RNA–Protein interactions for RNA: YDL087C

LUC7, Transcript of Essential protein associated with the U1 snRNP complex, yeastyeast

Gene LUC7, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LUC7YDL087C MTC1P47018 478 aaKnown RBP16.57■□□□□ 0.24
LUC7YDL087C DRS1P32892 752 aaKnown RBP15.75■□□□□ 0.11
LUC7YDL087C FAP1P53971 965 aa14.58□□□□□ -0.08
LUC7YDL087C PRI1P10363 409 aa13.81□□□□□ -0.2
LUC7YDL087C DIP2Q12220 943 aaPredicted RBP13.72□□□□□ -0.21
LUC7YDL087C AAD16Q02895 342 aa13.7□□□□□ -0.22
LUC7YDL087C PRY3P47033 881 aa13.69□□□□□ -0.22
LUC7YDL087C ISW2Q08773 1120 aa13.68□□□□□ -0.22
LUC7YDL087C RPG1P38249 964 aaKnown RBP13.52□□□□□ -0.25
LUC7YDL087C AVT3P36062 692 aa13.3□□□□□ -0.28
LUC7YDL087C BFR2Q06631 534 aaKnown RBP13.23□□□□□ -0.29
LUC7YDL087C RSE1Q04693 1361 aaKnown RBP13.19□□□□□ -0.3
LUC7YDL087C TSR3Q12094 313 aaKnown RBP13.06□□□□□ -0.32
LUC7YDL087C YCK3P39962 524 aa12.93□□□□□ -0.34
LUC7YDL087C HAA1Q12753 694 aaKnown RBP12.89□□□□□ -0.35
LUC7YDL087C RPL17AP05740 184 aaKnown RBP12.74□□□□□ -0.37
LUC7YDL087C RPL17BP46990 184 aaKnown RBP12.74□□□□□ -0.37
LUC7YDL087C REB1P21538 810 aa12.66□□□□□ -0.38
LUC7YDL087C MRPL32P25348 183 aa12.57□□□□□ -0.4
LUC7YDL087C SPT21P35209 758 aa12.21□□□□□ -0.45
LUC7YDL087C YKR023WP36119 530 aaKnown RBP12.02□□□□□ -0.49
LUC7YDL087C YGL015CP33199 130 aa11.98□□□□□ -0.49
LUC7YDL087C CDC27P38042 758 aa11.97□□□□□ -0.49
LUC7YDL087C RIM101P33400 625 aa11.86□□□□□ -0.51
LUC7YDL087C TFA1P36100 482 aa11.86□□□□□ -0.51
LUC7YDL087C TFC8Q12308 588 aa11.78□□□□□ -0.52
LUC7YDL087C HOP09932 586 aa11.76□□□□□ -0.53
LUC7YDL087C DCD1P06773 312 aa11.68□□□□□ -0.54
LUC7YDL087C UBP10P53874 792 aaPredicted RBP11.62□□□□□ -0.55
LUC7YDL087C MAP2P38174 421 aaKnown RBP11.57□□□□□ -0.56
LUC7YDL087C OXP1P28273 1286 aa11.46□□□□□ -0.57
LUC7YDL087C BCH2P36122 765 aa11.4□□□□□ -0.58
LUC7YDL087C SCY1P53009 804 aa11.39□□□□□ -0.59
LUC7YDL087C YIL055CP40523 627 aaKnown RBP11.31□□□□□ -0.6
LUC7YDL087C PTP3P40048 928 aa11.27□□□□□ -0.61
LUC7YDL087C SLX5P32828 619 aaKnown RBP11.24□□□□□ -0.61
LUC7YDL087C TIF4632P39936 914 aaKnown RBP11.15□□□□□ -0.62
LUC7YDL087C YAH1Q12184 172 aaKnown RBP11.15□□□□□ -0.62
LUC7YDL087C RSM7P47150 247 aa11.14□□□□□ -0.63
LUC7YDL087C EPS1P40557 701 aa11.13□□□□□ -0.63
LUC7YDL087C TGL3P40308 642 aa11.1□□□□□ -0.63
LUC7YDL087C BDF1P35817 686 aa11.08□□□□□ -0.64
LUC7YDL087C AI2P03876 854 aa11.01□□□□□ -0.65
LUC7YDL087C BBC1P47068 1157 aa11.01□□□□□ -0.65
LUC7YDL087C YLR271WQ06152 274 aa11□□□□□ -0.65
LUC7YDL087C SSP1P38871 571 aa10.93□□□□□ -0.66
LUC7YDL087C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.86□□□□□ -0.67not detected
LUC7YDL087C BUD31P25337 157 aaPredicted RBP10.84□□□□□ -0.67
LUC7YDL087C PSD2P53037 1138 aaKnown RBP10.81□□□□□ -0.68
LUC7YDL087C NSR1P27476 414 aaKnown RBP RIP-Chip data10.7□□□□□ -0.7not detected
LUC7YDL087C MST1P07236 462 aa10.67□□□□□ -0.7
LUC7YDL087C UBP9P39967 754 aa10.67□□□□□ -0.7
LUC7YDL087C MGA2P40578 1113 aa10.66□□□□□ -0.7
LUC7YDL087C YOR238WQ08634 303 aa10.65□□□□□ -0.7
LUC7YDL087C MRM1P25270 412 aa10.62□□□□□ -0.71
LUC7YDL087C YAP5P40574 245 aa10.62□□□□□ -0.71
LUC7YDL087C CST9Q06032 482 aa10.61□□□□□ -0.71
LUC7YDL087C RTG3P38165 486 aa10.43□□□□□ -0.74
LUC7YDL087C YBL029C-AQ3E756 94 aa10.42□□□□□ -0.74
LUC7YDL087C VPS29P38759 282 aa10.39□□□□□ -0.75
LUC7YDL087C PIB1Q06651 286 aa10.37□□□□□ -0.75
LUC7YDL087C SIS1P25294 352 aaKnown RBP10.36□□□□□ -0.75
LUC7YDL087C GTT3P39996 337 aa10.36□□□□□ -0.75
LUC7YDL087C YMR1P47147 688 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
LUC7YDL087C VNX1P42839 908 aa10.34□□□□□ -0.75
LUC7YDL087C RCR1P38212 213 aa10.32□□□□□ -0.76
LUC7YDL087C WSC3Q12215 556 aa10.32□□□□□ -0.76
LUC7YDL087C DBP1P24784 617 aaKnown RBP10.3□□□□□ -0.76
LUC7YDL087C STS1P38637 319 aa10.27□□□□□ -0.77
LUC7YDL087C YFR006WP43590 535 aa10.26□□□□□ -0.77
LUC7YDL087C SPP1Q03012 353 aa10.25□□□□□ -0.77
LUC7YDL087C TIF11P38912 153 aaKnown RBP10.19□□□□□ -0.78
LUC7YDL087C VMA1P17255 1071 aaKnown RBP10.17□□□□□ -0.78
LUC7YDL087C MSB4Q12317 492 aa10.14□□□□□ -0.79
LUC7YDL087C RAM2P29703 316 aa10.11□□□□□ -0.79
LUC7YDL087C YOL036WQ08206 761 aa10.11□□□□□ -0.79
LUC7YDL087C SAM3Q08986 587 aa10.11□□□□□ -0.79
LUC7YDL087C ULI1P43604 169 aa10.1□□□□□ -0.79
LUC7YDL087C SET4P42948 560 aa10.09□□□□□ -0.79
LUC7YDL087C EAP1P36041 632 aaKnown RBP10.07□□□□□ -0.8
LUC7YDL087C MAK11P20484 414 aaKnown RBP10.06□□□□□ -0.8
LUC7YDL087C IOC2Q12072 812 aa10.05□□□□□ -0.8
LUC7YDL087C LDB19Q12502 818 aa10.02□□□□□ -0.81
LUC7YDL087C FKH1P40466 484 aa9.99□□□□□ -0.81
LUC7YDL087C TRP5P00931 707 aaKnown RBP9.98□□□□□ -0.81
LUC7YDL087C GYP5Q12344 894 aa9.98□□□□□ -0.81
LUC7YDL087C AIR2Q12476 344 aaKnown RBP9.97□□□□□ -0.81
LUC7YDL087C MIF2P35201 549 aa9.96□□□□□ -0.82
LUC7YDL087C ABP1P15891 592 aaKnown RBP9.95□□□□□ -0.82
LUC7YDL087C COQ8P27697 501 aa9.91□□□□□ -0.82
LUC7YDL087C EDS1P38073 919 aa9.91□□□□□ -0.82
LUC7YDL087C RTG1P32607 177 aa9.89□□□□□ -0.83
LUC7YDL087C GRE2Q12068 342 aaKnown RBP9.89□□□□□ -0.83
LUC7YDL087C HTA1P04911 132 aaKnown RBP9.88□□□□□ -0.83
LUC7YDL087C HTA2P04912 132 aa9.88□□□□□ -0.83
LUC7YDL087C PTC3P34221 468 aaKnown RBP9.88□□□□□ -0.83
LUC7YDL087C DCW1P36091 449 aa9.88□□□□□ -0.83
LUC7YDL087C YNL035CP53962 389 aaKnown RBP9.88□□□□□ -0.83
LUC7YDL087C YJL171CP46992 396 aa9.87□□□□□ -0.83
LUC7YDL087C SEC61P32915 480 aa9.83□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms