07793 1604 aa12.2□□□□□ -0.46
CUP2YGL166W KOG1P38873 1557 aa12.03□□□□□ -0.48
CUP2YGL166W SPT6P23615 1451 aaKnown RBP11.87□□□□□ -0.51
CUP2YGL166W HSL1P34244 1518 aa11.86□□□□□ -0.51
CUP2YGL166W SPA2P23201 1466 aaKnown RBP11.8□□□□□ -0.52
CUP2YGL166W RSE1Q04693 1361 aaKnown RBP11.72□□□□□ -0.53
CUP2YGL166W HIR3P47171 1648 aa11.62□□□□□ -0.55
CUP2YGL166W ECM5Q03214 1411 aa11.57□□□□□ -0.56
CUP2YGL166W XRN1P22147 1528 aaKnown RBP11.47□□□□□ -0.57
CUP2YGL166W BUD4P47136 1447 aa11.47□□□□□ -0.57
CUP2YGL166W THO2P53552 1597 aaKnown RBP11.43□□□□□ -0.58
CUP2YGL166W SSN2P38931 1420 aa11.42□□□□□ -0.58
CUP2YGL166W MDS3P53094 1487 aa11.32□□□□□ -0.6
CUP2YGL166W MTC1P47018 478 aaKnown RBP11.32□□□□□ -0.6
CUP2YGL166W REV3P14284 1504 aa11.25□□□□□ -0.61
CUP2YGL166W TAF2P23255 1407 aa11.21□□□□□ -0.61
CUP2YGL166W PEP1P32319 1579 aa11.2□□□□□ -0.62
CUP2YGL166W ATG2P53855 1592 aa11.18□□□□□ -0.62
CUP2YGL166W SKI3P17883 1432 aaKnown RBP11.14□□□□□ -0.63
CUP2YGL166W DRS1P32892 752 aaKnown RBP11.11□□□□□ -0.63
CUP2YGL166W SIN3P22579 1536 aa11.08□□□□□ -0.64
CUP2YGL166W BPT1P14772 1559 aa11.03□□□□□ -0.64
CUP2YGL166W SSK2P53599 1579 aa11.01□□□□□ -0.65
CUP2YGL166W ESP1Q03018 1630 aa10.95□□□□□ -0.66
CUP2YGL166W UFD4P33202 1483 aa10.88□□□□□ -0.67
CUP2YGL166W YCF1P39109 1515 aaKnown RBP10.83□□□□□ -0.68
CUP2YGL166W MYO2P19524 1574 aaKnown RBP10.82□□□□□ -0.68
CUP2YGL166W YPK9Q12697 1472 aa10.81□□□□□ -0.68
CUP2YGL166W SCC2Q04002 1493 aa10.81□□□□□ -0.68
CUP2YGL166W RQC2Q12532 1038 aaKnown RBP10.76□□□□□ -0.69
CUP2YGL166W RPO31P04051 1460 aa10.73□□□□□ -0.69
CUP2YGL166W CHD1P32657 1468 aa10.66□□□□□ -0.7
CUP2YGL166W CDC25P04821 1589 aa10.63□□□□□ -0.71
CUP2YGL166W TY2B-LR1P0C2J3 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-FP0CX63 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-GR2P0CX64 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-CP25384 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-DR2Q03494 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY1B-DR1Q03855 1755 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-DR3Q07791 1770 aaKnown RBP10.62□□□□□ -0.71
CUP2YGL166W TY2B-OR1Q12113 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-DR1Q12472 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TY2B-OR2Q12501 1770 aa10.62□□□□□ -0.71
CUP2YGL166W TOP2P06786 1428 aaKnown RBP10.59□□□□□ -0.71
CUP2YGL166W ESC1Q03661 1658 aaKnown RBP10.57□□□□□ -0.72
CUP2YGL166W DNF1P32660 1571 aa10.56□□□□□ -0.72
CUP2YGL166W RKR1Q04781 1562 aa10.56□□□□□ -0.72
CUP2YGL166W TY1B-BRQ12193 1756 aa10.56□□□□□ -0.72
CUP2YGL166W TY1B-GR3Q12316 1755 aa10.56□□□□□ -0.72
CUP2YGL166W TY1B-ORQ92393 1755 aa10.56□□□□□ -0.72
CUP2YGL166W PAN1P32521 1480 aa10.55□□□□□ -0.72
CUP2YGL166W POL1P13382 1468 aa10.54□□□□□ -0.72
CUP2YGL166W STU1P38198 1513 aa10.51□□□□□ -0.73
CUP2YGL166W MMS22Q06164 1454 aa10.5□□□□□ -0.73
CUP2YGL166W MET5P47169 1442 aa10.5□□□□□ -0.73
CUP2YGL166W TY2B-BQ12491 1770 aa10.49□□□□□ -0.73
CUP2YGL166W TY1B-DR3Q99231 1755 aa10.48□□□□□ -0.73
CUP2YGL166W TY1B-HO13535 1793 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-DR5P0C2I2 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-DR6P0C2I3 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-LR2P0C2I5 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-LR3P0C2I6 1755 aaKnown RBP10.47□□□□□ -0.73
CUP2YGL166W TY1B-PR1P0C2I9 1755 aaKnown RBP10.47□□□□□ -0.73
CUP2YGL166W TY1B-PR2P0C2J0 1756 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-PR3P0C2J1 1755 aaKnown RBP10.47□□□□□ -0.73
CUP2YGL166W TY1B-JR1P47098 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-ML2Q03434 1755 aaKnown RBP10.47□□□□□ -0.73
CUP2YGL166W TY1B-ER1Q03612 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-ML1Q04711 1755 aaKnown RBP10.47□□□□□ -0.73
CUP2YGL166W TY1B-GR2Q12269 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-OLQ12273 1755 aa10.47□□□□□ -0.73
CUP2YGL166W TY1B-PLQ12414 1755 aaKnown RBP10.47□□□□□ -0.73
CUP2YGL166W YOR1P53049 1477 aa10.46□□□□□ -0.74
CUP2YGL166W RPA190P10964 1664 aaKnown RBP10.44□□□□□ -0.74
CUP2YGL166W SMC4Q12267 1418 aa10.44□□□□□ -0.74
CUP2YGL166W TRM732Q03496 1420 aa10.43□□□□□ -0.74
CUP2YGL166W SPP41P38904 1435 aa10.41□□□□□ -0.74
CUP2YGL166W LTE1P07866 1435 aa10.38□□□□□ -0.75
CUP2YGL166W TSC11P40061 1430 aa10.33□□□□□ -0.76
CUP2YGL166W NUP159P40477 1460 aa10.31□□□□□ -0.76
CUP2YGL166W VTH1P40438 1549 aa10.29□□□□□ -0.76
CUP2YGL166W VTH2P40890 1549 aa10.29□□□□□ -0.76
CUP2YGL166W GEA2P39993 1459 aaKnown RBP10.29□□□□□ -0.76
CUP2YGL166W YTA7P40340 1379 aa10.27□□□□□ -0.76
CUP2YGL166W ITT1Q04638 464 aa10.27□□□□□ -0.77
CUP2YGL166W TY1B-JR2P47100 1755 aaKnown RBP10.26□□□□□ -0.77
CUP2YGL166W TY1B-ER2Q03619 1755 aa10.26□□□□□ -0.77
CUP2YGL166W TY1B-MR1Q04214 1755 aa10.26□□□□□ -0.77
CUP2YGL166W TY1B-MR2Q04670 1755 aaKnown RBP10.26□□□□□ -0.77
CUP2YGL166W TY1B-LR1Q12088 1755 aaKnown RBP10.26□□□□□ -0.77
CUP2YGL166W TY1B-NL1Q12112 1755 aa10.26□□□□□ -0.77
CUP2YGL166W TY1B-GR1Q12141 1755 aa10.26□□□□□ -0.77
CUP2YGL166W TY1B-BLQ12490 1755 aa10.26□□□□□ -0.77
CUP2YGL166W YRF1-1P0CX20 1796 aa10.24□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms