RNA–Protein interactions for RNA: YGL004C

RPN14, Transcript of Assembly chaperone for the 19S proteasome regulatory particle base, yeastyeast

Gene RPN14, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN14YGL004C SGS1P35187 1447 aa14.97□□□□□ -0.01
RPN14YGL004C INO80P53115 1489 aa14.77□□□□□ -0.04
RPN14YGL004C TCB3Q03640 1545 aaKnown RBP14.55□□□□□ -0.08
RPN14YGL004C SPA2P23201 1466 aaKnown RBP14.38□□□□□ -0.11
RPN14YGL004C TY1B-DR4Q07793 1604 aa14.27□□□□□ -0.12
RPN14YGL004C SSN2P38931 1420 aa14.27□□□□□ -0.12
RPN14YGL004C MON2P48563 1636 aaPredicted RBP14.23□□□□□ -0.13
RPN14YGL004C HSL1P34244 1518 aa14.02□□□□□ -0.16
RPN14YGL004C SPT6P23615 1451 aaKnown RBP14.02□□□□□ -0.16
RPN14YGL004C SWR1Q05471 1514 aa13.96□□□□□ -0.17
RPN14YGL004C DRS1P32892 752 aaKnown RBP13.95□□□□□ -0.18
RPN14YGL004C HIR3P47171 1648 aa13.78□□□□□ -0.2
RPN14YGL004C MTC1P47018 478 aaKnown RBP13.75□□□□□ -0.21
RPN14YGL004C XRN1P22147 1528 aaKnown RBP13.69□□□□□ -0.22
RPN14YGL004C KOG1P38873 1557 aa13.59□□□□□ -0.23
RPN14YGL004C DNA2P38859 1522 aa13.54□□□□□ -0.24
RPN14YGL004C REV3P14284 1504 aa13.51□□□□□ -0.25
RPN14YGL004C THO2P53552 1597 aaKnown RBP13.46□□□□□ -0.25
RPN14YGL004C SIN3P22579 1536 aa13.44□□□□□ -0.26
RPN14YGL004C BUD4P47136 1447 aa13.36□□□□□ -0.27
RPN14YGL004C SSK2P53599 1579 aa13.34□□□□□ -0.27
RPN14YGL004C TAF2P23255 1407 aa13.3□□□□□ -0.28
RPN14YGL004C ECM5Q03214 1411 aa13.27□□□□□ -0.29
RPN14YGL004C MYO2P19524 1574 aaKnown RBP13.26□□□□□ -0.29
RPN14YGL004C ESP1Q03018 1630 aa13.23□□□□□ -0.29
RPN14YGL004C ATG2P53855 1592 aa13.16□□□□□ -0.3
RPN14YGL004C SKI3P17883 1432 aaKnown RBP13.15□□□□□ -0.3
RPN14YGL004C MDS3P53094 1487 aa13.08□□□□□ -0.32
RPN14YGL004C YPK9Q12697 1472 aa13.06□□□□□ -0.32
RPN14YGL004C PEP1P32319 1579 aa13.03□□□□□ -0.32
RPN14YGL004C POL1P13382 1468 aa13□□□□□ -0.33
RPN14YGL004C CHD1P32657 1468 aa12.93□□□□□ -0.34
RPN14YGL004C YTA7P40340 1379 aa12.93□□□□□ -0.34
RPN14YGL004C STU1P38198 1513 aa12.92□□□□□ -0.34
RPN14YGL004C SCC2Q04002 1493 aa12.91□□□□□ -0.34
RPN14YGL004C RPO31P04051 1460 aa12.86□□□□□ -0.35
RPN14YGL004C RKR1Q04781 1562 aa12.86□□□□□ -0.35
RPN14YGL004C MMS22Q06164 1454 aa12.83□□□□□ -0.36
RPN14YGL004C UFD4P33202 1483 aa12.82□□□□□ -0.36
RPN14YGL004C YOR1P53049 1477 aa12.81□□□□□ -0.36
RPN14YGL004C TOP2P06786 1428 aaKnown RBP12.8□□□□□ -0.36
RPN14YGL004C SMC4Q12267 1418 aa12.76□□□□□ -0.37
RPN14YGL004C MYO4P32492 1471 aa12.75□□□□□ -0.37
RPN14YGL004C YCF1P39109 1515 aaKnown RBP12.73□□□□□ -0.37
RPN14YGL004C BPT1P14772 1559 aa12.69□□□□□ -0.38
RPN14YGL004C TAF7Q05021 590 aa12.67□□□□□ -0.38
RPN14YGL004C SAS10Q12136 610 aaPredicted RBP12.67□□□□□ -0.38
RPN14YGL004C TY2B-LR1P0C2J3 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-FP0CX63 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-GR2P0CX64 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-CP25384 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-DR2Q03494 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY1B-DR1Q03855 1755 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-DR3Q07791 1770 aaKnown RBP12.64□□□□□ -0.39
RPN14YGL004C TY2B-OR1Q12113 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-DR1Q12472 1770 aa12.64□□□□□ -0.39
RPN14YGL004C TY2B-OR2Q12501 1770 aa12.64□□□□□ -0.39
RPN14YGL004C RSE1Q04693 1361 aaKnown RBP12.58□□□□□ -0.4
RPN14YGL004C RQC2Q12532 1038 aaKnown RBP12.58□□□□□ -0.4
RPN14YGL004C TY1B-DR3Q99231 1755 aa12.56□□□□□ -0.4
RPN14YGL004C TY2B-BQ12491 1770 aa12.53□□□□□ -0.4
RPN14YGL004C STH1P32597 1359 aa12.53□□□□□ -0.4
RPN14YGL004C SPP41P38904 1435 aa12.52□□□□□ -0.41
RPN14YGL004C SNQ2P32568 1501 aaKnown RBP12.51□□□□□ -0.41
RPN14YGL004C CDC25P04821 1589 aa12.48□□□□□ -0.41
RPN14YGL004C TY1B-HO13535 1793 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-DR5P0C2I2 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-DR6P0C2I3 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-LR2P0C2I5 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-LR3P0C2I6 1755 aaKnown RBP12.46□□□□□ -0.42
RPN14YGL004C TY1B-PR1P0C2I9 1755 aaKnown RBP12.46□□□□□ -0.42
RPN14YGL004C TY1B-PR2P0C2J0 1756 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-PR3P0C2J1 1755 aaKnown RBP12.46□□□□□ -0.42
RPN14YGL004C TY1B-JR1P47098 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-ML2Q03434 1755 aaKnown RBP12.46□□□□□ -0.42
RPN14YGL004C TY1B-ER1Q03612 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-ML1Q04711 1755 aaKnown RBP12.46□□□□□ -0.42
RPN14YGL004C TY1B-GR2Q12269 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-OLQ12273 1755 aa12.46□□□□□ -0.42
RPN14YGL004C TY1B-PLQ12414 1755 aaKnown RBP12.46□□□□□ -0.42
RPN14YGL004C TY1B-BRQ12193 1756 aa12.45□□□□□ -0.42
RPN14YGL004C TY1B-GR3Q12316 1755 aa12.45□□□□□ -0.42
RPN14YGL004C TY1B-ORQ92393 1755 aa12.45□□□□□ -0.42
RPN14YGL004C PAN1P32521 1480 aa12.45□□□□□ -0.42
RPN14YGL004C MLP2P40457 1679 aa12.42□□□□□ -0.42
RPN14YGL004C TSC11P40061 1430 aa12.42□□□□□ -0.42
RPN14YGL004C VTH1P40438 1549 aa12.41□□□□□ -0.42
RPN14YGL004C VTH2P40890 1549 aa12.41□□□□□ -0.42
RPN14YGL004C PDR15Q04182 1529 aaKnown RBP12.37□□□□□ -0.43
RPN14YGL004C TRM732Q03496 1420 aa12.36□□□□□ -0.43
RPN14YGL004C IFH1P39520 1085 aa12.34□□□□□ -0.43
RPN14YGL004C IKI3Q06706 1349 aaKnown RBP12.34□□□□□ -0.43
RPN14YGL004C ESC1Q03661 1658 aaKnown RBP12.33□□□□□ -0.44
RPN14YGL004C GEA1P47102 1408 aaPredicted RBP12.3□□□□□ -0.44
RPN14YGL004C RTT106P40161 455 aa12.29□□□□□ -0.44
RPN14YGL004C ULS1Q08562 1619 aa12.28□□□□□ -0.44
RPN14YGL004C SNT2P53127 1403 aa12.28□□□□□ -0.44
RPN14YGL004C TY1B-JR2P47100 1755 aaKnown RBP12.25□□□□□ -0.45
RPN14YGL004C TY1B-ER2Q03619 1755 aa12.25□□□□□ -0.45
RPN14YGL004C TY1B-MR1Q04214 1755 aa12.25□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms