RNA–Protein interactions for RNA: YDL143W

CCT4, Transcript of Subunit of the cytosolic chaperonin Cct ring complex, yeastyeast

Gene CCT4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCT4YDL143W SGS1P35187 1447 aa20.12■□□□□ 0.81
CCT4YDL143W MON2P48563 1636 aaPredicted RBP20.05■□□□□ 0.8
CCT4YDL143W INO80P53115 1489 aa20.01■□□□□ 0.79
CCT4YDL143W TCB3Q03640 1545 aaKnown RBP19.82■□□□□ 0.76
CCT4YDL143W TY1B-DR4Q07793 1604 aa19.64■□□□□ 0.73
CCT4YDL143W SWR1Q05471 1514 aa19.44■□□□□ 0.7
CCT4YDL143W HSL1P34244 1518 aa19.15■□□□□ 0.66
CCT4YDL143W SPT6P23615 1451 aaKnown RBP19.11■□□□□ 0.65
CCT4YDL143W DNA2P38859 1522 aa19.1■□□□□ 0.65
CCT4YDL143W SPA2P23201 1466 aaKnown RBP18.98■□□□□ 0.63
CCT4YDL143W KOG1P38873 1557 aa18.95■□□□□ 0.62
CCT4YDL143W SSN2P38931 1420 aa18.93■□□□□ 0.62
CCT4YDL143W HIR3P47171 1648 aa18.78■□□□□ 0.6
CCT4YDL143W XRN1P22147 1528 aaKnown RBP18.58■□□□□ 0.56
CCT4YDL143W DRS1P32892 752 aaKnown RBP18.38■□□□□ 0.53
CCT4YDL143W ECM5Q03214 1411 aa18.35■□□□□ 0.53
CCT4YDL143W THO2P53552 1597 aaKnown RBP18.34■□□□□ 0.53
CCT4YDL143W BUD4P47136 1447 aa18.33■□□□□ 0.52
CCT4YDL143W REV3P14284 1504 aa18.28■□□□□ 0.52
CCT4YDL143W SIN3P22579 1536 aa18.12■□□□□ 0.49
CCT4YDL143W TAF2P23255 1407 aa18.06■□□□□ 0.48
CCT4YDL143W MDS3P53094 1487 aa18.05■□□□□ 0.48
CCT4YDL143W ATG2P53855 1592 aa18.03■□□□□ 0.48
CCT4YDL143W SSK2P53599 1579 aa18■□□□□ 0.47
CCT4YDL143W PEP1P32319 1579 aa17.98■□□□□ 0.47
CCT4YDL143W RSE1Q04693 1361 aaKnown RBP17.93■□□□□ 0.46
CCT4YDL143W ESP1Q03018 1630 aa17.89■□□□□ 0.45
CCT4YDL143W SKI3P17883 1432 aaKnown RBP17.88■□□□□ 0.45
CCT4YDL143W MYO2P19524 1574 aaKnown RBP17.73■□□□□ 0.43
CCT4YDL143W YPK9Q12697 1472 aa17.63■□□□□ 0.41
CCT4YDL143W BPT1P14772 1559 aa17.53■□□□□ 0.4
CCT4YDL143W SCC2Q04002 1493 aa17.53■□□□□ 0.4
CCT4YDL143W UFD4P33202 1483 aa17.49■□□□□ 0.39
CCT4YDL143W RPO31P04051 1460 aa17.44■□□□□ 0.38
CCT4YDL143W MTC1P47018 478 aaKnown RBP17.44■□□□□ 0.38
CCT4YDL143W POL1P13382 1468 aa17.35■□□□□ 0.37
CCT4YDL143W YCF1P39109 1515 aaKnown RBP17.29■□□□□ 0.36
CCT4YDL143W RKR1Q04781 1562 aa17.28■□□□□ 0.36
CCT4YDL143W TY2B-LR1P0C2J3 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-FP0CX63 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-GR2P0CX64 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-CP25384 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-DR2Q03494 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY1B-DR1Q03855 1755 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-DR3Q07791 1770 aaKnown RBP17.27■□□□□ 0.36
CCT4YDL143W TY2B-OR1Q12113 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-DR1Q12472 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TY2B-OR2Q12501 1770 aa17.27■□□□□ 0.36
CCT4YDL143W TOP2P06786 1428 aaKnown RBP17.26■□□□□ 0.35
CCT4YDL143W STU1P38198 1513 aa17.26■□□□□ 0.35
CCT4YDL143W YOR1P53049 1477 aa17.16■□□□□ 0.34
CCT4YDL143W TY1B-DR3Q99231 1755 aa17.11■□□□□ 0.33
CCT4YDL143W SMC4Q12267 1418 aa17.1■□□□□ 0.33
CCT4YDL143W RQC2Q12532 1038 aaKnown RBP17.1■□□□□ 0.33
CCT4YDL143W TY2B-BQ12491 1770 aa17.1■□□□□ 0.33
CCT4YDL143W CHD1P32657 1468 aa17.1■□□□□ 0.33
CCT4YDL143W CDC25P04821 1589 aa17.09■□□□□ 0.33
CCT4YDL143W TY1B-BRQ12193 1756 aa17.09■□□□□ 0.33
CCT4YDL143W TY1B-GR3Q12316 1755 aa17.09■□□□□ 0.33
CCT4YDL143W TY1B-ORQ92393 1755 aa17.09■□□□□ 0.33
CCT4YDL143W YTA7P40340 1379 aa17.02■□□□□ 0.32
CCT4YDL143W TY1B-HO13535 1793 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-DR5P0C2I2 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-DR6P0C2I3 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-LR2P0C2I5 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-LR3P0C2I6 1755 aaKnown RBP17.01■□□□□ 0.31
CCT4YDL143W TY1B-PR1P0C2I9 1755 aaKnown RBP17.01■□□□□ 0.31
CCT4YDL143W TY1B-PR2P0C2J0 1756 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-PR3P0C2J1 1755 aaKnown RBP17.01■□□□□ 0.31
CCT4YDL143W TY1B-JR1P47098 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-ML2Q03434 1755 aaKnown RBP17.01■□□□□ 0.31
CCT4YDL143W TY1B-ER1Q03612 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-ML1Q04711 1755 aaKnown RBP17.01■□□□□ 0.31
CCT4YDL143W TY1B-GR2Q12269 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-OLQ12273 1755 aa17.01■□□□□ 0.31
CCT4YDL143W TY1B-PLQ12414 1755 aaKnown RBP17.01■□□□□ 0.31
CCT4YDL143W PAN1P32521 1480 aa16.98■□□□□ 0.31
CCT4YDL143W MMS22Q06164 1454 aa16.98■□□□□ 0.31
CCT4YDL143W ESC1Q03661 1658 aaKnown RBP16.94■□□□□ 0.3
CCT4YDL143W MYO4P32492 1471 aa16.9■□□□□ 0.3
CCT4YDL143W SPP41P38904 1435 aa16.88■□□□□ 0.29
CCT4YDL143W DNF1P32660 1571 aa16.88■□□□□ 0.29
CCT4YDL143W RPA190P10964 1664 aaKnown RBP16.8■□□□□ 0.28
CCT4YDL143W TRM732Q03496 1420 aa16.77■□□□□ 0.27
CCT4YDL143W TSC11P40061 1430 aa16.76■□□□□ 0.27
CCT4YDL143W VTH1P40438 1549 aa16.74■□□□□ 0.27
CCT4YDL143W VTH2P40890 1549 aa16.74■□□□□ 0.27
CCT4YDL143W TY1B-JR2P47100 1755 aaKnown RBP16.71■□□□□ 0.27
CCT4YDL143W TY1B-ER2Q03619 1755 aa16.71■□□□□ 0.27
CCT4YDL143W TY1B-MR1Q04214 1755 aa16.71■□□□□ 0.27
CCT4YDL143W TY1B-MR2Q04670 1755 aaKnown RBP16.71■□□□□ 0.27
CCT4YDL143W TY1B-LR1Q12088 1755 aaKnown RBP16.71■□□□□ 0.27
CCT4YDL143W TY1B-NL1Q12112 1755 aa16.71■□□□□ 0.27
CCT4YDL143W TY1B-GR1Q12141 1755 aa16.71■□□□□ 0.27
CCT4YDL143W TY1B-BLQ12490 1755 aa16.71■□□□□ 0.27
CCT4YDL143W MET5P47169 1442 aa16.69■□□□□ 0.26
CCT4YDL143W SAS10Q12136 610 aaPredicted RBP16.68■□□□□ 0.26
CCT4YDL143W SNQ2P32568 1501 aaKnown RBP16.66■□□□□ 0.26
CCT4YDL143W STH1P32597 1359 aa16.61■□□□□ 0.25
CCT4YDL143W NTE1Q04958 1679 aa16.59■□□□□ 0.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms