RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C MON2P48563 1636 aaPredicted RBP20.12■□□□□ 0.81
SWC5YBR231C SGS1P35187 1447 aa20.1■□□□□ 0.81
SWC5YBR231C INO80P53115 1489 aa19.99■□□□□ 0.79
SWC5YBR231C TCB3Q03640 1545 aaKnown RBP19.91■□□□□ 0.78
SWC5YBR231C TY1B-DR4Q07793 1604 aa19.73■□□□□ 0.75
SWC5YBR231C SWR1Q05471 1514 aa19.46■□□□□ 0.71
SWC5YBR231C HSL1P34244 1518 aa19.21■□□□□ 0.67
SWC5YBR231C SPT6P23615 1451 aaKnown RBP19.15■□□□□ 0.66
SWC5YBR231C DNA2P38859 1522 aa19.05■□□□□ 0.64
SWC5YBR231C KOG1P38873 1557 aa19■□□□□ 0.63
SWC5YBR231C SPA2P23201 1466 aaKnown RBP18.99■□□□□ 0.63
SWC5YBR231C SSN2P38931 1420 aa18.95■□□□□ 0.62
SWC5YBR231C HIR3P47171 1648 aa18.82■□□□□ 0.6
SWC5YBR231C XRN1P22147 1528 aaKnown RBP18.57■□□□□ 0.56
SWC5YBR231C THO2P53552 1597 aaKnown RBP18.45■□□□□ 0.54
SWC5YBR231C BUD4P47136 1447 aa18.36■□□□□ 0.53
SWC5YBR231C REV3P14284 1504 aa18.33■□□□□ 0.53
SWC5YBR231C ECM5Q03214 1411 aa18.3■□□□□ 0.52
SWC5YBR231C DRS1P32892 752 aaKnown RBP18.28■□□□□ 0.52
SWC5YBR231C SIN3P22579 1536 aa18.25■□□□□ 0.51
SWC5YBR231C ATG2P53855 1592 aa18.1■□□□□ 0.49
SWC5YBR231C MDS3P53094 1487 aa18.09■□□□□ 0.49
SWC5YBR231C SSK2P53599 1579 aa18.08■□□□□ 0.49
SWC5YBR231C PEP1P32319 1579 aa18.04■□□□□ 0.48
SWC5YBR231C TAF2P23255 1407 aa17.94■□□□□ 0.46
SWC5YBR231C ESP1Q03018 1630 aa17.94■□□□□ 0.46
SWC5YBR231C MYO2P19524 1574 aaKnown RBP17.84■□□□□ 0.45
SWC5YBR231C RSE1Q04693 1361 aaKnown RBP17.82■□□□□ 0.44
SWC5YBR231C SKI3P17883 1432 aaKnown RBP17.81■□□□□ 0.44
SWC5YBR231C YPK9Q12697 1472 aa17.7■□□□□ 0.42
SWC5YBR231C SCC2Q04002 1493 aa17.57■□□□□ 0.4
SWC5YBR231C BPT1P14772 1559 aa17.55■□□□□ 0.4
SWC5YBR231C RPO31P04051 1460 aa17.49■□□□□ 0.39
SWC5YBR231C UFD4P33202 1483 aa17.48■□□□□ 0.39
SWC5YBR231C POL1P13382 1468 aa17.43■□□□□ 0.38
SWC5YBR231C YCF1P39109 1515 aaKnown RBP17.34■□□□□ 0.37
SWC5YBR231C TY2B-LR1P0C2J3 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-FP0CX63 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-GR2P0CX64 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-CP25384 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-DR2Q03494 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY1B-DR1Q03855 1755 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-DR3Q07791 1770 aaKnown RBP17.32■□□□□ 0.36
SWC5YBR231C TY2B-OR1Q12113 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-DR1Q12472 1770 aa17.32■□□□□ 0.36
SWC5YBR231C TY2B-OR2Q12501 1770 aa17.32■□□□□ 0.36
SWC5YBR231C RKR1Q04781 1562 aa17.32■□□□□ 0.36
SWC5YBR231C TOP2P06786 1428 aaKnown RBP17.3■□□□□ 0.36
SWC5YBR231C STU1P38198 1513 aa17.26■□□□□ 0.35
SWC5YBR231C YOR1P53049 1477 aa17.21■□□□□ 0.35
SWC5YBR231C MTC1P47018 478 aaKnown RBP17.21■□□□□ 0.35
SWC5YBR231C TY1B-DR3Q99231 1755 aa17.17■□□□□ 0.34
SWC5YBR231C SMC4Q12267 1418 aa17.16■□□□□ 0.34
SWC5YBR231C CDC25P04821 1589 aa17.15■□□□□ 0.34
SWC5YBR231C TY2B-BQ12491 1770 aa17.14■□□□□ 0.33
SWC5YBR231C TY1B-BRQ12193 1756 aa17.13■□□□□ 0.33
SWC5YBR231C TY1B-GR3Q12316 1755 aa17.13■□□□□ 0.33
SWC5YBR231C TY1B-ORQ92393 1755 aa17.13■□□□□ 0.33
SWC5YBR231C CHD1P32657 1468 aa17.12■□□□□ 0.33
SWC5YBR231C TY1B-HO13535 1793 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-DR5P0C2I2 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-DR6P0C2I3 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-LR2P0C2I5 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-LR3P0C2I6 1755 aaKnown RBP17.07■□□□□ 0.32
SWC5YBR231C TY1B-PR1P0C2I9 1755 aaKnown RBP17.07■□□□□ 0.32
SWC5YBR231C TY1B-PR2P0C2J0 1756 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-PR3P0C2J1 1755 aaKnown RBP17.07■□□□□ 0.32
SWC5YBR231C TY1B-JR1P47098 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-ML2Q03434 1755 aaKnown RBP17.07■□□□□ 0.32
SWC5YBR231C TY1B-ER1Q03612 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-ML1Q04711 1755 aaKnown RBP17.07■□□□□ 0.32
SWC5YBR231C TY1B-GR2Q12269 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-OLQ12273 1755 aa17.07■□□□□ 0.32
SWC5YBR231C TY1B-PLQ12414 1755 aaKnown RBP17.07■□□□□ 0.32
SWC5YBR231C YTA7P40340 1379 aa17.05■□□□□ 0.32
SWC5YBR231C MYO4P32492 1471 aa17.01■□□□□ 0.31
SWC5YBR231C PAN1P32521 1480 aa17■□□□□ 0.31
SWC5YBR231C MMS22Q06164 1454 aa16.99■□□□□ 0.31
SWC5YBR231C ESC1Q03661 1658 aaKnown RBP16.98■□□□□ 0.31
SWC5YBR231C SPP41P38904 1435 aa16.91■□□□□ 0.3
SWC5YBR231C RQC2Q12532 1038 aaKnown RBP16.9■□□□□ 0.3
SWC5YBR231C DNF1P32660 1571 aa16.89■□□□□ 0.29
SWC5YBR231C RPA190P10964 1664 aaKnown RBP16.85■□□□□ 0.29
SWC5YBR231C VTH1P40438 1549 aa16.8■□□□□ 0.28
SWC5YBR231C VTH2P40890 1549 aa16.8■□□□□ 0.28
SWC5YBR231C TSC11P40061 1430 aa16.79■□□□□ 0.28
SWC5YBR231C TRM732Q03496 1420 aa16.77■□□□□ 0.27
SWC5YBR231C TY1B-JR2P47100 1755 aaKnown RBP16.77■□□□□ 0.27
SWC5YBR231C TY1B-ER2Q03619 1755 aa16.77■□□□□ 0.27
SWC5YBR231C TY1B-MR1Q04214 1755 aa16.77■□□□□ 0.27
SWC5YBR231C TY1B-MR2Q04670 1755 aaKnown RBP16.77■□□□□ 0.27
SWC5YBR231C TY1B-LR1Q12088 1755 aaKnown RBP16.77■□□□□ 0.27
SWC5YBR231C TY1B-NL1Q12112 1755 aa16.77■□□□□ 0.27
SWC5YBR231C TY1B-GR1Q12141 1755 aa16.77■□□□□ 0.27
SWC5YBR231C TY1B-BLQ12490 1755 aa16.77■□□□□ 0.27
SWC5YBR231C MET5P47169 1442 aa16.74■□□□□ 0.27
SWC5YBR231C NTE1Q04958 1679 aa16.69■□□□□ 0.26
SWC5YBR231C SNQ2P32568 1501 aaKnown RBP16.68■□□□□ 0.26
SWC5YBR231C RPO21P04050 1733 aaKnown RBP16.62■□□□□ 0.25
SWC5YBR231C MLP2P40457 1679 aa16.61■□□□□ 0.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms