RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A FAP1P53971 965 aa11.26□□□□□ -0.61
SUS1YBR111W-A MTC1P47018 478 aaKnown RBP10.94□□□□□ -0.66
SUS1YBR111W-A DRS1P32892 752 aaKnown RBP10.91□□□□□ -0.66
SUS1YBR111W-A PRY3P47033 881 aa10.66□□□□□ -0.7
SUS1YBR111W-A YCK3P39962 524 aa10.02□□□□□ -0.81
SUS1YBR111W-A AAD16Q02895 342 aa9.94□□□□□ -0.82
SUS1YBR111W-A HAA1Q12753 694 aaKnown RBP9.85□□□□□ -0.83
SUS1YBR111W-A PRI1P10363 409 aa9.83□□□□□ -0.84
SUS1YBR111W-A BFR2Q06631 534 aaKnown RBP9.41□□□□□ -0.9
SUS1YBR111W-A DIP2Q12220 943 aaPredicted RBP9.3□□□□□ -0.92
SUS1YBR111W-A TSR3Q12094 313 aaKnown RBP9.24□□□□□ -0.93
SUS1YBR111W-A ISW2Q08773 1120 aa9.2□□□□□ -0.94
SUS1YBR111W-A AVT3P36062 692 aa9.16□□□□□ -0.94
SUS1YBR111W-A RPG1P38249 964 aaKnown RBP9.16□□□□□ -0.94
SUS1YBR111W-A MRPL32P25348 183 aa8.86□□□□□ -0.99
SUS1YBR111W-A YGL015CP33199 130 aa8.86□□□□□ -0.99
SUS1YBR111W-A RSE1Q04693 1361 aaKnown RBP8.81□□□□□ -1
SUS1YBR111W-A TFA1P36100 482 aa8.78□□□□□ -1
SUS1YBR111W-A BUD31P25337 157 aaPredicted RBP8.77□□□□□ -1.01
SUS1YBR111W-A RPL17AP05740 184 aaKnown RBP8.5□□□□□ -1.05
SUS1YBR111W-A RPL17BP46990 184 aaKnown RBP8.5□□□□□ -1.05
SUS1YBR111W-A REB1P21538 810 aa8.39□□□□□ -1.07
SUS1YBR111W-A SIS1P25294 352 aaKnown RBP8.23□□□□□ -1.09
SUS1YBR111W-A CDC27P38042 758 aa8.21□□□□□ -1.1
SUS1YBR111W-A SPT21P35209 758 aa8.17□□□□□ -1.1
SUS1YBR111W-A UBP10P53874 792 aaPredicted RBP8.13□□□□□ -1.11
SUS1YBR111W-A MAP2P38174 421 aaKnown RBP8.1□□□□□ -1.11
SUS1YBR111W-A RIM101P33400 625 aa8.02□□□□□ -1.13
SUS1YBR111W-A UBP9P39967 754 aa7.94□□□□□ -1.14
SUS1YBR111W-A YKR023WP36119 530 aaKnown RBP7.91□□□□□ -1.14
SUS1YBR111W-A OXP1P28273 1286 aa7.78□□□□□ -1.16
SUS1YBR111W-A TIF4632P39936 914 aaKnown RBP7.78□□□□□ -1.16
SUS1YBR111W-A HOP09932 586 aa7.77□□□□□ -1.17
SUS1YBR111W-A TGL3P40308 642 aa7.77□□□□□ -1.17
SUS1YBR111W-A TFC8Q12308 588 aa7.76□□□□□ -1.17
SUS1YBR111W-A PTP3P40048 928 aa7.73□□□□□ -1.17
SUS1YBR111W-A DCD1P06773 312 aa7.71□□□□□ -1.18
SUS1YBR111W-A SCY1P53009 804 aa7.69□□□□□ -1.18
SUS1YBR111W-A YAH1Q12184 172 aaKnown RBP7.68□□□□□ -1.18
SUS1YBR111W-A YIL055CP40523 627 aaKnown RBP7.67□□□□□ -1.18
SUS1YBR111W-A SLX5P32828 619 aaKnown RBP7.66□□□□□ -1.18
SUS1YBR111W-A SSP1P38871 571 aa7.64□□□□□ -1.19
SUS1YBR111W-A YLR271WQ06152 274 aa7.56□□□□□ -1.2
SUS1YBR111W-A RSM7P47150 247 aa7.55□□□□□ -1.2
SUS1YBR111W-A BCH2P36122 765 aa7.53□□□□□ -1.2
SUS1YBR111W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SUS1YBR111W-A AI2P03876 854 aa7.44□□□□□ -1.22
SUS1YBR111W-A YBL029C-AQ3E756 94 aa7.42□□□□□ -1.22
SUS1YBR111W-A EPS1P40557 701 aa7.4□□□□□ -1.22
SUS1YBR111W-A BBC1P47068 1157 aa7.39□□□□□ -1.23
SUS1YBR111W-A MGA2P40578 1113 aa7.37□□□□□ -1.23
SUS1YBR111W-A PSD2P53037 1138 aaKnown RBP7.36□□□□□ -1.23
SUS1YBR111W-A BDF1P35817 686 aa7.34□□□□□ -1.23
SUS1YBR111W-A RQC2Q12532 1038 aaKnown RBP7.34□□□□□ -1.23
SUS1YBR111W-A CST9Q06032 482 aa7.33□□□□□ -1.24
SUS1YBR111W-A MST1P07236 462 aa7.29□□□□□ -1.24
SUS1YBR111W-A VNX1P42839 908 aa7.26□□□□□ -1.25
SUS1YBR111W-A MRM1P25270 412 aa7.21□□□□□ -1.26
SUS1YBR111W-A DMA1P38823 416 aa7.2□□□□□ -1.26
SUS1YBR111W-A AIR2Q12476 344 aaKnown RBP7.2□□□□□ -1.26
SUS1YBR111W-A YOR238WQ08634 303 aa7.19□□□□□ -1.26
SUS1YBR111W-A SPP1Q03012 353 aa7.18□□□□□ -1.26
SUS1YBR111W-A YJL171CP46992 396 aa7.17□□□□□ -1.26
SUS1YBR111W-A FKH1P40466 484 aa7.14□□□□□ -1.27
SUS1YBR111W-A RTG3P38165 486 aa7.09□□□□□ -1.27
SUS1YBR111W-A RCR1P38212 213 aa7.09□□□□□ -1.27
SUS1YBR111W-A WSC3Q12215 556 aa7.08□□□□□ -1.28
SUS1YBR111W-A RAM2P29703 316 aa7.05□□□□□ -1.28
SUS1YBR111W-A NSR1P27476 414 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
SUS1YBR111W-A VPS29P38759 282 aa7.02□□□□□ -1.29
SUS1YBR111W-A TIF11P38912 153 aaKnown RBP7.02□□□□□ -1.29
SUS1YBR111W-A YMR1P47147 688 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
SUS1YBR111W-A BMT6Q12291 365 aa6.97□□□□□ -1.29
SUS1YBR111W-A YAP5P40574 245 aa6.96□□□□□ -1.3
SUS1YBR111W-A MAK11P20484 414 aaKnown RBP6.95□□□□□ -1.3
SUS1YBR111W-A STS1P38637 319 aa6.94□□□□□ -1.3
SUS1YBR111W-A DBP1P24784 617 aaKnown RBP6.93□□□□□ -1.3
SUS1YBR111W-A YFR006WP43590 535 aa6.93□□□□□ -1.3
SUS1YBR111W-A LDB19Q12502 818 aa6.93□□□□□ -1.3
SUS1YBR111W-A PIB1Q06651 286 aa6.91□□□□□ -1.3
SUS1YBR111W-A SET1P38827 1080 aaKnown RBP6.88□□□□□ -1.31
SUS1YBR111W-A IOC2Q12072 812 aa6.86□□□□□ -1.31
SUS1YBR111W-A COQ8P27697 501 aa6.85□□□□□ -1.31
SUS1YBR111W-A GTT3P39996 337 aa6.85□□□□□ -1.31
SUS1YBR111W-A MIF2P35201 549 aa6.84□□□□□ -1.31
SUS1YBR111W-A ULI1P43604 169 aa6.84□□□□□ -1.31
SUS1YBR111W-A SAS10Q12136 610 aaPredicted RBP6.83□□□□□ -1.32
SUS1YBR111W-A EDS1P38073 919 aa6.81□□□□□ -1.32
SUS1YBR111W-A VMA1P17255 1071 aaKnown RBP6.8□□□□□ -1.32
SUS1YBR111W-A IFH1P39520 1085 aa6.76□□□□□ -1.33
SUS1YBR111W-A YPR148CQ06523 435 aa6.76□□□□□ -1.33
SUS1YBR111W-A PTC3P34221 468 aaKnown RBP6.75□□□□□ -1.33
SUS1YBR111W-A NOP53Q12080 455 aaKnown RBP6.75□□□□□ -1.33
SUS1YBR111W-A VPS70P47161 811 aa6.73□□□□□ -1.33
SUS1YBR111W-A SAM3Q08986 587 aa6.73□□□□□ -1.33
SUS1YBR111W-A YOL036WQ08206 761 aa6.69□□□□□ -1.34
SUS1YBR111W-A GRE2Q12068 342 aaKnown RBP6.69□□□□□ -1.34
SUS1YBR111W-A RTG1P32607 177 aa6.67□□□□□ -1.34
SUS1YBR111W-A SET4P42948 560 aa6.67□□□□□ -1.34
SUS1YBR111W-A ATH1P48016 1211 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms