RNA–Protein interactions for RNA: YCR086W

CSM1, Transcript of Nucleolar protein that mediates homolog segregation during meiosis I, yeastyeast

Gene CSM1, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM1YCR086W SGS1P35187 1447 aa17.12■□□□□ 0.33
CSM1YCR086W INO80P53115 1489 aa17■□□□□ 0.31
CSM1YCR086W MON2P48563 1636 aaPredicted RBP17■□□□□ 0.31
CSM1YCR086W TCB3Q03640 1545 aaKnown RBP16.8■□□□□ 0.28
CSM1YCR086W TY1B-DR4Q07793 1604 aa16.67■□□□□ 0.26
CSM1YCR086W SWR1Q05471 1514 aa16.52■□□□□ 0.24
CSM1YCR086W HSL1P34244 1518 aa16.29■□□□□ 0.2
CSM1YCR086W SPT6P23615 1451 aaKnown RBP16.24■□□□□ 0.19
CSM1YCR086W DNA2P38859 1522 aa16.24■□□□□ 0.19
CSM1YCR086W SSN2P38931 1420 aa16.13■□□□□ 0.17
CSM1YCR086W SPA2P23201 1466 aaKnown RBP16.12■□□□□ 0.17
CSM1YCR086W KOG1P38873 1557 aa16.04■□□□□ 0.16
CSM1YCR086W HIR3P47171 1648 aa15.98■□□□□ 0.15
CSM1YCR086W XRN1P22147 1528 aaKnown RBP15.82■□□□□ 0.12
CSM1YCR086W DRS1P32892 752 aaKnown RBP15.64■□□□□ 0.09
CSM1YCR086W ECM5Q03214 1411 aa15.62■□□□□ 0.09
CSM1YCR086W BUD4P47136 1447 aa15.56■□□□□ 0.08
CSM1YCR086W REV3P14284 1504 aa15.55■□□□□ 0.08
CSM1YCR086W THO2P53552 1597 aaKnown RBP15.53■□□□□ 0.08
CSM1YCR086W TAF2P23255 1407 aa15.43■□□□□ 0.06
CSM1YCR086W MTC1P47018 478 aaKnown RBP15.42■□□□□ 0.06
CSM1YCR086W SIN3P22579 1536 aa15.37■□□□□ 0.05
CSM1YCR086W MDS3P53094 1487 aa15.34■□□□□ 0.05
CSM1YCR086W ATG2P53855 1592 aa15.32■□□□□ 0.04
CSM1YCR086W SSK2P53599 1579 aa15.28■□□□□ 0.04
CSM1YCR086W PEP1P32319 1579 aa15.28■□□□□ 0.04
CSM1YCR086W RSE1Q04693 1361 aaKnown RBP15.24■□□□□ 0.03
CSM1YCR086W SKI3P17883 1432 aaKnown RBP15.23■□□□□ 0.03
CSM1YCR086W FAP1P53971 965 aa15.22■□□□□ 0.03
CSM1YCR086W ESP1Q03018 1630 aa15.17■□□□□ 0.02
CSM1YCR086W MYO2P19524 1574 aaKnown RBP15.02■□□□□ -0
CSM1YCR086W YPK9Q12697 1472 aa14.97□□□□□ -0.01
CSM1YCR086W SCC2Q04002 1493 aa14.9□□□□□ -0.02
CSM1YCR086W UFD4P33202 1483 aa14.88□□□□□ -0.03
CSM1YCR086W BPT1P14772 1559 aa14.87□□□□□ -0.03
CSM1YCR086W RPO31P04051 1460 aa14.81□□□□□ -0.04
CSM1YCR086W POL1P13382 1468 aa14.76□□□□□ -0.05
CSM1YCR086W STU1P38198 1513 aa14.7□□□□□ -0.06
CSM1YCR086W YCF1P39109 1515 aaKnown RBP14.69□□□□□ -0.06
CSM1YCR086W RKR1Q04781 1562 aa14.68□□□□□ -0.06
CSM1YCR086W TY2B-LR1P0C2J3 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-FP0CX63 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-GR2P0CX64 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-CP25384 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-DR2Q03494 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY1B-DR1Q03855 1755 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-DR3Q07791 1770 aaKnown RBP14.67□□□□□ -0.06
CSM1YCR086W TY2B-OR1Q12113 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-DR1Q12472 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TY2B-OR2Q12501 1770 aa14.67□□□□□ -0.06
CSM1YCR086W TOP2P06786 1428 aaKnown RBP14.66□□□□□ -0.06
CSM1YCR086W YOR1P53049 1477 aa14.58□□□□□ -0.08
CSM1YCR086W RQC2Q12532 1038 aaKnown RBP14.58□□□□□ -0.08
CSM1YCR086W TY1B-DR3Q99231 1755 aa14.53□□□□□ -0.08
CSM1YCR086W CHD1P32657 1468 aa14.52□□□□□ -0.08
CSM1YCR086W TY2B-BQ12491 1770 aa14.52□□□□□ -0.09
CSM1YCR086W SMC4Q12267 1418 aa14.51□□□□□ -0.09
CSM1YCR086W TY1B-BRQ12193 1756 aa14.51□□□□□ -0.09
CSM1YCR086W TY1B-GR3Q12316 1755 aa14.51□□□□□ -0.09
CSM1YCR086W TY1B-ORQ92393 1755 aa14.51□□□□□ -0.09
CSM1YCR086W CDC25P04821 1589 aa14.5□□□□□ -0.09
CSM1YCR086W YTA7P40340 1379 aa14.45□□□□□ -0.1
CSM1YCR086W TY1B-HO13535 1793 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-DR5P0C2I2 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-DR6P0C2I3 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-LR2P0C2I5 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-LR3P0C2I6 1755 aaKnown RBP14.43□□□□□ -0.1
CSM1YCR086W TY1B-PR1P0C2I9 1755 aaKnown RBP14.43□□□□□ -0.1
CSM1YCR086W TY1B-PR2P0C2J0 1756 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-PR3P0C2J1 1755 aaKnown RBP14.43□□□□□ -0.1
CSM1YCR086W TY1B-JR1P47098 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-ML2Q03434 1755 aaKnown RBP14.43□□□□□ -0.1
CSM1YCR086W TY1B-ER1Q03612 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-ML1Q04711 1755 aaKnown RBP14.43□□□□□ -0.1
CSM1YCR086W TY1B-GR2Q12269 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-OLQ12273 1755 aa14.43□□□□□ -0.1
CSM1YCR086W TY1B-PLQ12414 1755 aaKnown RBP14.43□□□□□ -0.1
CSM1YCR086W PAN1P32521 1480 aa14.42□□□□□ -0.1
CSM1YCR086W MMS22Q06164 1454 aa14.42□□□□□ -0.1
CSM1YCR086W DNF1P32660 1571 aa14.37□□□□□ -0.11
CSM1YCR086W SPP41P38904 1435 aa14.36□□□□□ -0.11
CSM1YCR086W ESC1Q03661 1658 aaKnown RBP14.36□□□□□ -0.11
CSM1YCR086W MYO4P32492 1471 aa14.34□□□□□ -0.11
CSM1YCR086W PRY3P47033 881 aa14.34□□□□□ -0.11
CSM1YCR086W SAS10Q12136 610 aaPredicted RBP14.26□□□□□ -0.13
CSM1YCR086W RPA190P10964 1664 aaKnown RBP14.26□□□□□ -0.13
CSM1YCR086W TSC11P40061 1430 aa14.24□□□□□ -0.13
CSM1YCR086W TRM732Q03496 1420 aa14.24□□□□□ -0.13
CSM1YCR086W VTH1P40438 1549 aa14.23□□□□□ -0.13
CSM1YCR086W VTH2P40890 1549 aa14.23□□□□□ -0.13
CSM1YCR086W TY1B-JR2P47100 1755 aaKnown RBP14.17□□□□□ -0.14
CSM1YCR086W TY1B-ER2Q03619 1755 aa14.17□□□□□ -0.14
CSM1YCR086W TY1B-MR1Q04214 1755 aa14.17□□□□□ -0.14
CSM1YCR086W TY1B-MR2Q04670 1755 aaKnown RBP14.17□□□□□ -0.14
CSM1YCR086W TY1B-LR1Q12088 1755 aaKnown RBP14.17□□□□□ -0.14
CSM1YCR086W TY1B-NL1Q12112 1755 aa14.17□□□□□ -0.14
CSM1YCR086W TY1B-GR1Q12141 1755 aa14.17□□□□□ -0.14
CSM1YCR086W TY1B-BLQ12490 1755 aa14.17□□□□□ -0.14
CSM1YCR086W SNQ2P32568 1501 aaKnown RBP14.17□□□□□ -0.14
CSM1YCR086W STH1P32597 1359 aa14.15□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms