RNA–Protein interactions for RNA: YER072W

VTC1, Transcript of Subunit of the vacuolar transporter chaperone (VTC) complex, yeastyeast

Gene VTC1, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTC1YER072W FAP1P53971 965 aa10.24□□□□□ -0.77
VTC1YER072W MTC1P47018 478 aaKnown RBP10.23□□□□□ -0.77
VTC1YER072W PRY3P47033 881 aa9.65□□□□□ -0.86
VTC1YER072W AAD16Q02895 342 aa9.19□□□□□ -0.94
VTC1YER072W PRI1P10363 409 aa9.13□□□□□ -0.95
VTC1YER072W YCK3P39962 524 aa9.09□□□□□ -0.95
VTC1YER072W HAA1Q12753 694 aaKnown RBP8.99□□□□□ -0.97
VTC1YER072W ISW2Q08773 1120 aa8.68□□□□□ -1.02
VTC1YER072W DRS1P32892 752 aaKnown RBP8.66□□□□□ -1.02
VTC1YER072W RPG1P38249 964 aaKnown RBP8.62□□□□□ -1.03
VTC1YER072W TSR3Q12094 313 aaKnown RBP8.59□□□□□ -1.03
VTC1YER072W MRPL32P25348 183 aa8.25□□□□□ -1.09
VTC1YER072W YGL015CP33199 130 aa8.16□□□□□ -1.1
VTC1YER072W DIP2Q12220 943 aaPredicted RBP7.91□□□□□ -1.14
VTC1YER072W RSE1Q04693 1361 aaKnown RBP7.9□□□□□ -1.14
VTC1YER072W BUD31P25337 157 aaPredicted RBP7.87□□□□□ -1.15
VTC1YER072W REB1P21538 810 aa7.77□□□□□ -1.17
VTC1YER072W RPL17AP05740 184 aaKnown RBP7.72□□□□□ -1.17
VTC1YER072W RPL17BP46990 184 aaKnown RBP7.72□□□□□ -1.17
VTC1YER072W CDC27P38042 758 aa7.68□□□□□ -1.18
VTC1YER072W UBP10P53874 792 aaPredicted RBP7.57□□□□□ -1.2
VTC1YER072W MAP2P38174 421 aaKnown RBP7.55□□□□□ -1.2
VTC1YER072W YKR023WP36119 530 aaKnown RBP7.44□□□□□ -1.22
VTC1YER072W SIS1P25294 352 aaKnown RBP7.42□□□□□ -1.22
VTC1YER072W AVT3P36062 692 aa7.37□□□□□ -1.23
VTC1YER072W SPT21P35209 758 aa7.31□□□□□ -1.24
VTC1YER072W UBP9P39967 754 aa7.31□□□□□ -1.24
VTC1YER072W DCD1P06773 312 aa7.3□□□□□ -1.24
VTC1YER072W HOP09932 586 aa7.3□□□□□ -1.24
VTC1YER072W TFC8Q12308 588 aa7.29□□□□□ -1.24
VTC1YER072W TIF4632P39936 914 aaKnown RBP7.27□□□□□ -1.25
VTC1YER072W TGL3P40308 642 aa7.25□□□□□ -1.25
VTC1YER072W SCY1P53009 804 aa7.24□□□□□ -1.25
VTC1YER072W SLX5P32828 619 aaKnown RBP7.19□□□□□ -1.26
VTC1YER072W BCH2P36122 765 aa7.02□□□□□ -1.29
VTC1YER072W YBL029C-AQ3E756 94 aa6.88□□□□□ -1.31
VTC1YER072W RIM101P33400 625 aa6.86□□□□□ -1.31
VTC1YER072W MST1P07236 462 aa6.84□□□□□ -1.31
VTC1YER072W BDF1P35817 686 aa6.78□□□□□ -1.32
VTC1YER072W EPS1P40557 701 aa6.78□□□□□ -1.32
VTC1YER072W YOR238WQ08634 303 aa6.78□□□□□ -1.32
VTC1YER072W VNX1P42839 908 aa6.77□□□□□ -1.33
VTC1YER072W BFR2Q06631 534 aaKnown RBP6.77□□□□□ -1.33
VTC1YER072W SPP1Q03012 353 aa6.7□□□□□ -1.34
VTC1YER072W NSR1P27476 414 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
VTC1YER072W YJL171CP46992 396 aa6.65□□□□□ -1.34
VTC1YER072W WSC3Q12215 556 aa6.65□□□□□ -1.34
VTC1YER072W AIR2Q12476 344 aaKnown RBP6.65□□□□□ -1.34
VTC1YER072W FKH1P40466 484 aa6.61□□□□□ -1.35
VTC1YER072W OXP1P28273 1286 aa6.6□□□□□ -1.35
VTC1YER072W YAP5P40574 245 aa6.6□□□□□ -1.35
VTC1YER072W TIF11P38912 153 aaKnown RBP6.57□□□□□ -1.36
VTC1YER072W PTP3P40048 928 aa6.54□□□□□ -1.36
VTC1YER072W YIL055CP40523 627 aaKnown RBP6.51□□□□□ -1.37
VTC1YER072W GTT3P39996 337 aa6.49□□□□□ -1.37
VTC1YER072W BBC1P47068 1157 aa6.49□□□□□ -1.37
VTC1YER072W LDB19Q12502 818 aa6.49□□□□□ -1.37
VTC1YER072W BMT6Q12291 365 aa6.48□□□□□ -1.37
VTC1YER072W ULI1P43604 169 aa6.44□□□□□ -1.38
VTC1YER072W AI2P03876 854 aa6.43□□□□□ -1.38
VTC1YER072W IOC2Q12072 812 aa6.43□□□□□ -1.38
VTC1YER072W RSM7P47150 247 aa6.41□□□□□ -1.38
VTC1YER072W PIB1Q06651 286 aa6.34□□□□□ -1.39
VTC1YER072W YAH1Q12184 172 aaKnown RBP6.29□□□□□ -1.4
VTC1YER072W MSB4Q12317 492 aa6.29□□□□□ -1.4
VTC1YER072W RTG1P32607 177 aa6.28□□□□□ -1.4
VTC1YER072W EAP1P36041 632 aaKnown RBP6.28□□□□□ -1.4
VTC1YER072W NCR1Q12200 1170 aa6.26□□□□□ -1.41
VTC1YER072W TRP5P00931 707 aaKnown RBP6.23□□□□□ -1.41
VTC1YER072W SET4P42948 560 aa6.22□□□□□ -1.41
VTC1YER072W YOL036WQ08206 761 aa6.21□□□□□ -1.42
VTC1YER072W SEC61P32915 480 aa6.19□□□□□ -1.42
VTC1YER072W YNL035CP53962 389 aaKnown RBP6.19□□□□□ -1.42
VTC1YER072W MRM1P25270 412 aa6.16□□□□□ -1.42
VTC1YER072W PSD2P53037 1138 aaKnown RBP6.15□□□□□ -1.42
VTC1YER072W YLR271WQ06152 274 aa6.14□□□□□ -1.43
VTC1YER072W BCK2P33306 851 aa6.13□□□□□ -1.43
VTC1YER072W TFG1P41895 735 aaPredicted RBP6.12□□□□□ -1.43
VTC1YER072W SAP30P38429 201 aa6.1□□□□□ -1.43
VTC1YER072W CHL1P22516 861 aaPredicted RBP6.07□□□□□ -1.44
VTC1YER072W DBP1P24784 617 aaKnown RBP6.07□□□□□ -1.44
VTC1YER072W YMR1P47147 688 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
VTC1YER072W VMA1P17255 1071 aaKnown RBP6.06□□□□□ -1.44
VTC1YER072W YFR006WP43590 535 aa6.05□□□□□ -1.44
VTC1YER072W SAM3Q08986 587 aa6.05□□□□□ -1.44
VTC1YER072W DAN4P47179 1161 aa6.04□□□□□ -1.44
VTC1YER072W VPS29P38759 282 aa6.03□□□□□ -1.44
VTC1YER072W YDL129WQ07555 291 aa6.03□□□□□ -1.44
VTC1YER072W PRE3P38624 215 aa6.02□□□□□ -1.45
VTC1YER072W JIP4Q03361 876 aa6.02□□□□□ -1.45
VTC1YER072W STS1P38637 319 aa5.99□□□□□ -1.45
VTC1YER072W RTG3P38165 486 aa5.96□□□□□ -1.46
VTC1YER072W XDJ1P39102 459 aa5.95□□□□□ -1.46
VTC1YER072W ABP1P15891 592 aaKnown RBP5.94□□□□□ -1.46
VTC1YER072W VRP1P37370 817 aa5.93□□□□□ -1.46
VTC1YER072W GYP5Q12344 894 aa5.93□□□□□ -1.46
VTC1YER072W HTA1P04911 132 aaKnown RBP5.92□□□□□ -1.46
VTC1YER072W HTA2P04912 132 aa5.92□□□□□ -1.46
VTC1YER072W PTC4P38089 393 aa5.91□□□□□ -1.46
VTC1YER072W DCW1P36091 449 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms