RNA–Protein interactions for RNA: YDL133W

SRF1, Transcript of Regulator of phospholipase D (Spo14p), yeastyeast

Gene SRF1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRF1YDL133W MTC1P47018 478 aaKnown RBP13.12□□□□□ -0.31
SRF1YDL133W FAP1P53971 965 aa12.23□□□□□ -0.45
SRF1YDL133W DRS1P32892 752 aaKnown RBP11.97□□□□□ -0.49
SRF1YDL133W PRY3P47033 881 aa11.53□□□□□ -0.56
SRF1YDL133W PRI1P10363 409 aa11.25□□□□□ -0.61
SRF1YDL133W AAD16Q02895 342 aa11.2□□□□□ -0.62
SRF1YDL133W YCK3P39962 524 aa10.97□□□□□ -0.65
SRF1YDL133W RPG1P38249 964 aaKnown RBP10.89□□□□□ -0.67
SRF1YDL133W ISW2Q08773 1120 aa10.88□□□□□ -0.67
SRF1YDL133W SPA2P23201 1466 aaKnown RBP10.83□□□□□ -0.68
SRF1YDL133W SGS1P35187 1447 aa10.75□□□□□ -0.69
SRF1YDL133W TSR3Q12094 313 aaKnown RBP10.71□□□□□ -0.69
SRF1YDL133W HAA1Q12753 694 aaKnown RBP10.67□□□□□ -0.7
SRF1YDL133W SSN2P38931 1420 aa10.63□□□□□ -0.71
SRF1YDL133W DIP2Q12220 943 aaPredicted RBP10.6□□□□□ -0.71
SRF1YDL133W SKI3P17883 1432 aaKnown RBP10.37□□□□□ -0.75
SRF1YDL133W INO80P53115 1489 aa10.33□□□□□ -0.76
SRF1YDL133W RSE1Q04693 1361 aaKnown RBP10.3□□□□□ -0.76
SRF1YDL133W MRPL32P25348 183 aa10.17□□□□□ -0.78
SRF1YDL133W NOP2P40991 618 aaKnown RBP10.16□□□□□ -0.78
SRF1YDL133W AVT3P36062 692 aa10.12□□□□□ -0.79
SRF1YDL133W RPL17AP05740 184 aaKnown RBP10.06□□□□□ -0.8
SRF1YDL133W RPL17BP46990 184 aaKnown RBP10.06□□□□□ -0.8
SRF1YDL133W BFR2Q06631 534 aaKnown RBP10.03□□□□□ -0.8
SRF1YDL133W NSR1P27476 414 aaKnown RBP RIP-Chip data10□□□□□ -0.81not detected
SRF1YDL133W REB1P21538 810 aa9.99□□□□□ -0.81
SRF1YDL133W CHD1P32657 1468 aa9.94□□□□□ -0.82
SRF1YDL133W TCB3Q03640 1545 aaKnown RBP9.9□□□□□ -0.83
SRF1YDL133W MMS22Q06164 1454 aa9.89□□□□□ -0.83
SRF1YDL133W YGL015CP33199 130 aa9.8□□□□□ -0.84
SRF1YDL133W XRN1P22147 1528 aaKnown RBP9.77□□□□□ -0.85
SRF1YDL133W CDC27P38042 758 aa9.73□□□□□ -0.85
SRF1YDL133W UFD4P33202 1483 aa9.71□□□□□ -0.86
SRF1YDL133W TY1B-DR4Q07793 1604 aa9.69□□□□□ -0.86
SRF1YDL133W HSL1P34244 1518 aa9.67□□□□□ -0.86
SRF1YDL133W SPT6P23615 1451 aaKnown RBP9.62□□□□□ -0.87
SRF1YDL133W YKR023WP36119 530 aaKnown RBP9.59□□□□□ -0.87
SRF1YDL133W SPT21P35209 758 aa9.58□□□□□ -0.88
SRF1YDL133W ENP1P38333 483 aaKnown RBP9.58□□□□□ -0.88
SRF1YDL133W SPP41P38904 1435 aa9.57□□□□□ -0.88
SRF1YDL133W TRM732Q03496 1420 aa9.57□□□□□ -0.88
SRF1YDL133W HIR3P47171 1648 aa9.54□□□□□ -0.88
SRF1YDL133W IKI3Q06706 1349 aaKnown RBP9.54□□□□□ -0.88
SRF1YDL133W THO2P53552 1597 aaKnown RBP9.52□□□□□ -0.89
SRF1YDL133W REV3P14284 1504 aa9.51□□□□□ -0.89
SRF1YDL133W SIN3P22579 1536 aa9.51□□□□□ -0.89
SRF1YDL133W STU1P38198 1513 aa9.49□□□□□ -0.89
SRF1YDL133W SSK2P53599 1579 aa9.46□□□□□ -0.89
SRF1YDL133W DCD1P06773 312 aa9.46□□□□□ -0.9
SRF1YDL133W YTA7P40340 1379 aa9.46□□□□□ -0.9
SRF1YDL133W MON2P48563 1636 aaPredicted RBP9.45□□□□□ -0.9
SRF1YDL133W HOP09932 586 aa9.44□□□□□ -0.9
SRF1YDL133W CAB3P36076 571 aa9.44□□□□□ -0.9
SRF1YDL133W STH1P32597 1359 aa9.43□□□□□ -0.9
SRF1YDL133W MAP2P38174 421 aaKnown RBP9.43□□□□□ -0.9
SRF1YDL133W MYO2P19524 1574 aaKnown RBP9.43□□□□□ -0.9
SRF1YDL133W EBP2P36049 427 aaKnown RBP9.42□□□□□ -0.9
SRF1YDL133W POL5P39985 1022 aaKnown RBP9.42□□□□□ -0.9
SRF1YDL133W POL1P13382 1468 aa9.42□□□□□ -0.9
SRF1YDL133W SAS10Q12136 610 aaPredicted RBP9.41□□□□□ -0.9
SRF1YDL133W NUP170P38181 1502 aa9.4□□□□□ -0.91
SRF1YDL133W TAF2P23255 1407 aa9.39□□□□□ -0.91
SRF1YDL133W SSM4P40318 1319 aa9.36□□□□□ -0.91
SRF1YDL133W SEC3P33332 1336 aaKnown RBP9.35□□□□□ -0.91
SRF1YDL133W TFC8Q12308 588 aa9.34□□□□□ -0.91
SRF1YDL133W ECM5Q03214 1411 aa9.34□□□□□ -0.91
SRF1YDL133W BPT1P14772 1559 aa9.34□□□□□ -0.91
SRF1YDL133W SCC2Q04002 1493 aa9.33□□□□□ -0.92
SRF1YDL133W SPT7P35177 1332 aa9.32□□□□□ -0.92
SRF1YDL133W ESP1Q03018 1630 aa9.32□□□□□ -0.92
SRF1YDL133W UBP10P53874 792 aaPredicted RBP9.31□□□□□ -0.92
SRF1YDL133W YPR148CQ06523 435 aa9.29□□□□□ -0.92
SRF1YDL133W PRS1P32895 427 aaKnown RBP9.27□□□□□ -0.93
SRF1YDL133W MYO4P32492 1471 aa9.27□□□□□ -0.93
SRF1YDL133W TFA1P36100 482 aa9.26□□□□□ -0.93
SRF1YDL133W TAF7Q05021 590 aa9.25□□□□□ -0.93
SRF1YDL133W DNA2P38859 1522 aa9.24□□□□□ -0.93
SRF1YDL133W RQC2Q12532 1038 aaKnown RBP9.23□□□□□ -0.93
SRF1YDL133W YOR1P53049 1477 aa9.21□□□□□ -0.94
SRF1YDL133W SMC4Q12267 1418 aa9.2□□□□□ -0.94
SRF1YDL133W RTT106P40161 455 aa9.19□□□□□ -0.94
SRF1YDL133W YPK9Q12697 1472 aa9.18□□□□□ -0.94
SRF1YDL133W SCY1P53009 804 aa9.17□□□□□ -0.94
SRF1YDL133W PAN1P32521 1480 aa9.17□□□□□ -0.94
SRF1YDL133W SNQ2P32568 1501 aaKnown RBP9.16□□□□□ -0.94
SRF1YDL133W PDR10P51533 1564 aa9.15□□□□□ -0.94
SRF1YDL133W BUD31P25337 157 aaPredicted RBP9.15□□□□□ -0.94
SRF1YDL133W RIM101P33400 625 aa9.15□□□□□ -0.94
SRF1YDL133W MLP2P40457 1679 aa9.15□□□□□ -0.94
SRF1YDL133W PEP1P32319 1579 aa9.15□□□□□ -0.95
SRF1YDL133W RKR1Q04781 1562 aa9.15□□□□□ -0.95
SRF1YDL133W SWR1Q05471 1514 aa9.14□□□□□ -0.95
SRF1YDL133W BUD4P47136 1447 aa9.13□□□□□ -0.95
SRF1YDL133W TSC11P40061 1430 aa9.11□□□□□ -0.95
SRF1YDL133W SRB8P25648 1427 aa9.09□□□□□ -0.95
SRF1YDL133W GEA1P47102 1408 aaPredicted RBP9.09□□□□□ -0.95
SRF1YDL133W YCF1P39109 1515 aaKnown RBP9.07□□□□□ -0.96
SRF1YDL133W YLR419WQ06698 1435 aaKnown RBP9.07□□□□□ -0.96
SRF1YDL133W BCH2P36122 765 aa9.05□□□□□ -0.96
SRF1YDL133W IME2P32581 645 aa9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 6.2 ms