RNA–Protein interactions for RNA: YDR178W

SDH4, Transcript of Membrane anchor subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SDH4, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH4YDR178W MON2P48563 1636 aaPredicted RBP12.14□□□□□ -0.47
SDH4YDR178W INO80P53115 1489 aa12.02□□□□□ -0.49
SDH4YDR178W SGS1P35187 1447 aa11.99□□□□□ -0.49
SDH4YDR178W TCB3Q03640 1545 aaKnown RBP11.86□□□□□ -0.51
SDH4YDR178W TY1B-DR4Q07793 1604 aa11.83□□□□□ -0.52
SDH4YDR178W SWR1Q05471 1514 aa11.73□□□□□ -0.53
SDH4YDR178W DNA2P38859 1522 aa11.53□□□□□ -0.56
SDH4YDR178W HSL1P34244 1518 aa11.51□□□□□ -0.57
SDH4YDR178W SPT6P23615 1451 aaKnown RBP11.44□□□□□ -0.58
SDH4YDR178W KOG1P38873 1557 aa11.38□□□□□ -0.59
SDH4YDR178W SPA2P23201 1466 aaKnown RBP11.31□□□□□ -0.6
SDH4YDR178W HIR3P47171 1648 aa11.28□□□□□ -0.6
SDH4YDR178W SSN2P38931 1420 aa11.28□□□□□ -0.6
SDH4YDR178W XRN1P22147 1528 aaKnown RBP11.11□□□□□ -0.63
SDH4YDR178W THO2P53552 1597 aaKnown RBP11.01□□□□□ -0.65
SDH4YDR178W ECM5Q03214 1411 aa11□□□□□ -0.65
SDH4YDR178W BUD4P47136 1447 aa10.99□□□□□ -0.65
SDH4YDR178W REV3P14284 1504 aa10.95□□□□□ -0.66
SDH4YDR178W MDS3P53094 1487 aa10.87□□□□□ -0.67
SDH4YDR178W SIN3P22579 1536 aa10.86□□□□□ -0.67
SDH4YDR178W PEP1P32319 1579 aa10.85□□□□□ -0.67
SDH4YDR178W ATG2P53855 1592 aa10.85□□□□□ -0.67
SDH4YDR178W DRS1P32892 752 aaKnown RBP10.8□□□□□ -0.68
SDH4YDR178W SSK2P53599 1579 aa10.78□□□□□ -0.68
SDH4YDR178W TAF2P23255 1407 aa10.76□□□□□ -0.69
SDH4YDR178W RSE1Q04693 1361 aaKnown RBP10.76□□□□□ -0.69
SDH4YDR178W ESP1Q03018 1630 aa10.69□□□□□ -0.7
SDH4YDR178W SKI3P17883 1432 aaKnown RBP10.65□□□□□ -0.7
SDH4YDR178W MYO2P19524 1574 aaKnown RBP10.56□□□□□ -0.72
SDH4YDR178W YPK9Q12697 1472 aa10.55□□□□□ -0.72
SDH4YDR178W SCC2Q04002 1493 aa10.51□□□□□ -0.73
SDH4YDR178W BPT1P14772 1559 aa10.5□□□□□ -0.73
SDH4YDR178W UFD4P33202 1483 aa10.46□□□□□ -0.74
SDH4YDR178W RPO31P04051 1460 aa10.44□□□□□ -0.74
SDH4YDR178W YCF1P39109 1515 aaKnown RBP10.38□□□□□ -0.75
SDH4YDR178W TY2B-LR1P0C2J3 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-FP0CX63 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-GR2P0CX64 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-CP25384 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-DR2Q03494 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY1B-DR1Q03855 1755 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-DR3Q07791 1770 aaKnown RBP10.37□□□□□ -0.75
SDH4YDR178W TY2B-OR1Q12113 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-DR1Q12472 1770 aa10.37□□□□□ -0.75
SDH4YDR178W TY2B-OR2Q12501 1770 aa10.37□□□□□ -0.75
SDH4YDR178W POL1P13382 1468 aa10.36□□□□□ -0.75
SDH4YDR178W MTC1P47018 478 aaKnown RBP10.33□□□□□ -0.76
SDH4YDR178W RKR1Q04781 1562 aa10.31□□□□□ -0.76
SDH4YDR178W TOP2P06786 1428 aaKnown RBP10.3□□□□□ -0.76
SDH4YDR178W STU1P38198 1513 aa10.28□□□□□ -0.76
SDH4YDR178W TY1B-BRQ12193 1756 aa10.27□□□□□ -0.77
SDH4YDR178W TY1B-GR3Q12316 1755 aa10.27□□□□□ -0.77
SDH4YDR178W TY1B-ORQ92393 1755 aa10.27□□□□□ -0.77
SDH4YDR178W TY1B-DR3Q99231 1755 aa10.27□□□□□ -0.77
SDH4YDR178W TY2B-BQ12491 1770 aa10.26□□□□□ -0.77
SDH4YDR178W CDC25P04821 1589 aa10.25□□□□□ -0.77
SDH4YDR178W CHD1P32657 1468 aa10.24□□□□□ -0.77
SDH4YDR178W YOR1P53049 1477 aa10.24□□□□□ -0.77
SDH4YDR178W TY1B-HO13535 1793 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-DR5P0C2I2 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-DR6P0C2I3 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-LR2P0C2I5 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-LR3P0C2I6 1755 aaKnown RBP10.21□□□□□ -0.77
SDH4YDR178W TY1B-PR1P0C2I9 1755 aaKnown RBP10.21□□□□□ -0.77
SDH4YDR178W TY1B-PR2P0C2J0 1756 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-PR3P0C2J1 1755 aaKnown RBP10.21□□□□□ -0.77
SDH4YDR178W TY1B-JR1P47098 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-ML2Q03434 1755 aaKnown RBP10.21□□□□□ -0.77
SDH4YDR178W TY1B-ER1Q03612 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-ML1Q04711 1755 aaKnown RBP10.21□□□□□ -0.77
SDH4YDR178W TY1B-GR2Q12269 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-OLQ12273 1755 aa10.21□□□□□ -0.77
SDH4YDR178W TY1B-PLQ12414 1755 aaKnown RBP10.21□□□□□ -0.77
SDH4YDR178W SMC4Q12267 1418 aa10.19□□□□□ -0.78
SDH4YDR178W DNF1P32660 1571 aa10.18□□□□□ -0.78
SDH4YDR178W PAN1P32521 1480 aa10.16□□□□□ -0.78
SDH4YDR178W ESC1Q03661 1658 aaKnown RBP10.13□□□□□ -0.79
SDH4YDR178W MMS22Q06164 1454 aa10.13□□□□□ -0.79
SDH4YDR178W RPA190P10964 1664 aaKnown RBP10.09□□□□□ -0.79
SDH4YDR178W RQC2Q12532 1038 aaKnown RBP10.08□□□□□ -0.8
SDH4YDR178W SPP41P38904 1435 aa10.07□□□□□ -0.8
SDH4YDR178W MYO4P32492 1471 aa10.06□□□□□ -0.8
SDH4YDR178W YTA7P40340 1379 aa10.05□□□□□ -0.8
SDH4YDR178W TY1B-JR2P47100 1755 aaKnown RBP10.02□□□□□ -0.81
SDH4YDR178W TY1B-ER2Q03619 1755 aa10.02□□□□□ -0.81
SDH4YDR178W TY1B-MR1Q04214 1755 aa10.02□□□□□ -0.81
SDH4YDR178W TY1B-MR2Q04670 1755 aaKnown RBP10.02□□□□□ -0.81
SDH4YDR178W TY1B-LR1Q12088 1755 aaKnown RBP10.02□□□□□ -0.81
SDH4YDR178W TY1B-NL1Q12112 1755 aa10.02□□□□□ -0.81
SDH4YDR178W TY1B-GR1Q12141 1755 aa10.02□□□□□ -0.81
SDH4YDR178W TY1B-BLQ12490 1755 aa10.02□□□□□ -0.81
SDH4YDR178W VTH1P40438 1549 aa10.01□□□□□ -0.81
SDH4YDR178W VTH2P40890 1549 aa10.01□□□□□ -0.81
SDH4YDR178W TSC11P40061 1430 aa10□□□□□ -0.81
SDH4YDR178W MET5P47169 1442 aa9.99□□□□□ -0.81
SDH4YDR178W TRM732Q03496 1420 aa9.98□□□□□ -0.81
SDH4YDR178W NTE1Q04958 1679 aa9.94□□□□□ -0.82
SDH4YDR178W SNQ2P32568 1501 aaKnown RBP9.92□□□□□ -0.82
SDH4YDR178W RPO21P04050 1733 aaKnown RBP9.9□□□□□ -0.82
SDH4YDR178W YRF1-1P0CX20 1796 aa9.9□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms