RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W MON2P48563 1636 aaPredicted RBP14.27□□□□□ -0.12
PDA1YER178W INO80P53115 1489 aa14.06□□□□□ -0.16
PDA1YER178W TY1B-DR4Q07793 1604 aa13.84□□□□□ -0.19
PDA1YER178W SGS1P35187 1447 aa13.8□□□□□ -0.2
PDA1YER178W TCB3Q03640 1545 aaKnown RBP13.75□□□□□ -0.21
PDA1YER178W SWR1Q05471 1514 aa13.73□□□□□ -0.21
PDA1YER178W DNA2P38859 1522 aa13.54□□□□□ -0.24
PDA1YER178W HSL1P34244 1518 aa13.4□□□□□ -0.26
PDA1YER178W KOG1P38873 1557 aa13.33□□□□□ -0.28
PDA1YER178W SPT6P23615 1451 aaKnown RBP13.3□□□□□ -0.28
PDA1YER178W HIR3P47171 1648 aa13.11□□□□□ -0.31
PDA1YER178W SPA2P23201 1466 aaKnown RBP13.09□□□□□ -0.31
PDA1YER178W SSN2P38931 1420 aa12.95□□□□□ -0.34
PDA1YER178W XRN1P22147 1528 aaKnown RBP12.87□□□□□ -0.35
PDA1YER178W THO2P53552 1597 aaKnown RBP12.83□□□□□ -0.36
PDA1YER178W ECM5Q03214 1411 aa12.79□□□□□ -0.36
PDA1YER178W BUD4P47136 1447 aa12.76□□□□□ -0.37
PDA1YER178W REV3P14284 1504 aa12.71□□□□□ -0.38
PDA1YER178W MDS3P53094 1487 aa12.67□□□□□ -0.38
PDA1YER178W PEP1P32319 1579 aa12.66□□□□□ -0.38
PDA1YER178W ATG2P53855 1592 aa12.66□□□□□ -0.38
PDA1YER178W RSE1Q04693 1361 aaKnown RBP12.62□□□□□ -0.39
PDA1YER178W SIN3P22579 1536 aa12.59□□□□□ -0.39
PDA1YER178W SSK2P53599 1579 aa12.52□□□□□ -0.41
PDA1YER178W TAF2P23255 1407 aa12.46□□□□□ -0.41
PDA1YER178W ESP1Q03018 1630 aa12.45□□□□□ -0.42
PDA1YER178W SKI3P17883 1432 aaKnown RBP12.33□□□□□ -0.44
PDA1YER178W DRS1P32892 752 aaKnown RBP12.32□□□□□ -0.44
PDA1YER178W BPT1P14772 1559 aa12.27□□□□□ -0.44
PDA1YER178W MYO2P19524 1574 aaKnown RBP12.22□□□□□ -0.45
PDA1YER178W SCC2Q04002 1493 aa12.19□□□□□ -0.46
PDA1YER178W YPK9Q12697 1472 aa12.19□□□□□ -0.46
PDA1YER178W TY2B-LR1P0C2J3 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-FP0CX63 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-GR2P0CX64 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-CP25384 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-DR2Q03494 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY1B-DR1Q03855 1755 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-DR3Q07791 1770 aaKnown RBP12.16□□□□□ -0.46
PDA1YER178W TY2B-OR1Q12113 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-DR1Q12472 1770 aa12.16□□□□□ -0.46
PDA1YER178W TY2B-OR2Q12501 1770 aa12.16□□□□□ -0.46
PDA1YER178W UFD4P33202 1483 aa12.13□□□□□ -0.47
PDA1YER178W RPO31P04051 1460 aa12.09□□□□□ -0.47
PDA1YER178W YCF1P39109 1515 aaKnown RBP12.08□□□□□ -0.48
PDA1YER178W MTC1P47018 478 aaKnown RBP12.08□□□□□ -0.48
PDA1YER178W TY1B-BRQ12193 1756 aa12.06□□□□□ -0.48
PDA1YER178W TY1B-GR3Q12316 1755 aa12.06□□□□□ -0.48
PDA1YER178W TY1B-ORQ92393 1755 aa12.06□□□□□ -0.48
PDA1YER178W TY1B-DR3Q99231 1755 aa12.03□□□□□ -0.48
PDA1YER178W TY2B-BQ12491 1770 aa12.02□□□□□ -0.49
PDA1YER178W TY1B-HO13535 1793 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-DR5P0C2I2 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-DR6P0C2I3 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-LR2P0C2I5 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-LR3P0C2I6 1755 aaKnown RBP11.97□□□□□ -0.49
PDA1YER178W TY1B-PR1P0C2I9 1755 aaKnown RBP11.97□□□□□ -0.49
PDA1YER178W TY1B-PR2P0C2J0 1756 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-PR3P0C2J1 1755 aaKnown RBP11.97□□□□□ -0.49
PDA1YER178W TY1B-JR1P47098 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-ML2Q03434 1755 aaKnown RBP11.97□□□□□ -0.49
PDA1YER178W TY1B-ER1Q03612 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-ML1Q04711 1755 aaKnown RBP11.97□□□□□ -0.49
PDA1YER178W TY1B-GR2Q12269 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-OLQ12273 1755 aa11.97□□□□□ -0.49
PDA1YER178W TY1B-PLQ12414 1755 aaKnown RBP11.97□□□□□ -0.49
PDA1YER178W CDC25P04821 1589 aa11.95□□□□□ -0.5
PDA1YER178W RKR1Q04781 1562 aa11.95□□□□□ -0.5
PDA1YER178W POL1P13382 1468 aa11.93□□□□□ -0.5
PDA1YER178W ESC1Q03661 1658 aaKnown RBP11.91□□□□□ -0.5
PDA1YER178W DNF1P32660 1571 aa11.9□□□□□ -0.5
PDA1YER178W TOP2P06786 1428 aaKnown RBP11.88□□□□□ -0.51
PDA1YER178W CHD1P32657 1468 aa11.88□□□□□ -0.51
PDA1YER178W STU1P38198 1513 aa11.85□□□□□ -0.51
PDA1YER178W RPA190P10964 1664 aaKnown RBP11.82□□□□□ -0.52
PDA1YER178W YOR1P53049 1477 aa11.81□□□□□ -0.52
PDA1YER178W PAN1P32521 1480 aa11.78□□□□□ -0.52
PDA1YER178W TY1B-JR2P47100 1755 aaKnown RBP11.74□□□□□ -0.53
PDA1YER178W TY1B-ER2Q03619 1755 aa11.74□□□□□ -0.53
PDA1YER178W TY1B-MR1Q04214 1755 aa11.74□□□□□ -0.53
PDA1YER178W TY1B-MR2Q04670 1755 aaKnown RBP11.74□□□□□ -0.53
PDA1YER178W TY1B-LR1Q12088 1755 aaKnown RBP11.74□□□□□ -0.53
PDA1YER178W TY1B-NL1Q12112 1755 aa11.74□□□□□ -0.53
PDA1YER178W TY1B-GR1Q12141 1755 aa11.74□□□□□ -0.53
PDA1YER178W TY1B-BLQ12490 1755 aa11.74□□□□□ -0.53
PDA1YER178W MMS22Q06164 1454 aa11.73□□□□□ -0.53
PDA1YER178W SMC4Q12267 1418 aa11.73□□□□□ -0.53
PDA1YER178W RQC2Q12532 1038 aaKnown RBP11.65□□□□□ -0.54
PDA1YER178W YRF1-1P0CX20 1796 aa11.63□□□□□ -0.55
PDA1YER178W YRF1-5P0CX21 1796 aa11.63□□□□□ -0.55
PDA1YER178W YRF1-8P0CX22 1796 aa11.63□□□□□ -0.55
PDA1YER178W NTE1Q04958 1679 aa11.62□□□□□ -0.55
PDA1YER178W SPP41P38904 1435 aa11.62□□□□□ -0.55
PDA1YER178W MET5P47169 1442 aa11.6□□□□□ -0.55
PDA1YER178W VTH1P40438 1549 aa11.6□□□□□ -0.55
PDA1YER178W VTH2P40890 1549 aa11.6□□□□□ -0.55
PDA1YER178W RPO21P04050 1733 aaKnown RBP11.57□□□□□ -0.56
PDA1YER178W MYO4P32492 1471 aa11.55□□□□□ -0.56
PDA1YER178W TSC11P40061 1430 aa11.54□□□□□ -0.56
PDA1YER178W TRM732Q03496 1420 aa11.53□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms