RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C SGS1P35187 1447 aa20.04■□□□□ 0.8
VPS60YDR486C MON2P48563 1636 aaPredicted RBP19.87■□□□□ 0.77
VPS60YDR486C INO80P53115 1489 aa19.81■□□□□ 0.76
VPS60YDR486C TCB3Q03640 1545 aaKnown RBP19.71■□□□□ 0.75
VPS60YDR486C TY1B-DR4Q07793 1604 aa19.53■□□□□ 0.72
VPS60YDR486C SWR1Q05471 1514 aa19.31■□□□□ 0.68
VPS60YDR486C HSL1P34244 1518 aa19.08■□□□□ 0.64
VPS60YDR486C SPT6P23615 1451 aaKnown RBP19.02■□□□□ 0.63
VPS60YDR486C DNA2P38859 1522 aa18.93■□□□□ 0.62
VPS60YDR486C SSN2P38931 1420 aa18.92■□□□□ 0.62
VPS60YDR486C SPA2P23201 1466 aaKnown RBP18.86■□□□□ 0.61
VPS60YDR486C KOG1P38873 1557 aa18.76■□□□□ 0.59
VPS60YDR486C HIR3P47171 1648 aa18.71■□□□□ 0.58
VPS60YDR486C XRN1P22147 1528 aaKnown RBP18.49■□□□□ 0.55
VPS60YDR486C DRS1P32892 752 aaKnown RBP18.29■□□□□ 0.52
VPS60YDR486C REV3P14284 1504 aa18.22■□□□□ 0.51
VPS60YDR486C ECM5Q03214 1411 aa18.22■□□□□ 0.51
VPS60YDR486C THO2P53552 1597 aaKnown RBP18.21■□□□□ 0.51
VPS60YDR486C BUD4P47136 1447 aa18.21■□□□□ 0.51
VPS60YDR486C SIN3P22579 1536 aa18.07■□□□□ 0.48
VPS60YDR486C TAF2P23255 1407 aa17.98■□□□□ 0.47
VPS60YDR486C ATG2P53855 1592 aa17.95■□□□□ 0.46
VPS60YDR486C MDS3P53094 1487 aa17.95■□□□□ 0.46
VPS60YDR486C SSK2P53599 1579 aa17.94■□□□□ 0.46
VPS60YDR486C PEP1P32319 1579 aa17.89■□□□□ 0.45
VPS60YDR486C ESP1Q03018 1630 aa17.8■□□□□ 0.44
VPS60YDR486C SKI3P17883 1432 aaKnown RBP17.78■□□□□ 0.44
VPS60YDR486C RSE1Q04693 1361 aaKnown RBP17.68■□□□□ 0.42
VPS60YDR486C MYO2P19524 1574 aaKnown RBP17.66■□□□□ 0.42
VPS60YDR486C YPK9Q12697 1472 aa17.56■□□□□ 0.4
VPS60YDR486C SCC2Q04002 1493 aa17.46■□□□□ 0.39
VPS60YDR486C UFD4P33202 1483 aa17.39■□□□□ 0.37
VPS60YDR486C BPT1P14772 1559 aa17.39■□□□□ 0.37
VPS60YDR486C RPO31P04051 1460 aa17.37■□□□□ 0.37
VPS60YDR486C POL1P13382 1468 aa17.32■□□□□ 0.36
VPS60YDR486C YCF1P39109 1515 aaKnown RBP17.22■□□□□ 0.35
VPS60YDR486C STU1P38198 1513 aa17.21■□□□□ 0.35
VPS60YDR486C RKR1Q04781 1562 aa17.21■□□□□ 0.35
VPS60YDR486C MTC1P47018 478 aaKnown RBP17.19■□□□□ 0.34
VPS60YDR486C TOP2P06786 1428 aaKnown RBP17.19■□□□□ 0.34
VPS60YDR486C TY2B-LR1P0C2J3 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-FP0CX63 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-GR2P0CX64 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-CP25384 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-DR2Q03494 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY1B-DR1Q03855 1755 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-DR3Q07791 1770 aaKnown RBP17.17■□□□□ 0.34
VPS60YDR486C TY2B-OR1Q12113 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-DR1Q12472 1770 aa17.17■□□□□ 0.34
VPS60YDR486C TY2B-OR2Q12501 1770 aa17.17■□□□□ 0.34
VPS60YDR486C YOR1P53049 1477 aa17.11■□□□□ 0.33
VPS60YDR486C SMC4Q12267 1418 aa17.04■□□□□ 0.32
VPS60YDR486C TY1B-DR3Q99231 1755 aa17.02■□□□□ 0.32
VPS60YDR486C CHD1P32657 1468 aa17■□□□□ 0.31
VPS60YDR486C TY2B-BQ12491 1770 aa17■□□□□ 0.31
VPS60YDR486C CDC25P04821 1589 aa16.98■□□□□ 0.31
VPS60YDR486C TY1B-BRQ12193 1756 aa16.97■□□□□ 0.31
VPS60YDR486C TY1B-GR3Q12316 1755 aa16.97■□□□□ 0.31
VPS60YDR486C TY1B-ORQ92393 1755 aa16.97■□□□□ 0.31
VPS60YDR486C YTA7P40340 1379 aa16.97■□□□□ 0.31
VPS60YDR486C RQC2Q12532 1038 aaKnown RBP16.93■□□□□ 0.3
VPS60YDR486C TY1B-HO13535 1793 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-DR5P0C2I2 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-DR6P0C2I3 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-LR2P0C2I5 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-LR3P0C2I6 1755 aaKnown RBP16.91■□□□□ 0.3
VPS60YDR486C TY1B-PR1P0C2I9 1755 aaKnown RBP16.91■□□□□ 0.3
VPS60YDR486C TY1B-PR2P0C2J0 1756 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-PR3P0C2J1 1755 aaKnown RBP16.91■□□□□ 0.3
VPS60YDR486C TY1B-JR1P47098 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-ML2Q03434 1755 aaKnown RBP16.91■□□□□ 0.3
VPS60YDR486C TY1B-ER1Q03612 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-ML1Q04711 1755 aaKnown RBP16.91■□□□□ 0.3
VPS60YDR486C TY1B-GR2Q12269 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-OLQ12273 1755 aa16.91■□□□□ 0.3
VPS60YDR486C TY1B-PLQ12414 1755 aaKnown RBP16.91■□□□□ 0.3
VPS60YDR486C MMS22Q06164 1454 aa16.89■□□□□ 0.29
VPS60YDR486C PAN1P32521 1480 aa16.88■□□□□ 0.29
VPS60YDR486C MYO4P32492 1471 aa16.86■□□□□ 0.29
VPS60YDR486C SPP41P38904 1435 aa16.81■□□□□ 0.28
VPS60YDR486C ESC1Q03661 1658 aaKnown RBP16.79■□□□□ 0.28
VPS60YDR486C DNF1P32660 1571 aa16.79■□□□□ 0.28
VPS60YDR486C TSC11P40061 1430 aa16.7■□□□□ 0.26
VPS60YDR486C RPA190P10964 1664 aaKnown RBP16.69■□□□□ 0.26
VPS60YDR486C VTH1P40438 1549 aa16.68■□□□□ 0.26
VPS60YDR486C VTH2P40890 1549 aa16.68■□□□□ 0.26
VPS60YDR486C TRM732Q03496 1420 aa16.65■□□□□ 0.26
VPS60YDR486C SNQ2P32568 1501 aaKnown RBP16.61■□□□□ 0.25
VPS60YDR486C SAS10Q12136 610 aaPredicted RBP16.61■□□□□ 0.25
VPS60YDR486C TY1B-JR2P47100 1755 aaKnown RBP16.61■□□□□ 0.25
VPS60YDR486C TY1B-ER2Q03619 1755 aa16.61■□□□□ 0.25
VPS60YDR486C TY1B-MR1Q04214 1755 aa16.61■□□□□ 0.25
VPS60YDR486C TY1B-MR2Q04670 1755 aaKnown RBP16.61■□□□□ 0.25
VPS60YDR486C TY1B-LR1Q12088 1755 aaKnown RBP16.61■□□□□ 0.25
VPS60YDR486C TY1B-NL1Q12112 1755 aa16.61■□□□□ 0.25
VPS60YDR486C TY1B-GR1Q12141 1755 aa16.61■□□□□ 0.25
VPS60YDR486C TY1B-BLQ12490 1755 aa16.61■□□□□ 0.25
VPS60YDR486C MET5P47169 1442 aa16.54■□□□□ 0.24
VPS60YDR486C STH1P32597 1359 aa16.54■□□□□ 0.24
VPS60YDR486C NTE1Q04958 1679 aa16.5■□□□□ 0.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms