RNA–Protein interactions for RNA: YER110C

KAP123, Transcript of Karyopherin beta, yeast

Gene KAP123, Length 3,342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAP123	YER110C	DRS1	P32892	752 aa	Known RBP	6.32	□□□□□ -1.4
KAP123	YER110C	MTC1	P47018	478 aa	Known RBP	5.99	□□□□□ -1.45
KAP123	YER110C	BFR2	Q06631	534 aa	Known RBP	5.56	□□□□□ -1.52
KAP123	YER110C	TFA1	P36100	482 aa		5.41	□□□□□ -1.54
KAP123	YER110C	MON2	P48563	1636 aa	Predicted RBP	5.4	□□□□□ -1.55
KAP123	YER110C	AVT3	P36062	692 aa		5.32	□□□□□ -1.56
KAP123	YER110C	DIP2	Q12220	943 aa	Predicted RBP	5.29	□□□□□ -1.56
KAP123	YER110C	INO80	P53115	1489 aa		5.28	□□□□□ -1.56
KAP123	YER110C	RSE1	Q04693	1361 aa	Known RBP	5.08	□□□□□ -1.6
KAP123	YER110C	KOG1	P38873	1557 aa		5.05	□□□□□ -1.6
KAP123	YER110C	DNA2	P38859	1522 aa		5	□□□□□ -1.61
KAP123	YER110C	SWR1	Q05471	1514 aa		4.88	□□□□□ -1.63
KAP123	YER110C	SPA2	P23201	1466 aa	Known RBP	4.87	□□□□□ -1.63
KAP123	YER110C	RPG1	P38249	964 aa	Known RBP	4.76	□□□□□ -1.65
KAP123	YER110C	MIF2	P35201	549 aa		4.74	□□□□□ -1.65
KAP123	YER110C	TCB3	Q03640	1545 aa	Known RBP	4.74	□□□□□ -1.65
KAP123	YER110C	ISW2	Q08773	1120 aa		4.73	□□□□□ -1.65
KAP123	YER110C	RPL17A	P05740	184 aa	Known RBP	4.7	□□□□□ -1.66
KAP123	YER110C	RPL17B	P46990	184 aa	Known RBP	4.7	□□□□□ -1.66
KAP123	YER110C	TY1B-DR4	Q07793	1604 aa		4.68	□□□□□ -1.66
KAP123	YER110C	PRI1	P10363	409 aa		4.67	□□□□□ -1.66
KAP123	YER110C	DMA1	P38823	416 aa		4.64	□□□□□ -1.67
KAP123	YER110C	RQC2	Q12532	1038 aa	Known RBP	4.63	□□□□□ -1.67
KAP123	YER110C	PTP3	P40048	928 aa		4.63	□□□□□ -1.67
KAP123	YER110C	FAP1	P53971	965 aa		4.61	□□□□□ -1.67
KAP123	YER110C	SPT21	P35209	758 aa		4.59	□□□□□ -1.67
KAP123	YER110C	REB1	P21538	810 aa		4.57	□□□□□ -1.68
KAP123	YER110C	RIM101	P33400	625 aa		4.55	□□□□□ -1.68
KAP123	YER110C	THO2	P53552	1597 aa	Known RBP	4.55	□□□□□ -1.68
KAP123	YER110C	REV3	P14284	1504 aa		4.51	□□□□□ -1.69
KAP123	YER110C	AAD16	Q02895	342 aa		4.51	□□□□□ -1.69
KAP123	YER110C	TSR3	Q12094	313 aa	Known RBP	4.5	□□□□□ -1.69
KAP123	YER110C	OXP1	P28273	1286 aa		4.49	□□□□□ -1.69
KAP123	YER110C	SSP1	P38871	571 aa		4.44	□□□□□ -1.7
KAP123	YER110C	BUD4	P47136	1447 aa		4.44	□□□□□ -1.7
KAP123	YER110C	YAH1	Q12184	172 aa	Known RBP	4.43	□□□□□ -1.7
KAP123	YER110C	MDS3	P53094	1487 aa		4.43	□□□□□ -1.7
KAP123	YER110C	YKR023W	P36119	530 aa	Known RBP	4.41	□□□□□ -1.7
KAP123	YER110C	YFR006W	P43590	535 aa		4.41	□□□□□ -1.7
KAP123	YER110C	YLR271W	Q06152	274 aa		4.41	□□□□□ -1.7
KAP123	YER110C	ECM5	Q03214	1411 aa		4.4	□□□□□ -1.71
KAP123	YER110C	PEP1	P32319	1579 aa		4.4	□□□□□ -1.71
KAP123	YER110C	SPT6	P23615	1451 aa	Known RBP	4.38	□□□□□ -1.71
KAP123	YER110C	HSL1	P34244	1518 aa		4.37	□□□□□ -1.71
KAP123	YER110C	DCD1	P06773	312 aa		4.36	□□□□□ -1.71
KAP123	YER110C	BPT1	P14772	1559 aa		4.36	□□□□□ -1.71
KAP123	YER110C	LTE1	P07866	1435 aa		4.36	□□□□□ -1.71
KAP123	YER110C	MYO2	P19524	1574 aa	Known RBP	4.36	□□□□□ -1.71
KAP123	YER110C	HO	P09932	586 aa		4.33	□□□□□ -1.72
KAP123	YER110C	SSK2	P53599	1579 aa		4.33	□□□□□ -1.72
KAP123	YER110C	DNF1	P32660	1571 aa		4.33	□□□□□ -1.72
KAP123	YER110C	PRY3	P47033	881 aa		4.32	□□□□□ -1.72
KAP123	YER110C	CST9	Q06032	482 aa		4.32	□□□□□ -1.72
KAP123	YER110C	MET5	P47169	1442 aa		4.31	□□□□□ -1.72
KAP123	YER110C	YCF1	P39109	1515 aa	Known RBP	4.3	□□□□□ -1.72
KAP123	YER110C	YIL055C	P40523	627 aa	Known RBP	4.29	□□□□□ -1.72
KAP123	YER110C	TAF7	Q05021	590 aa		4.28	□□□□□ -1.72
KAP123	YER110C	TFC8	Q12308	588 aa		4.28	□□□□□ -1.72
KAP123	YER110C	ESC1	Q03661	1658 aa	Known RBP	4.28	□□□□□ -1.72
KAP123	YER110C	CDC27	P38042	758 aa		4.26	□□□□□ -1.73
KAP123	YER110C	HIR3	P47171	1648 aa		4.25	□□□□□ -1.73
KAP123	YER110C	RSM7	P47150	247 aa		4.25	□□□□□ -1.73
KAP123	YER110C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
KAP123	YER110C	YCK3	P39962	524 aa		4.25	□□□□□ -1.73
KAP123	YER110C	MGA2	P40578	1113 aa		4.24	□□□□□ -1.73
KAP123	YER110C	IRC20	Q06554	1556 aa		4.23	□□□□□ -1.73
KAP123	YER110C	GEA2	P39993	1459 aa	Known RBP	4.23	□□□□□ -1.73
KAP123	YER110C	SAS10	Q12136	610 aa	Predicted RBP	4.23	□□□□□ -1.73
KAP123	YER110C	RPA190	P10964	1664 aa	Known RBP	4.23	□□□□□ -1.73
KAP123	YER110C	PSD2	P53037	1138 aa	Known RBP	4.22	□□□□□ -1.73
KAP123	YER110C	LEO1	P38439	464 aa		4.21	□□□□□ -1.73
KAP123	YER110C	CDC25	P04821	1589 aa		4.21	□□□□□ -1.74
KAP123	YER110C	ABP1	P15891	592 aa	Known RBP	4.2	□□□□□ -1.74
KAP123	YER110C	BCH2	P36122	765 aa		4.2	□□□□□ -1.74
KAP123	YER110C	AI2	P03876	854 aa		4.19	□□□□□ -1.74
KAP123	YER110C	MRPL32	P25348	183 aa		4.19	□□□□□ -1.74
KAP123	YER110C	RCR1	P38212	213 aa		4.19	□□□□□ -1.74
KAP123	YER110C	SGS1	P35187	1447 aa		4.19	□□□□□ -1.74
KAP123	YER110C	ATG2	P53855	1592 aa		4.18	□□□□□ -1.74
KAP123	YER110C	BNI1	P41832	1953 aa		4.17	□□□□□ -1.74
KAP123	YER110C	RAM2	P29703	316 aa		4.15	□□□□□ -1.74
KAP123	YER110C	MMS1	Q06211	1407 aa		4.14	□□□□□ -1.75
KAP123	YER110C	RKR1	Q04781	1562 aa		4.14	□□□□□ -1.75
KAP123	YER110C	TAF2	P23255	1407 aa		4.14	□□□□□ -1.75
KAP123	YER110C	RPO31	P04051	1460 aa		4.14	□□□□□ -1.75
KAP123	YER110C	LEU3	P08638	886 aa		4.13	□□□□□ -1.75
KAP123	YER110C	YOR093C	Q12275	1648 aa		4.12	□□□□□ -1.75
KAP123	YER110C	EPS1	P40557	701 aa		4.1	□□□□□ -1.75
KAP123	YER110C	MRM1	P25270	412 aa		4.1	□□□□□ -1.75
KAP123	YER110C	BDF1	P35817	686 aa		4.09	□□□□□ -1.75
KAP123	YER110C	DRS2	P39524	1355 aa		4.07	□□□□□ -1.76
KAP123	YER110C	DMA2	P53924	522 aa		4.07	□□□□□ -1.76
KAP123	YER110C	SIN3	P22579	1536 aa		4.07	□□□□□ -1.76
KAP123	YER110C	SET1	P38827	1080 aa	Known RBP	4.06	□□□□□ -1.76
KAP123	YER110C	DNF2	Q12675	1612 aa		4.06	□□□□□ -1.76
KAP123	YER110C	BBC1	P47068	1157 aa		4.05	□□□□□ -1.76
KAP123	YER110C	ESP1	Q03018	1630 aa		4.05	□□□□□ -1.76
KAP123	YER110C	VPS70	P47161	811 aa		4.04	□□□□□ -1.76
KAP123	YER110C	SCY1	P53009	804 aa		4.04	□□□□□ -1.76
KAP123	YER110C	XRN1	P22147	1528 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms