RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C FAP1P53971 965 aa3.91□□□□□ -1.78
MSH3YCR092C MTC1P47018 478 aaKnown RBP3.87□□□□□ -1.79
MSH3YCR092C DRS1P32892 752 aaKnown RBP3.68□□□□□ -1.82
MSH3YCR092C MON2P48563 1636 aaPredicted RBP3.66□□□□□ -1.82
MSH3YCR092C PRY3P47033 881 aa3.57□□□□□ -1.84
MSH3YCR092C INO80P53115 1489 aa3.51□□□□□ -1.85
MSH3YCR092C TCB3Q03640 1545 aaKnown RBP3.47□□□□□ -1.85
MSH3YCR092C TY1B-DR4Q07793 1604 aa3.46□□□□□ -1.86
MSH3YCR092C KOG1P38873 1557 aa3.39□□□□□ -1.87
MSH3YCR092C ISW2Q08773 1120 aa3.38□□□□□ -1.87
MSH3YCR092C SWR1Q05471 1514 aa3.36□□□□□ -1.87
MSH3YCR092C AAD16Q02895 342 aa3.34□□□□□ -1.87
MSH3YCR092C PRI1P10363 409 aa3.33□□□□□ -1.88
MSH3YCR092C THO2P53552 1597 aaKnown RBP3.29□□□□□ -1.88
MSH3YCR092C HAA1Q12753 694 aaKnown RBP3.25□□□□□ -1.89
MSH3YCR092C DNA2P38859 1522 aa3.24□□□□□ -1.89
MSH3YCR092C REB1P21538 810 aa3.23□□□□□ -1.89
MSH3YCR092C RPG1P38249 964 aaKnown RBP3.23□□□□□ -1.89
MSH3YCR092C SSK2P53599 1579 aa3.23□□□□□ -1.89
MSH3YCR092C MRPL32P25348 183 aa3.22□□□□□ -1.89
MSH3YCR092C SPT6P23615 1451 aaKnown RBP3.22□□□□□ -1.89
MSH3YCR092C YCK3P39962 524 aa3.21□□□□□ -1.9
MSH3YCR092C HSL1P34244 1518 aa3.18□□□□□ -1.9
MSH3YCR092C RSE1Q04693 1361 aaKnown RBP3.18□□□□□ -1.9
MSH3YCR092C SIN3P22579 1536 aa3.17□□□□□ -1.9
MSH3YCR092C PEP1P32319 1579 aa3.16□□□□□ -1.9
MSH3YCR092C TSR3Q12094 313 aaKnown RBP3.16□□□□□ -1.9
MSH3YCR092C DIP2Q12220 943 aaPredicted RBP3.13□□□□□ -1.91
MSH3YCR092C SGS1P35187 1447 aa3.13□□□□□ -1.91
MSH3YCR092C BFR2Q06631 534 aaKnown RBP3.13□□□□□ -1.91
MSH3YCR092C RPL17AP05740 184 aaKnown RBP3.1□□□□□ -1.91
MSH3YCR092C RPL17BP46990 184 aaKnown RBP3.1□□□□□ -1.91
MSH3YCR092C HIR3P47171 1648 aa3.1□□□□□ -1.91
MSH3YCR092C BUD4P47136 1447 aa3.09□□□□□ -1.91
MSH3YCR092C SPA2P23201 1466 aaKnown RBP3.08□□□□□ -1.92
MSH3YCR092C REV3P14284 1504 aa3.07□□□□□ -1.92
MSH3YCR092C MDS3P53094 1487 aa3.06□□□□□ -1.92
MSH3YCR092C ATG2P53855 1592 aa3.06□□□□□ -1.92
MSH3YCR092C MYO2P19524 1574 aaKnown RBP3.02□□□□□ -1.93
MSH3YCR092C MET5P47169 1442 aa3.01□□□□□ -1.93
MSH3YCR092C ESP1Q03018 1630 aa2.99□□□□□ -1.93
MSH3YCR092C YGL015CP33199 130 aa2.98□□□□□ -1.93
MSH3YCR092C AVT3P36062 692 aa2.98□□□□□ -1.93
MSH3YCR092C XRN1P22147 1528 aaKnown RBP2.98□□□□□ -1.93
MSH3YCR092C BPT1P14772 1559 aa2.98□□□□□ -1.93
MSH3YCR092C YPK9Q12697 1472 aa2.97□□□□□ -1.93
MSH3YCR092C YCF1P39109 1515 aaKnown RBP2.96□□□□□ -1.93
MSH3YCR092C LTE1P07866 1435 aa2.95□□□□□ -1.94
MSH3YCR092C ECM5Q03214 1411 aa2.95□□□□□ -1.94
MSH3YCR092C ESC1Q03661 1658 aaKnown RBP2.94□□□□□ -1.94
MSH3YCR092C RPO31P04051 1460 aa2.94□□□□□ -1.94
MSH3YCR092C HAP1P0CE41 1502 aa2.93□□□□□ -1.94
MSH3YCR092C DNF1P32660 1571 aa2.92□□□□□ -1.94
MSH3YCR092C RKR1Q04781 1562 aa2.92□□□□□ -1.94
MSH3YCR092C TY1B-BRQ12193 1756 aa2.91□□□□□ -1.94
MSH3YCR092C TY1B-GR3Q12316 1755 aa2.91□□□□□ -1.94
MSH3YCR092C TY1B-ORQ92393 1755 aa2.91□□□□□ -1.94
MSH3YCR092C CDC25P04821 1589 aa2.9□□□□□ -1.95
MSH3YCR092C IRC20Q06554 1556 aa2.89□□□□□ -1.95
MSH3YCR092C SSN2P38931 1420 aa2.89□□□□□ -1.95
MSH3YCR092C RPA190P10964 1664 aaKnown RBP2.89□□□□□ -1.95
MSH3YCR092C SCC2Q04002 1493 aa2.89□□□□□ -1.95
MSH3YCR092C TY1B-HO13535 1793 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-DR5P0C2I2 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-DR6P0C2I3 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-LR2P0C2I5 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-LR3P0C2I6 1755 aaKnown RBP2.88□□□□□ -1.95
MSH3YCR092C TY1B-PR1P0C2I9 1755 aaKnown RBP2.88□□□□□ -1.95
MSH3YCR092C TY1B-PR2P0C2J0 1756 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-PR3P0C2J1 1755 aaKnown RBP2.88□□□□□ -1.95
MSH3YCR092C TY1B-JR1P47098 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-ML2Q03434 1755 aaKnown RBP2.88□□□□□ -1.95
MSH3YCR092C TY1B-ER1Q03612 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-ML1Q04711 1755 aaKnown RBP2.88□□□□□ -1.95
MSH3YCR092C TY1B-GR2Q12269 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-OLQ12273 1755 aa2.88□□□□□ -1.95
MSH3YCR092C TY1B-PLQ12414 1755 aaKnown RBP2.88□□□□□ -1.95
MSH3YCR092C TY2B-LR1P0C2J3 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-FP0CX63 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-GR2P0CX64 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-CP25384 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-DR2Q03494 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY1B-DR1Q03855 1755 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-DR3Q07791 1770 aaKnown RBP2.87□□□□□ -1.95
MSH3YCR092C TY2B-OR1Q12113 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-DR1Q12472 1770 aa2.87□□□□□ -1.95
MSH3YCR092C TY2B-OR2Q12501 1770 aa2.87□□□□□ -1.95
MSH3YCR092C YIL055CP40523 627 aaKnown RBP2.87□□□□□ -1.95
MSH3YCR092C TIF4632P39936 914 aaKnown RBP2.86□□□□□ -1.95
MSH3YCR092C TAF2P23255 1407 aa2.86□□□□□ -1.95
MSH3YCR092C SMC4Q12267 1418 aa2.85□□□□□ -1.95
MSH3YCR092C TOP2P06786 1428 aaKnown RBP2.85□□□□□ -1.95
MSH3YCR092C TRM3Q07527 1436 aa2.85□□□□□ -1.95
MSH3YCR092C UBP9P39967 754 aa2.84□□□□□ -1.95
MSH3YCR092C PAN1P32521 1480 aa2.84□□□□□ -1.95
MSH3YCR092C SNT2P53127 1403 aa2.84□□□□□ -1.95
MSH3YCR092C TY2B-BQ12491 1770 aa2.84□□□□□ -1.95
MSH3YCR092C CDC27P38042 758 aa2.84□□□□□ -1.95
MSH3YCR092C CHD1P32657 1468 aa2.84□□□□□ -1.96
MSH3YCR092C SIS1P25294 352 aaKnown RBP2.84□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms