RNA–Protein interactions for RNA: YBR234C

ARC40, Transcript of Subunit of the ARP2/3 complex, yeastyeast

Gene ARC40, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARC40YBR234C MTC1P47018 478 aaKnown RBP10.24□□□□□ -0.77
ARC40YBR234C DRS1P32892 752 aaKnown RBP10.09□□□□□ -0.79
ARC40YBR234C BFR2Q06631 534 aaKnown RBP8.66□□□□□ -1.02
ARC40YBR234C DIP2Q12220 943 aaPredicted RBP8.64□□□□□ -1.03
ARC40YBR234C FAP1P53971 965 aa8.63□□□□□ -1.03
ARC40YBR234C AVT3P36062 692 aa8.47□□□□□ -1.05
ARC40YBR234C ISW2Q08773 1120 aa8.39□□□□□ -1.07
ARC40YBR234C PRI1P10363 409 aa8.32□□□□□ -1.08
ARC40YBR234C RPG1P38249 964 aaKnown RBP8.26□□□□□ -1.09
ARC40YBR234C TFA1P36100 482 aa8.25□□□□□ -1.09
ARC40YBR234C RSE1Q04693 1361 aaKnown RBP8.23□□□□□ -1.09
ARC40YBR234C AAD16Q02895 342 aa8.21□□□□□ -1.1
ARC40YBR234C PRY3P47033 881 aa8.07□□□□□ -1.12
ARC40YBR234C RPL17AP05740 184 aaKnown RBP7.93□□□□□ -1.14
ARC40YBR234C RPL17BP46990 184 aaKnown RBP7.93□□□□□ -1.14
ARC40YBR234C TSR3Q12094 313 aaKnown RBP7.88□□□□□ -1.15
ARC40YBR234C REB1P21538 810 aa7.86□□□□□ -1.15
ARC40YBR234C RQC2Q12532 1038 aaKnown RBP7.76□□□□□ -1.17
ARC40YBR234C HAA1Q12753 694 aaKnown RBP7.61□□□□□ -1.19
ARC40YBR234C MRPL32P25348 183 aa7.6□□□□□ -1.19
ARC40YBR234C SPT21P35209 758 aa7.6□□□□□ -1.19
ARC40YBR234C YCK3P39962 524 aa7.57□□□□□ -1.2
ARC40YBR234C RIM101P33400 625 aa7.46□□□□□ -1.22
ARC40YBR234C YKR023WP36119 530 aaKnown RBP7.39□□□□□ -1.23
ARC40YBR234C CDC27P38042 758 aa7.28□□□□□ -1.24
ARC40YBR234C TAF7Q05021 590 aa7.28□□□□□ -1.24
ARC40YBR234C TFC8Q12308 588 aa7.25□□□□□ -1.25
ARC40YBR234C HOP09932 586 aa7.24□□□□□ -1.25
ARC40YBR234C SGS1P35187 1447 aa7.24□□□□□ -1.25
ARC40YBR234C OXP1P28273 1286 aa7.2□□□□□ -1.26
ARC40YBR234C DCD1P06773 312 aa7.19□□□□□ -1.26
ARC40YBR234C YIL055CP40523 627 aaKnown RBP7.15□□□□□ -1.26
ARC40YBR234C YGL015CP33199 130 aa7.13□□□□□ -1.27
ARC40YBR234C DMA1P38823 416 aa7.13□□□□□ -1.27
ARC40YBR234C PTP3P40048 928 aa7.12□□□□□ -1.27
ARC40YBR234C YAH1Q12184 172 aaKnown RBP7.1□□□□□ -1.27
ARC40YBR234C SSP1P38871 571 aa7.06□□□□□ -1.28
ARC40YBR234C UBP10P53874 792 aaPredicted RBP7.06□□□□□ -1.28
ARC40YBR234C SPA2P23201 1466 aaKnown RBP7.04□□□□□ -1.28
ARC40YBR234C SSN2P38931 1420 aa7.02□□□□□ -1.29
ARC40YBR234C BCH2P36122 765 aa7.02□□□□□ -1.29
ARC40YBR234C RSM7P47150 247 aa7.02□□□□□ -1.29
ARC40YBR234C MAP2P38174 421 aaKnown RBP7.01□□□□□ -1.29
ARC40YBR234C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
ARC40YBR234C YLR271WQ06152 274 aa6.98□□□□□ -1.29
ARC40YBR234C SCY1P53009 804 aa6.97□□□□□ -1.29
ARC40YBR234C AI2P03876 854 aa6.91□□□□□ -1.3
ARC40YBR234C EPS1P40557 701 aa6.91□□□□□ -1.3
ARC40YBR234C BBC1P47068 1157 aa6.91□□□□□ -1.3
ARC40YBR234C INO80P53115 1489 aa6.89□□□□□ -1.31
ARC40YBR234C SLX5P32828 619 aaKnown RBP6.87□□□□□ -1.31
ARC40YBR234C BDF1P35817 686 aa6.86□□□□□ -1.31
ARC40YBR234C MGA2P40578 1113 aa6.83□□□□□ -1.32
ARC40YBR234C LEO1P38439 464 aa6.82□□□□□ -1.32
ARC40YBR234C PSD2P53037 1138 aaKnown RBP6.82□□□□□ -1.32
ARC40YBR234C TIF4632P39936 914 aaKnown RBP6.77□□□□□ -1.33
ARC40YBR234C CST9Q06032 482 aa6.76□□□□□ -1.33
ARC40YBR234C TCB3Q03640 1545 aaKnown RBP6.71□□□□□ -1.33
ARC40YBR234C TGL3P40308 642 aa6.7□□□□□ -1.34
ARC40YBR234C MRM1P25270 412 aa6.69□□□□□ -1.34
ARC40YBR234C RTG3P38165 486 aa6.61□□□□□ -1.35
ARC40YBR234C SKI3P17883 1432 aaKnown RBP6.59□□□□□ -1.36
ARC40YBR234C NSR1P27476 414 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36 RIP-Chip
ARC40YBR234C TY1B-DR4Q07793 1604 aa6.54□□□□□ -1.36
ARC40YBR234C YAP5P40574 245 aa6.54□□□□□ -1.36
ARC40YBR234C RCR1P38212 213 aa6.53□□□□□ -1.36
ARC40YBR234C SPT6P23615 1451 aaKnown RBP6.53□□□□□ -1.36
ARC40YBR234C HSL1P34244 1518 aa6.52□□□□□ -1.37
ARC40YBR234C VPS29P38759 282 aa6.52□□□□□ -1.37
ARC40YBR234C LEU3P08638 886 aa6.51□□□□□ -1.37
ARC40YBR234C BUD31P25337 157 aaPredicted RBP6.51□□□□□ -1.37
ARC40YBR234C YMR1P47147 688 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
ARC40YBR234C YOR238WQ08634 303 aa6.51□□□□□ -1.37
ARC40YBR234C XRN1P22147 1528 aaKnown RBP6.5□□□□□ -1.37
ARC40YBR234C RAM2P29703 316 aa6.49□□□□□ -1.37
ARC40YBR234C MST1P07236 462 aa6.47□□□□□ -1.37
ARC40YBR234C DBP1P24784 617 aaKnown RBP6.45□□□□□ -1.38
ARC40YBR234C HIR3P47171 1648 aa6.44□□□□□ -1.38
ARC40YBR234C MAK11P20484 414 aaKnown RBP6.44□□□□□ -1.38
ARC40YBR234C SAS10Q12136 610 aaPredicted RBP6.44□□□□□ -1.38
ARC40YBR234C MMS22Q06164 1454 aa6.43□□□□□ -1.38
ARC40YBR234C STS1P38637 319 aa6.43□□□□□ -1.38
ARC40YBR234C YFR006WP43590 535 aa6.43□□□□□ -1.38
ARC40YBR234C PIB1Q06651 286 aa6.43□□□□□ -1.38
ARC40YBR234C TAF2P23255 1407 aa6.42□□□□□ -1.38
ARC40YBR234C GTT3P39996 337 aa6.4□□□□□ -1.38
ARC40YBR234C CHD1P32657 1468 aa6.4□□□□□ -1.39
ARC40YBR234C REV3P14284 1504 aa6.38□□□□□ -1.39
ARC40YBR234C UBP9P39967 754 aa6.37□□□□□ -1.39
ARC40YBR234C NOP2P40991 618 aaKnown RBP6.36□□□□□ -1.39
ARC40YBR234C DMA2P53924 522 aa6.36□□□□□ -1.39
ARC40YBR234C VMA1P17255 1071 aaKnown RBP6.35□□□□□ -1.39
ARC40YBR234C COQ8P27697 501 aa6.34□□□□□ -1.39
ARC40YBR234C MIF2P35201 549 aa6.34□□□□□ -1.39
ARC40YBR234C THO2P53552 1597 aaKnown RBP6.34□□□□□ -1.39
ARC40YBR234C SWR1Q05471 1514 aa6.32□□□□□ -1.4
ARC40YBR234C SET1P38827 1080 aaKnown RBP6.32□□□□□ -1.4
ARC40YBR234C SIN3P22579 1536 aa6.3□□□□□ -1.4
ARC40YBR234C SSK2P53599 1579 aa6.3□□□□□ -1.4
ARC40YBR234C YTA7P40340 1379 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms