RNA–Protein interactions for RNA: YDR210W-A

YDR210W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR210W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR210W-AYDR210W-A MTC1P47018 478 aaKnown RBP13.94□□□□□ -0.18
YDR210W-AYDR210W-A DRS1P32892 752 aaKnown RBP13.29□□□□□ -0.28
YDR210W-AYDR210W-A FAP1P53971 965 aa12.55□□□□□ -0.4
YDR210W-AYDR210W-A PRY3P47033 881 aa11.84□□□□□ -0.51
YDR210W-AYDR210W-A PRI1P10363 409 aa11.6□□□□□ -0.55
YDR210W-AYDR210W-A ISW2Q08773 1120 aa11.56□□□□□ -0.56
YDR210W-AYDR210W-A DIP2Q12220 943 aaPredicted RBP11.56□□□□□ -0.56
YDR210W-AYDR210W-A AAD16Q02895 342 aa11.53□□□□□ -0.56
YDR210W-AYDR210W-A RPG1P38249 964 aaKnown RBP11.38□□□□□ -0.59
YDR210W-AYDR210W-A AVT3P36062 692 aa11.19□□□□□ -0.62
YDR210W-AYDR210W-A BFR2Q06631 534 aaKnown RBP11.19□□□□□ -0.62
YDR210W-AYDR210W-A YCK3P39962 524 aa11.14□□□□□ -0.63
YDR210W-AYDR210W-A RSE1Q04693 1361 aaKnown RBP11.14□□□□□ -0.63
YDR210W-AYDR210W-A HAA1Q12753 694 aaKnown RBP11□□□□□ -0.65
YDR210W-AYDR210W-A TSR3Q12094 313 aaKnown RBP10.97□□□□□ -0.65
YDR210W-AYDR210W-A RPL17AP05740 184 aaKnown RBP10.74□□□□□ -0.69
YDR210W-AYDR210W-A RPL17BP46990 184 aaKnown RBP10.74□□□□□ -0.69
YDR210W-AYDR210W-A REB1P21538 810 aa10.71□□□□□ -0.69
YDR210W-AYDR210W-A MRPL32P25348 183 aa10.61□□□□□ -0.71
YDR210W-AYDR210W-A SPT21P35209 758 aa10.25□□□□□ -0.77
YDR210W-AYDR210W-A YGL015CP33199 130 aa10.12□□□□□ -0.79
YDR210W-AYDR210W-A YKR023WP36119 530 aaKnown RBP10.08□□□□□ -0.8
YDR210W-AYDR210W-A TFA1P36100 482 aa10.03□□□□□ -0.8
YDR210W-AYDR210W-A CDC27P38042 758 aa10.03□□□□□ -0.8
YDR210W-AYDR210W-A RIM101P33400 625 aa9.99□□□□□ -0.81
YDR210W-AYDR210W-A TFC8Q12308 588 aa9.9□□□□□ -0.82
YDR210W-AYDR210W-A HOP09932 586 aa9.87□□□□□ -0.83
YDR210W-AYDR210W-A UBP10P53874 792 aaPredicted RBP9.8□□□□□ -0.84
YDR210W-AYDR210W-A DCD1P06773 312 aa9.79□□□□□ -0.84
YDR210W-AYDR210W-A MAP2P38174 421 aaKnown RBP9.71□□□□□ -0.86
YDR210W-AYDR210W-A BUD31P25337 157 aaPredicted RBP9.62□□□□□ -0.87
YDR210W-AYDR210W-A OXP1P28273 1286 aa9.62□□□□□ -0.87
YDR210W-AYDR210W-A YIL055CP40523 627 aaKnown RBP9.58□□□□□ -0.88
YDR210W-AYDR210W-A BCH2P36122 765 aa9.57□□□□□ -0.88
YDR210W-AYDR210W-A SCY1P53009 804 aa9.57□□□□□ -0.88
YDR210W-AYDR210W-A PTP3P40048 928 aa9.53□□□□□ -0.88
YDR210W-AYDR210W-A SLX5P32828 619 aaKnown RBP9.48□□□□□ -0.89
YDR210W-AYDR210W-A TIF4632P39936 914 aaKnown RBP9.44□□□□□ -0.9
YDR210W-AYDR210W-A RSM7P47150 247 aa9.4□□□□□ -0.9
YDR210W-AYDR210W-A YAH1Q12184 172 aaKnown RBP9.4□□□□□ -0.9
YDR210W-AYDR210W-A EPS1P40557 701 aa9.37□□□□□ -0.91
YDR210W-AYDR210W-A TGL3P40308 642 aa9.36□□□□□ -0.91
YDR210W-AYDR210W-A BBC1P47068 1157 aa9.32□□□□□ -0.92
YDR210W-AYDR210W-A BDF1P35817 686 aa9.31□□□□□ -0.92
YDR210W-AYDR210W-A AI2P03876 854 aa9.28□□□□□ -0.92
YDR210W-AYDR210W-A SSP1P38871 571 aa9.25□□□□□ -0.93
YDR210W-AYDR210W-A YLR271WQ06152 274 aa9.25□□□□□ -0.93
YDR210W-AYDR210W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94not detected
YDR210W-AYDR210W-A PSD2P53037 1138 aaKnown RBP9.08□□□□□ -0.96
YDR210W-AYDR210W-A SIS1P25294 352 aaKnown RBP9.07□□□□□ -0.96
YDR210W-AYDR210W-A UBP9P39967 754 aa9.05□□□□□ -0.96
YDR210W-AYDR210W-A NSR1P27476 414 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
YDR210W-AYDR210W-A MGA2P40578 1113 aa9□□□□□ -0.97
YDR210W-AYDR210W-A YOR238WQ08634 303 aa9□□□□□ -0.97
YDR210W-AYDR210W-A MST1P07236 462 aa8.97□□□□□ -0.97
YDR210W-AYDR210W-A YAP5P40574 245 aa8.97□□□□□ -0.97
YDR210W-AYDR210W-A MRM1P25270 412 aa8.95□□□□□ -0.98
YDR210W-AYDR210W-A CST9Q06032 482 aa8.91□□□□□ -0.98
YDR210W-AYDR210W-A RTG3P38165 486 aa8.82□□□□□ -1
YDR210W-AYDR210W-A GTT3P39996 337 aa8.78□□□□□ -1
YDR210W-AYDR210W-A YBL029C-AQ3E756 94 aa8.76□□□□□ -1.01
YDR210W-AYDR210W-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
YDR210W-AYDR210W-A VPS29P38759 282 aa8.74□□□□□ -1.01
YDR210W-AYDR210W-A PIB1Q06651 286 aa8.72□□□□□ -1.01
YDR210W-AYDR210W-A VNX1P42839 908 aa8.71□□□□□ -1.02
YDR210W-AYDR210W-A WSC3Q12215 556 aa8.7□□□□□ -1.02
YDR210W-AYDR210W-A DBP1P24784 617 aaKnown RBP8.68□□□□□ -1.02
YDR210W-AYDR210W-A RCR1P38212 213 aa8.65□□□□□ -1.02
YDR210W-AYDR210W-A SPP1Q03012 353 aa8.65□□□□□ -1.02
YDR210W-AYDR210W-A YFR006WP43590 535 aa8.63□□□□□ -1.03
YDR210W-AYDR210W-A STS1P38637 319 aa8.62□□□□□ -1.03
YDR210W-AYDR210W-A TIF11P38912 153 aaKnown RBP8.6□□□□□ -1.03
YDR210W-AYDR210W-A MSB4Q12317 492 aa8.57□□□□□ -1.04
YDR210W-AYDR210W-A VMA1P17255 1071 aaKnown RBP8.56□□□□□ -1.04
YDR210W-AYDR210W-A EAP1P36041 632 aaKnown RBP8.54□□□□□ -1.04
YDR210W-AYDR210W-A ULI1P43604 169 aa8.53□□□□□ -1.04
YDR210W-AYDR210W-A YOL036WQ08206 761 aa8.52□□□□□ -1.05
YDR210W-AYDR210W-A SAM3Q08986 587 aa8.52□□□□□ -1.05
YDR210W-AYDR210W-A RAM2P29703 316 aa8.51□□□□□ -1.05
YDR210W-AYDR210W-A SET4P42948 560 aa8.5□□□□□ -1.05
YDR210W-AYDR210W-A MAK11P20484 414 aaKnown RBP8.49□□□□□ -1.05
YDR210W-AYDR210W-A IOC2Q12072 812 aa8.45□□□□□ -1.06
YDR210W-AYDR210W-A ABP1P15891 592 aaKnown RBP8.44□□□□□ -1.06
YDR210W-AYDR210W-A LDB19Q12502 818 aa8.44□□□□□ -1.06
YDR210W-AYDR210W-A GYP5Q12344 894 aa8.43□□□□□ -1.06
YDR210W-AYDR210W-A TRP5P00931 707 aaKnown RBP8.41□□□□□ -1.06
YDR210W-AYDR210W-A MIF2P35201 549 aa8.41□□□□□ -1.06
YDR210W-AYDR210W-A FKH1P40466 484 aa8.39□□□□□ -1.07
YDR210W-AYDR210W-A YJL171CP46992 396 aa8.37□□□□□ -1.07
YDR210W-AYDR210W-A AIR2Q12476 344 aaKnown RBP8.37□□□□□ -1.07
YDR210W-AYDR210W-A COQ8P27697 501 aa8.36□□□□□ -1.07
YDR210W-AYDR210W-A HTA1P04911 132 aaKnown RBP8.35□□□□□ -1.07
YDR210W-AYDR210W-A HTA2P04912 132 aa8.35□□□□□ -1.07
YDR210W-AYDR210W-A GRE2Q12068 342 aaKnown RBP8.35□□□□□ -1.07
YDR210W-AYDR210W-A RTG1P32607 177 aa8.34□□□□□ -1.07
YDR210W-AYDR210W-A YNL035CP53962 389 aaKnown RBP8.34□□□□□ -1.07
YDR210W-AYDR210W-A PTC3P34221 468 aaKnown RBP8.33□□□□□ -1.08
YDR210W-AYDR210W-A DCW1P36091 449 aa8.33□□□□□ -1.08
YDR210W-AYDR210W-A SEC61P32915 480 aa8.32□□□□□ -1.08
YDR210W-AYDR210W-A EDS1P38073 919 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms