RNA–Protein interactions for RNA: YBR183W

YPC1, Transcript of Alkaline ceramidase, yeastyeast

Gene YPC1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPC1YBR183W SGS1P35187 1447 aa13.47□□□□□ -0.25
YPC1YBR183W INO80P53115 1489 aa13.32□□□□□ -0.28
YPC1YBR183W TCB3Q03640 1545 aaKnown RBP13.13□□□□□ -0.31
YPC1YBR183W TY1B-DR4Q07793 1604 aa13.04□□□□□ -0.32
YPC1YBR183W MON2P48563 1636 aaPredicted RBP12.99□□□□□ -0.33
YPC1YBR183W SPA2P23201 1466 aaKnown RBP12.97□□□□□ -0.33
YPC1YBR183W SSN2P38931 1420 aa12.87□□□□□ -0.35
YPC1YBR183W HSL1P34244 1518 aa12.73□□□□□ -0.37
YPC1YBR183W SWR1Q05471 1514 aa12.69□□□□□ -0.38
YPC1YBR183W SPT6P23615 1451 aaKnown RBP12.65□□□□□ -0.38
YPC1YBR183W HIR3P47171 1648 aa12.49□□□□□ -0.41
YPC1YBR183W DRS1P32892 752 aaKnown RBP12.36□□□□□ -0.43
YPC1YBR183W XRN1P22147 1528 aaKnown RBP12.35□□□□□ -0.43
YPC1YBR183W DNA2P38859 1522 aa12.28□□□□□ -0.44
YPC1YBR183W KOG1P38873 1557 aa12.28□□□□□ -0.44
YPC1YBR183W REV3P14284 1504 aa12.23□□□□□ -0.45
YPC1YBR183W SIN3P22579 1536 aa12.21□□□□□ -0.45
YPC1YBR183W THO2P53552 1597 aaKnown RBP12.17□□□□□ -0.46
YPC1YBR183W SSK2P53599 1579 aa12.11□□□□□ -0.47
YPC1YBR183W BUD4P47136 1447 aa12.03□□□□□ -0.48
YPC1YBR183W ESP1Q03018 1630 aa12.01□□□□□ -0.49
YPC1YBR183W ATG2P53855 1592 aa11.99□□□□□ -0.49
YPC1YBR183W MYO2P19524 1574 aaKnown RBP11.95□□□□□ -0.5
YPC1YBR183W ECM5Q03214 1411 aa11.94□□□□□ -0.5
YPC1YBR183W TAF2P23255 1407 aa11.92□□□□□ -0.5
YPC1YBR183W PEP1P32319 1579 aa11.89□□□□□ -0.51
YPC1YBR183W MDS3P53094 1487 aa11.85□□□□□ -0.51
YPC1YBR183W YPK9Q12697 1472 aa11.81□□□□□ -0.52
YPC1YBR183W SKI3P17883 1432 aaKnown RBP11.77□□□□□ -0.53
YPC1YBR183W MTC1P47018 478 aaKnown RBP11.76□□□□□ -0.53
YPC1YBR183W POL1P13382 1468 aa11.74□□□□□ -0.53
YPC1YBR183W SCC2Q04002 1493 aa11.7□□□□□ -0.54
YPC1YBR183W CHD1P32657 1468 aa11.65□□□□□ -0.54
YPC1YBR183W RPO31P04051 1460 aa11.64□□□□□ -0.55
YPC1YBR183W STU1P38198 1513 aa11.62□□□□□ -0.55
YPC1YBR183W RKR1Q04781 1562 aa11.61□□□□□ -0.55
YPC1YBR183W TY2B-LR1P0C2J3 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-FP0CX63 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-GR2P0CX64 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-CP25384 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-DR2Q03494 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY1B-DR1Q03855 1755 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-DR3Q07791 1770 aaKnown RBP11.56□□□□□ -0.56
YPC1YBR183W TY2B-OR1Q12113 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-DR1Q12472 1770 aa11.56□□□□□ -0.56
YPC1YBR183W TY2B-OR2Q12501 1770 aa11.56□□□□□ -0.56
YPC1YBR183W YOR1P53049 1477 aa11.56□□□□□ -0.56
YPC1YBR183W YCF1P39109 1515 aaKnown RBP11.55□□□□□ -0.56
YPC1YBR183W UFD4P33202 1483 aa11.55□□□□□ -0.56
YPC1YBR183W MMS22Q06164 1454 aa11.54□□□□□ -0.56
YPC1YBR183W TOP2P06786 1428 aaKnown RBP11.53□□□□□ -0.56
YPC1YBR183W YTA7P40340 1379 aa11.52□□□□□ -0.57
YPC1YBR183W TY1B-DR3Q99231 1755 aa11.5□□□□□ -0.57
YPC1YBR183W BPT1P14772 1559 aa11.5□□□□□ -0.57
YPC1YBR183W SMC4Q12267 1418 aa11.49□□□□□ -0.57
YPC1YBR183W MYO4P32492 1471 aa11.47□□□□□ -0.57
YPC1YBR183W TY2B-BQ12491 1770 aa11.46□□□□□ -0.58
YPC1YBR183W TY1B-BRQ12193 1756 aa11.4□□□□□ -0.58
YPC1YBR183W TY1B-GR3Q12316 1755 aa11.4□□□□□ -0.58
YPC1YBR183W TY1B-ORQ92393 1755 aa11.4□□□□□ -0.58
YPC1YBR183W TY1B-HO13535 1793 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-DR5P0C2I2 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-DR6P0C2I3 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-LR2P0C2I5 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-LR3P0C2I6 1755 aaKnown RBP11.39□□□□□ -0.59
YPC1YBR183W TY1B-PR1P0C2I9 1755 aaKnown RBP11.39□□□□□ -0.59
YPC1YBR183W TY1B-PR2P0C2J0 1756 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-PR3P0C2J1 1755 aaKnown RBP11.39□□□□□ -0.59
YPC1YBR183W TY1B-JR1P47098 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-ML2Q03434 1755 aaKnown RBP11.39□□□□□ -0.59
YPC1YBR183W TY1B-ER1Q03612 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-ML1Q04711 1755 aaKnown RBP11.39□□□□□ -0.59
YPC1YBR183W TY1B-GR2Q12269 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-OLQ12273 1755 aa11.39□□□□□ -0.59
YPC1YBR183W TY1B-PLQ12414 1755 aaKnown RBP11.39□□□□□ -0.59
YPC1YBR183W CDC25P04821 1589 aa11.31□□□□□ -0.6
YPC1YBR183W SNQ2P32568 1501 aaKnown RBP11.27□□□□□ -0.61
YPC1YBR183W SPP41P38904 1435 aa11.25□□□□□ -0.61
YPC1YBR183W MLP2P40457 1679 aa11.24□□□□□ -0.61
YPC1YBR183W RSE1Q04693 1361 aaKnown RBP11.23□□□□□ -0.61
YPC1YBR183W PAN1P32521 1480 aa11.21□□□□□ -0.61
YPC1YBR183W VTH1P40438 1549 aa11.19□□□□□ -0.62
YPC1YBR183W VTH2P40890 1549 aa11.19□□□□□ -0.62
YPC1YBR183W TY1B-JR2P47100 1755 aaKnown RBP11.19□□□□□ -0.62
YPC1YBR183W TY1B-ER2Q03619 1755 aa11.19□□□□□ -0.62
YPC1YBR183W TY1B-MR1Q04214 1755 aa11.19□□□□□ -0.62
YPC1YBR183W TY1B-MR2Q04670 1755 aaKnown RBP11.19□□□□□ -0.62
YPC1YBR183W TY1B-LR1Q12088 1755 aaKnown RBP11.19□□□□□ -0.62
YPC1YBR183W TY1B-NL1Q12112 1755 aa11.19□□□□□ -0.62
YPC1YBR183W TY1B-GR1Q12141 1755 aa11.19□□□□□ -0.62
YPC1YBR183W TY1B-BLQ12490 1755 aa11.19□□□□□ -0.62
YPC1YBR183W ESC1Q03661 1658 aaKnown RBP11.18□□□□□ -0.62
YPC1YBR183W TSC11P40061 1430 aa11.18□□□□□ -0.62
YPC1YBR183W ULS1Q08562 1619 aa11.17□□□□□ -0.62
YPC1YBR183W SAS10Q12136 610 aaPredicted RBP11.16□□□□□ -0.62
YPC1YBR183W STH1P32597 1359 aa11.16□□□□□ -0.62
YPC1YBR183W PDR15Q04182 1529 aaKnown RBP11.15□□□□□ -0.62
YPC1YBR183W RPA190P10964 1664 aaKnown RBP11.14□□□□□ -0.63
YPC1YBR183W TAF7Q05021 590 aa11.13□□□□□ -0.63
YPC1YBR183W DNF1P32660 1571 aa11.11□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms