RNA–Protein interactions for RNA: YGL085W

LCL3, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL3, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL3YGL085W MON2P48563 1636 aaPredicted RBP13.71□□□□□ -0.22
LCL3YGL085W INO80P53115 1489 aa13.6□□□□□ -0.23
LCL3YGL085W TCB3Q03640 1545 aaKnown RBP13.15□□□□□ -0.3
LCL3YGL085W TY1B-DR4Q07793 1604 aa13.13□□□□□ -0.31
LCL3YGL085W SWR1Q05471 1514 aa13.11□□□□□ -0.31
LCL3YGL085W SGS1P35187 1447 aa13.04□□□□□ -0.32
LCL3YGL085W DNA2P38859 1522 aa13□□□□□ -0.33
LCL3YGL085W KOG1P38873 1557 aa12.87□□□□□ -0.35
LCL3YGL085W HSL1P34244 1518 aa12.68□□□□□ -0.38
LCL3YGL085W SPT6P23615 1451 aaKnown RBP12.64□□□□□ -0.39
LCL3YGL085W SPA2P23201 1466 aaKnown RBP12.51□□□□□ -0.41
LCL3YGL085W HIR3P47171 1648 aa12.41□□□□□ -0.42
LCL3YGL085W RSE1Q04693 1361 aaKnown RBP12.34□□□□□ -0.43
LCL3YGL085W THO2P53552 1597 aaKnown RBP12.26□□□□□ -0.45
LCL3YGL085W ECM5Q03214 1411 aa12.24□□□□□ -0.45
LCL3YGL085W BUD4P47136 1447 aa12.22□□□□□ -0.45
LCL3YGL085W XRN1P22147 1528 aaKnown RBP12.19□□□□□ -0.46
LCL3YGL085W SSN2P38931 1420 aa12.11□□□□□ -0.47
LCL3YGL085W MDS3P53094 1487 aa12.09□□□□□ -0.47
LCL3YGL085W PEP1P32319 1579 aa12.02□□□□□ -0.49
LCL3YGL085W REV3P14284 1504 aa12□□□□□ -0.49
LCL3YGL085W ATG2P53855 1592 aa11.99□□□□□ -0.49
LCL3YGL085W SIN3P22579 1536 aa11.9□□□□□ -0.5
LCL3YGL085W SSK2P53599 1579 aa11.8□□□□□ -0.52
LCL3YGL085W TAF2P23255 1407 aa11.78□□□□□ -0.52
LCL3YGL085W MTC1P47018 478 aaKnown RBP11.78□□□□□ -0.52
LCL3YGL085W BPT1P14772 1559 aa11.76□□□□□ -0.53
LCL3YGL085W ESP1Q03018 1630 aa11.75□□□□□ -0.53
LCL3YGL085W SKI3P17883 1432 aaKnown RBP11.74□□□□□ -0.53
LCL3YGL085W DRS1P32892 752 aaKnown RBP11.65□□□□□ -0.54
LCL3YGL085W MYO2P19524 1574 aaKnown RBP11.59□□□□□ -0.55
LCL3YGL085W YCF1P39109 1515 aaKnown RBP11.57□□□□□ -0.56
LCL3YGL085W YPK9Q12697 1472 aa11.56□□□□□ -0.56
LCL3YGL085W UFD4P33202 1483 aa11.54□□□□□ -0.56
LCL3YGL085W SCC2Q04002 1493 aa11.53□□□□□ -0.56
LCL3YGL085W RPO31P04051 1460 aa11.45□□□□□ -0.58
LCL3YGL085W TY2B-LR1P0C2J3 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-FP0CX63 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-GR2P0CX64 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-CP25384 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-DR2Q03494 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY1B-DR1Q03855 1755 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-DR3Q07791 1770 aaKnown RBP11.43□□□□□ -0.58
LCL3YGL085W TY2B-OR1Q12113 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-DR1Q12472 1770 aa11.43□□□□□ -0.58
LCL3YGL085W TY2B-OR2Q12501 1770 aa11.43□□□□□ -0.58
LCL3YGL085W CDC25P04821 1589 aa11.37□□□□□ -0.59
LCL3YGL085W TY1B-BRQ12193 1756 aa11.36□□□□□ -0.59
LCL3YGL085W TY1B-GR3Q12316 1755 aa11.36□□□□□ -0.59
LCL3YGL085W TY1B-ORQ92393 1755 aa11.36□□□□□ -0.59
LCL3YGL085W ESC1Q03661 1658 aaKnown RBP11.33□□□□□ -0.6
LCL3YGL085W CHD1P32657 1468 aa11.33□□□□□ -0.6
LCL3YGL085W TY2B-BQ12491 1770 aa11.29□□□□□ -0.6
LCL3YGL085W DNF1P32660 1571 aa11.28□□□□□ -0.6
LCL3YGL085W TOP2P06786 1428 aaKnown RBP11.28□□□□□ -0.6
LCL3YGL085W TY1B-DR3Q99231 1755 aa11.28□□□□□ -0.6
LCL3YGL085W RKR1Q04781 1562 aa11.28□□□□□ -0.6
LCL3YGL085W TY1B-HO13535 1793 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-DR5P0C2I2 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-DR6P0C2I3 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-LR2P0C2I5 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-LR3P0C2I6 1755 aaKnown RBP11.26□□□□□ -0.61
LCL3YGL085W TY1B-PR1P0C2I9 1755 aaKnown RBP11.26□□□□□ -0.61
LCL3YGL085W TY1B-PR2P0C2J0 1756 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-PR3P0C2J1 1755 aaKnown RBP11.26□□□□□ -0.61
LCL3YGL085W TY1B-JR1P47098 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-ML2Q03434 1755 aaKnown RBP11.26□□□□□ -0.61
LCL3YGL085W TY1B-ER1Q03612 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-ML1Q04711 1755 aaKnown RBP11.26□□□□□ -0.61
LCL3YGL085W TY1B-GR2Q12269 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-OLQ12273 1755 aa11.26□□□□□ -0.61
LCL3YGL085W TY1B-PLQ12414 1755 aaKnown RBP11.26□□□□□ -0.61
LCL3YGL085W POL1P13382 1468 aa11.25□□□□□ -0.61
LCL3YGL085W PAN1P32521 1480 aa11.24□□□□□ -0.61
LCL3YGL085W RPA190P10964 1664 aaKnown RBP11.21□□□□□ -0.61
LCL3YGL085W MET5P47169 1442 aa11.21□□□□□ -0.61
LCL3YGL085W RQC2Q12532 1038 aaKnown RBP11.18□□□□□ -0.62
LCL3YGL085W MMS22Q06164 1454 aa11.17□□□□□ -0.62
LCL3YGL085W YOR1P53049 1477 aa11.15□□□□□ -0.62
LCL3YGL085W STU1P38198 1513 aa11.14□□□□□ -0.63
LCL3YGL085W SMC4Q12267 1418 aa11.13□□□□□ -0.63
LCL3YGL085W LTE1P07866 1435 aa11.05□□□□□ -0.64
LCL3YGL085W SPP41P38904 1435 aa11.05□□□□□ -0.64
LCL3YGL085W TRM732Q03496 1420 aa11.05□□□□□ -0.64
LCL3YGL085W TY1B-JR2P47100 1755 aaKnown RBP11.05□□□□□ -0.64
LCL3YGL085W TY1B-ER2Q03619 1755 aa11.05□□□□□ -0.64
LCL3YGL085W TY1B-MR1Q04214 1755 aa11.05□□□□□ -0.64
LCL3YGL085W TY1B-MR2Q04670 1755 aaKnown RBP11.05□□□□□ -0.64
LCL3YGL085W TY1B-LR1Q12088 1755 aaKnown RBP11.05□□□□□ -0.64
LCL3YGL085W TY1B-NL1Q12112 1755 aa11.05□□□□□ -0.64
LCL3YGL085W TY1B-GR1Q12141 1755 aa11.05□□□□□ -0.64
LCL3YGL085W TY1B-BLQ12490 1755 aa11.05□□□□□ -0.64
LCL3YGL085W NTE1Q04958 1679 aa11.01□□□□□ -0.65
LCL3YGL085W YRF1-1P0CX20 1796 aa10.99□□□□□ -0.65
LCL3YGL085W YRF1-5P0CX21 1796 aa10.99□□□□□ -0.65
LCL3YGL085W YRF1-8P0CX22 1796 aa10.99□□□□□ -0.65
LCL3YGL085W VTH1P40438 1549 aa10.99□□□□□ -0.65
LCL3YGL085W VTH2P40890 1549 aa10.99□□□□□ -0.65
LCL3YGL085W BNI1P41832 1953 aa10.96□□□□□ -0.65
LCL3YGL085W TSC11P40061 1430 aa10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms