RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeastyeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APM3YBR288C MTC1P47018 478 aaKnown RBP16.14■□□□□ 0.17
APM3YBR288C DRS1P32892 752 aaKnown RBP15.46■□□□□ 0.06
APM3YBR288C FAP1P53971 965 aa14.16□□□□□ -0.14
APM3YBR288C DIP2Q12220 943 aaPredicted RBP13.42□□□□□ -0.26
APM3YBR288C PRI1P10363 409 aa13.4□□□□□ -0.26
APM3YBR288C ISW2Q08773 1120 aa13.3□□□□□ -0.28
APM3YBR288C PRY3P47033 881 aa13.29□□□□□ -0.28
APM3YBR288C AAD16Q02895 342 aa13.28□□□□□ -0.28
APM3YBR288C RPG1P38249 964 aaKnown RBP13.17□□□□□ -0.3
APM3YBR288C BFR2Q06631 534 aaKnown RBP13.02□□□□□ -0.33
APM3YBR288C AVT3P36062 692 aa13.01□□□□□ -0.33
APM3YBR288C RSE1Q04693 1361 aaKnown RBP12.86□□□□□ -0.35
APM3YBR288C TSR3Q12094 313 aaKnown RBP12.72□□□□□ -0.37
APM3YBR288C YCK3P39962 524 aa12.53□□□□□ -0.4
APM3YBR288C RPL17AP05740 184 aaKnown RBP12.46□□□□□ -0.42
APM3YBR288C RPL17BP46990 184 aaKnown RBP12.46□□□□□ -0.42
APM3YBR288C HAA1Q12753 694 aaKnown RBP12.45□□□□□ -0.42
APM3YBR288C REB1P21538 810 aa12.36□□□□□ -0.43
APM3YBR288C MRPL32P25348 183 aa12.21□□□□□ -0.46
APM3YBR288C SPT21P35209 758 aa11.9□□□□□ -0.5
APM3YBR288C YKR023WP36119 530 aaKnown RBP11.71□□□□□ -0.53
APM3YBR288C TFA1P36100 482 aa11.69□□□□□ -0.54
APM3YBR288C CDC27P38042 758 aa11.66□□□□□ -0.54
APM3YBR288C YGL015CP33199 130 aa11.59□□□□□ -0.55
APM3YBR288C RIM101P33400 625 aa11.57□□□□□ -0.56
APM3YBR288C HOP09932 586 aa11.5□□□□□ -0.57
APM3YBR288C TFC8Q12308 588 aa11.47□□□□□ -0.57
APM3YBR288C DCD1P06773 312 aa11.44□□□□□ -0.58
APM3YBR288C MAP2P38174 421 aaKnown RBP11.25□□□□□ -0.61
APM3YBR288C UBP10P53874 792 aaPredicted RBP11.25□□□□□ -0.61
APM3YBR288C OXP1P28273 1286 aa11.22□□□□□ -0.61
APM3YBR288C BCH2P36122 765 aa11.12□□□□□ -0.63
APM3YBR288C SCY1P53009 804 aa11.1□□□□□ -0.63
APM3YBR288C YIL055CP40523 627 aaKnown RBP11.06□□□□□ -0.64
APM3YBR288C PTP3P40048 928 aa11.04□□□□□ -0.64
APM3YBR288C YAH1Q12184 172 aaKnown RBP10.97□□□□□ -0.65
APM3YBR288C SLX5P32828 619 aaKnown RBP10.93□□□□□ -0.66
APM3YBR288C RSM7P47150 247 aa10.88□□□□□ -0.67
APM3YBR288C EPS1P40557 701 aa10.87□□□□□ -0.67
APM3YBR288C BDF1P35817 686 aa10.81□□□□□ -0.68
APM3YBR288C TIF4632P39936 914 aaKnown RBP10.81□□□□□ -0.68
APM3YBR288C YLR271WQ06152 274 aa10.77□□□□□ -0.69
APM3YBR288C AI2P03876 854 aa10.76□□□□□ -0.69
APM3YBR288C TGL3P40308 642 aa10.74□□□□□ -0.69
APM3YBR288C BBC1P47068 1157 aa10.74□□□□□ -0.69
APM3YBR288C SSP1P38871 571 aa10.73□□□□□ -0.69
APM3YBR288C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71not detected
APM3YBR288C PSD2P53037 1138 aaKnown RBP10.55□□□□□ -0.72
APM3YBR288C BUD31P25337 157 aaPredicted RBP10.44□□□□□ -0.74
APM3YBR288C MGA2P40578 1113 aa10.42□□□□□ -0.74
APM3YBR288C CST9Q06032 482 aa10.42□□□□□ -0.74
APM3YBR288C MRM1P25270 412 aa10.4□□□□□ -0.74
APM3YBR288C NSR1P27476 414 aaKnown RBP RIP-Chip data10.35□□□□□ -0.75not detected
APM3YBR288C YOR238WQ08634 303 aa10.34□□□□□ -0.75
APM3YBR288C MST1P07236 462 aa10.31□□□□□ -0.76
APM3YBR288C YAP5P40574 245 aa10.31□□□□□ -0.76
APM3YBR288C UBP9P39967 754 aa10.3□□□□□ -0.76
APM3YBR288C RTG3P38165 486 aa10.19□□□□□ -0.78
APM3YBR288C PIB1Q06651 286 aa10.17□□□□□ -0.78
APM3YBR288C VPS29P38759 282 aa10.15□□□□□ -0.78
APM3YBR288C RCR1P38212 213 aa10.14□□□□□ -0.79
APM3YBR288C YBL029C-AQ3E756 94 aa10.13□□□□□ -0.79
APM3YBR288C YMR1P47147 688 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
APM3YBR288C GTT3P39996 337 aa10.09□□□□□ -0.79
APM3YBR288C DBP1P24784 617 aaKnown RBP10.07□□□□□ -0.8
APM3YBR288C WSC3Q12215 556 aa10.06□□□□□ -0.8
APM3YBR288C YFR006WP43590 535 aa10.05□□□□□ -0.8
APM3YBR288C STS1P38637 319 aa10.04□□□□□ -0.8
APM3YBR288C VNX1P42839 908 aa10.04□□□□□ -0.8
APM3YBR288C SIS1P25294 352 aaKnown RBP10.01□□□□□ -0.81
APM3YBR288C SPP1Q03012 353 aa9.95□□□□□ -0.82
APM3YBR288C RAM2P29703 316 aa9.92□□□□□ -0.82
APM3YBR288C VMA1P17255 1071 aaKnown RBP9.91□□□□□ -0.82
APM3YBR288C TIF11P38912 153 aaKnown RBP9.88□□□□□ -0.83
APM3YBR288C SET4P42948 560 aa9.85□□□□□ -0.83
APM3YBR288C YOL036WQ08206 761 aa9.85□□□□□ -0.83
APM3YBR288C MAK11P20484 414 aaKnown RBP9.83□□□□□ -0.84
APM3YBR288C MSB4Q12317 492 aa9.83□□□□□ -0.84
APM3YBR288C SAM3Q08986 587 aa9.82□□□□□ -0.84
APM3YBR288C ULI1P43604 169 aa9.81□□□□□ -0.84
APM3YBR288C MIF2P35201 549 aa9.77□□□□□ -0.85
APM3YBR288C EAP1P36041 632 aaKnown RBP9.76□□□□□ -0.85
APM3YBR288C IOC2Q12072 812 aa9.75□□□□□ -0.85
APM3YBR288C GYP5Q12344 894 aa9.73□□□□□ -0.85
APM3YBR288C LDB19Q12502 818 aa9.73□□□□□ -0.85
APM3YBR288C TRP5P00931 707 aaKnown RBP9.72□□□□□ -0.85
APM3YBR288C EDS1P38073 919 aa9.71□□□□□ -0.86
APM3YBR288C COQ8P27697 501 aa9.7□□□□□ -0.86
APM3YBR288C DCW1P36091 449 aa9.66□□□□□ -0.86
APM3YBR288C FKH1P40466 484 aa9.66□□□□□ -0.86
APM3YBR288C PTC3P34221 468 aaKnown RBP9.65□□□□□ -0.87
APM3YBR288C GRE2Q12068 342 aaKnown RBP9.65□□□□□ -0.87
APM3YBR288C AIR2Q12476 344 aaKnown RBP9.65□□□□□ -0.87
APM3YBR288C ABP1P15891 592 aaKnown RBP9.64□□□□□ -0.87
APM3YBR288C HTA1P04911 132 aaKnown RBP9.62□□□□□ -0.87
APM3YBR288C HTA2P04912 132 aa9.62□□□□□ -0.87
APM3YBR288C RTG1P32607 177 aa9.61□□□□□ -0.87
APM3YBR288C ATH1P48016 1211 aa9.59□□□□□ -0.87
APM3YBR288C YNL035CP53962 389 aaKnown RBP9.59□□□□□ -0.87
APM3YBR288C YJL171CP46992 396 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms