RNA–Protein interactions for RNA: YBR286W

APE3, Transcript of Vacuolar aminopeptidase Y, yeastyeast

Gene APE3, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE3YBR286W SGS1P35187 1447 aa10.74□□□□□ -0.69
APE3YBR286W INO80P53115 1489 aa10.58□□□□□ -0.72
APE3YBR286W MON2P48563 1636 aaPredicted RBP10.55□□□□□ -0.72
APE3YBR286W TCB3Q03640 1545 aaKnown RBP10.51□□□□□ -0.73
APE3YBR286W TY1B-DR4Q07793 1604 aa10.48□□□□□ -0.73
APE3YBR286W SWR1Q05471 1514 aa10.27□□□□□ -0.76
APE3YBR286W HSL1P34244 1518 aa10.23□□□□□ -0.77
APE3YBR286W SSN2P38931 1420 aa10.22□□□□□ -0.77
APE3YBR286W SPA2P23201 1466 aaKnown RBP10.22□□□□□ -0.77
APE3YBR286W SPT6P23615 1451 aaKnown RBP10.17□□□□□ -0.78
APE3YBR286W HIR3P47171 1648 aa10.03□□□□□ -0.8
APE3YBR286W DNA2P38859 1522 aa10□□□□□ -0.81
APE3YBR286W KOG1P38873 1557 aa9.93□□□□□ -0.82
APE3YBR286W XRN1P22147 1528 aaKnown RBP9.91□□□□□ -0.82
APE3YBR286W DRS1P32892 752 aaKnown RBP9.8□□□□□ -0.84
APE3YBR286W REV3P14284 1504 aa9.79□□□□□ -0.84
APE3YBR286W THO2P53552 1597 aaKnown RBP9.73□□□□□ -0.85
APE3YBR286W SIN3P22579 1536 aa9.73□□□□□ -0.85
APE3YBR286W BUD4P47136 1447 aa9.69□□□□□ -0.86
APE3YBR286W SSK2P53599 1579 aa9.67□□□□□ -0.86
APE3YBR286W ECM5Q03214 1411 aa9.66□□□□□ -0.86
APE3YBR286W ATG2P53855 1592 aa9.64□□□□□ -0.87
APE3YBR286W TAF2P23255 1407 aa9.61□□□□□ -0.87
APE3YBR286W ESP1Q03018 1630 aa9.6□□□□□ -0.87
APE3YBR286W PEP1P32319 1579 aa9.57□□□□□ -0.88
APE3YBR286W MDS3P53094 1487 aa9.56□□□□□ -0.88
APE3YBR286W MYO2P19524 1574 aaKnown RBP9.51□□□□□ -0.89
APE3YBR286W SKI3P17883 1432 aaKnown RBP9.47□□□□□ -0.89
APE3YBR286W YPK9Q12697 1472 aa9.42□□□□□ -0.9
APE3YBR286W SCC2Q04002 1493 aa9.37□□□□□ -0.91
APE3YBR286W POL1P13382 1468 aa9.33□□□□□ -0.92
APE3YBR286W RPO31P04051 1460 aa9.3□□□□□ -0.92
APE3YBR286W TY2B-LR1P0C2J3 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-FP0CX63 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-GR2P0CX64 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-CP25384 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-DR2Q03494 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY1B-DR1Q03855 1755 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-DR3Q07791 1770 aaKnown RBP9.29□□□□□ -0.92
APE3YBR286W TY2B-OR1Q12113 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-DR1Q12472 1770 aa9.29□□□□□ -0.92
APE3YBR286W TY2B-OR2Q12501 1770 aa9.29□□□□□ -0.92
APE3YBR286W UFD4P33202 1483 aa9.28□□□□□ -0.92
APE3YBR286W STU1P38198 1513 aa9.28□□□□□ -0.92
APE3YBR286W RKR1Q04781 1562 aa9.27□□□□□ -0.92
APE3YBR286W YCF1P39109 1515 aaKnown RBP9.25□□□□□ -0.93
APE3YBR286W BPT1P14772 1559 aa9.25□□□□□ -0.93
APE3YBR286W TY1B-DR3Q99231 1755 aa9.23□□□□□ -0.93
APE3YBR286W RSE1Q04693 1361 aaKnown RBP9.21□□□□□ -0.93
APE3YBR286W YOR1P53049 1477 aa9.2□□□□□ -0.94
APE3YBR286W TY2B-BQ12491 1770 aa9.2□□□□□ -0.94
APE3YBR286W TOP2P06786 1428 aaKnown RBP9.2□□□□□ -0.94
APE3YBR286W TY1B-BRQ12193 1756 aa9.17□□□□□ -0.94
APE3YBR286W TY1B-GR3Q12316 1755 aa9.17□□□□□ -0.94
APE3YBR286W TY1B-ORQ92393 1755 aa9.17□□□□□ -0.94
APE3YBR286W TY1B-HO13535 1793 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-DR5P0C2I2 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-DR6P0C2I3 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-LR2P0C2I5 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-LR3P0C2I6 1755 aaKnown RBP9.15□□□□□ -0.95
APE3YBR286W TY1B-PR1P0C2I9 1755 aaKnown RBP9.15□□□□□ -0.95
APE3YBR286W TY1B-PR2P0C2J0 1756 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-PR3P0C2J1 1755 aaKnown RBP9.15□□□□□ -0.95
APE3YBR286W TY1B-JR1P47098 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-ML2Q03434 1755 aaKnown RBP9.15□□□□□ -0.95
APE3YBR286W TY1B-ER1Q03612 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-ML1Q04711 1755 aaKnown RBP9.15□□□□□ -0.95
APE3YBR286W TY1B-GR2Q12269 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-OLQ12273 1755 aa9.15□□□□□ -0.95
APE3YBR286W TY1B-PLQ12414 1755 aaKnown RBP9.15□□□□□ -0.95
APE3YBR286W SMC4Q12267 1418 aa9.13□□□□□ -0.95
APE3YBR286W CHD1P32657 1468 aa9.13□□□□□ -0.95
APE3YBR286W MMS22Q06164 1454 aa9.1□□□□□ -0.95
APE3YBR286W YTA7P40340 1379 aa9.09□□□□□ -0.95
APE3YBR286W CDC25P04821 1589 aa9.09□□□□□ -0.95
APE3YBR286W MYO4P32492 1471 aa9.09□□□□□ -0.95
APE3YBR286W ESC1Q03661 1658 aaKnown RBP9.03□□□□□ -0.96
APE3YBR286W MTC1P47018 478 aaKnown RBP9.02□□□□□ -0.96
APE3YBR286W PAN1P32521 1480 aa8.99□□□□□ -0.97
APE3YBR286W SPP41P38904 1435 aa8.99□□□□□ -0.97
APE3YBR286W TY1B-JR2P47100 1755 aaKnown RBP8.99□□□□□ -0.97
APE3YBR286W TY1B-ER2Q03619 1755 aa8.99□□□□□ -0.97
APE3YBR286W TY1B-MR1Q04214 1755 aa8.99□□□□□ -0.97
APE3YBR286W TY1B-MR2Q04670 1755 aaKnown RBP8.99□□□□□ -0.97
APE3YBR286W TY1B-LR1Q12088 1755 aaKnown RBP8.99□□□□□ -0.97
APE3YBR286W TY1B-NL1Q12112 1755 aa8.99□□□□□ -0.97
APE3YBR286W TY1B-GR1Q12141 1755 aa8.99□□□□□ -0.97
APE3YBR286W TY1B-BLQ12490 1755 aa8.99□□□□□ -0.97
APE3YBR286W DNF1P32660 1571 aa8.97□□□□□ -0.97
APE3YBR286W RPA190P10964 1664 aaKnown RBP8.97□□□□□ -0.97
APE3YBR286W SNQ2P32568 1501 aaKnown RBP8.97□□□□□ -0.97
APE3YBR286W VTH1P40438 1549 aa8.96□□□□□ -0.97
APE3YBR286W VTH2P40890 1549 aa8.96□□□□□ -0.97
APE3YBR286W RQC2Q12532 1038 aaKnown RBP8.96□□□□□ -0.98
APE3YBR286W MLP2P40457 1679 aa8.96□□□□□ -0.98
APE3YBR286W TSC11P40061 1430 aa8.92□□□□□ -0.98
APE3YBR286W ULS1Q08562 1619 aa8.92□□□□□ -0.98
APE3YBR286W SAS10Q12136 610 aaPredicted RBP8.91□□□□□ -0.98
APE3YBR286W NTE1Q04958 1679 aa8.9□□□□□ -0.98
APE3YBR286W PDR15Q04182 1529 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms